RNA–Protein interactions for RNA: ENST00000393747.3

CTTN-204, Transcript of cortactin, humanhuman

TSL 5

Gene CTTN, Length 1,315 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-204ENST00000393747 ZNF185O15231 689 aa17.3■□□□□ 0.36
CTTN-204ENST00000393747 PRICKLE3O43900 615 aaPredicted RBP17.3■□□□□ 0.36
CTTN-204ENST00000393747 ATXN8OSP0DMR3 200 aa17.3■□□□□ 0.36
CTTN-204ENST00000393747 AGXTP21549 392 aa17.3■□□□□ 0.36
CTTN-204ENST00000393747 RPS3P23396 243 aaKnown RBP eCLIP17.3■□□□□ 0.36
CTTN-204ENST00000393747 CXCR5P32302 372 aa17.3■□□□□ 0.36
CTTN-204ENST00000393747 PPARGP37231 505 aaPredicted RBP17.3■□□□□ 0.36
CTTN-204ENST00000393747 UQCRFS1P47985 274 aa17.3■□□□□ 0.36
CTTN-204ENST00000393747 SLC9A5Q14940 896 aa17.3■□□□□ 0.36
CTTN-204ENST00000393747 MLIPQ5VWP3 458 aa17.3■□□□□ 0.36
CTTN-204ENST00000393747 FCRL6Q6DN72 434 aa17.3■□□□□ 0.36
CTTN-204ENST00000393747 PTRHD1Q6GMV3 140 aaKnown RBP17.3■□□□□ 0.36
CTTN-204ENST00000393747 MRPL14Q6P1L8 145 aaKnown RBP17.3■□□□□ 0.36
CTTN-204ENST00000393747 MPP5Q8N3R9 675 aa17.3■□□□□ 0.36
CTTN-204ENST00000393747 TMEM102Q8N9M5 508 aaPredicted RBP17.3■□□□□ 0.36
CTTN-204ENST00000393747 OR2L8Q8NGY9 312 aa17.3■□□□□ 0.36
CTTN-204ENST00000393747 DENND1AQ8TEH3 1009 aa17.3■□□□□ 0.36
CTTN-204ENST00000393747 TSSK1BQ9BXA7 367 aa17.3■□□□□ 0.36
CTTN-204ENST00000393747 ANKMY1Q9P2S6 941 aa17.3■□□□□ 0.36
CTTN-204ENST00000393747 NAV2Q8IVL1 2488 aa17.3■□□□□ 0.36
CTTN-204ENST00000393747 TNRC6AQ8NDV7 1962 aaKnown RBP17.29■□□□□ 0.36
CTTN-204ENST00000393747 RASGRF2O14827 1237 aa17.29■□□□□ 0.36
CTTN-204ENST00000393747 KDM1AO60341 852 aa17.29■□□□□ 0.36
CTTN-204ENST00000393747 S1PR4O95977 384 aa17.29■□□□□ 0.36
CTTN-204ENST00000393747 UMODP07911 640 aa17.29■□□□□ 0.36
CTTN-204ENST00000393747 CCDC175P0C221 793 aa17.29■□□□□ 0.36
CTTN-204ENST00000393747 OTX2P32243 289 aa17.29■□□□□ 0.36
CTTN-204ENST00000393747 BDKRB1P46663 353 aa17.29■□□□□ 0.36
CTTN-204ENST00000393747 NPY2RP49146 381 aa17.29■□□□□ 0.36
CTTN-204ENST00000393747 DCDP81605 110 aaKnown RBP17.29■□□□□ 0.36
CTTN-204ENST00000393747 CCZ1BP86790 482 aa17.29■□□□□ 0.36
CTTN-204ENST00000393747 CCZ1P86791 482 aaPredicted RBP17.29■□□□□ 0.36
CTTN-204ENST00000393747 TYSND1Q2T9J0 566 aa17.29■□□□□ 0.36
CTTN-204ENST00000393747 NKAIN1Q4KMZ8 207 aa17.29■□□□□ 0.36
CTTN-204ENST00000393747 TLDC1Q6P9B6 456 aa17.29■□□□□ 0.36
CTTN-204ENST00000393747 LRRC8BQ6P9F7 803 aa17.29■□□□□ 0.36
CTTN-204ENST00000393747 C4orf22Q6V702 233 aa17.29■□□□□ 0.36
CTTN-204ENST00000393747 MED25Q71SY5 747 aa17.29■□□□□ 0.36
CTTN-204ENST00000393747 MCATQ8IVS2 390 aaKnown RBP17.29■□□□□ 0.36
CTTN-204ENST00000393747 Q8NA96 180 aa17.29■□□□□ 0.36
CTTN-204ENST00000393747 LPGAT1Q92604 370 aa17.29■□□□□ 0.36
CTTN-204ENST00000393747 TRIM56Q9BRZ2 755 aaKnown RBP17.29■□□□□ 0.36
CTTN-204ENST00000393747 MRM3Q9HC36 420 aaKnown RBP17.29■□□□□ 0.36
CTTN-204ENST00000393747 BFARQ9NZS9 450 aa17.29■□□□□ 0.36
CTTN-204ENST00000393747 GNPTGQ9UJJ9 305 aa17.29■□□□□ 0.36
CTTN-204ENST00000393747 ANAPC5Q9UJX4 755 aa17.29■□□□□ 0.36
CTTN-204ENST00000393747 TTC7AQ9ULT0 858 aaPredicted RBP17.29■□□□□ 0.36
CTTN-204ENST00000393747 SRPK3Q9UPE1 567 aa17.29■□□□□ 0.36
CTTN-204ENST00000393747 PADI2Q9Y2J8 665 aa17.29■□□□□ 0.36
CTTN-204ENST00000393747 PTRH2Q9Y3E5 179 aaKnown RBP17.29■□□□□ 0.36
CTTN-204ENST00000393747 USP9YO00507 2555 aaPredicted RBP17.29■□□□□ 0.36
CTTN-204ENST00000393747 A6NL46 340 aa17.28■□□□□ 0.36
CTTN-204ENST00000393747 GOLGA8KD6RF30 607 aa17.28■□□□□ 0.36
CTTN-204ENST00000393747 GOLGA8TH3BQL2 631 aa17.28■□□□□ 0.36
CTTN-204ENST00000393747 MASP2O00187 686 aa17.28■□□□□ 0.36
CTTN-204ENST00000393747 CEP104O60308 925 aa17.28■□□□□ 0.36
CTTN-204ENST00000393747 NRP2O60462 931 aa17.28■□□□□ 0.36
CTTN-204ENST00000393747 VAPBO95292 243 aa17.28■□□□□ 0.36
CTTN-204ENST00000393747 C1orf105O95561 183 aa17.28■□□□□ 0.36
CTTN-204ENST00000393747 RPN2P04844 631 aa17.28■□□□□ 0.36
CTTN-204ENST00000393747 TPSB2P20231 275 aa17.28■□□□□ 0.36
CTTN-204ENST00000393747 PSMB5P28074 263 aa17.28■□□□□ 0.36
CTTN-204ENST00000393747 GRIA3P42263 894 aa17.28■□□□□ 0.36
CTTN-204ENST00000393747 EIF3BP55884 814 aaKnown RBP17.28■□□□□ 0.36
CTTN-204ENST00000393747 RAPSNQ13702 412 aa17.28■□□□□ 0.36
CTTN-204ENST00000393747 GBX1Q14549 363 aa17.28■□□□□ 0.36
CTTN-204ENST00000393747 KCNJ11Q14654 390 aa17.28■□□□□ 0.36
CTTN-204ENST00000393747 TMED2Q15363 201 aa17.28■□□□□ 0.36
CTTN-204ENST00000393747 TRIP13Q15645 432 aaPredicted RBP17.28■□□□□ 0.36
CTTN-204ENST00000393747 TPSAB1Q15661 275 aa17.28■□□□□ 0.36
CTTN-204ENST00000393747 PRR30Q53SZ7 412 aaPredicted RBP17.28■□□□□ 0.36
CTTN-204ENST00000393747 GSTA5Q7RTV2 222 aa17.28■□□□□ 0.36
CTTN-204ENST00000393747 LRRC6Q86X45 466 aa17.28■□□□□ 0.36
CTTN-204ENST00000393747 RAB43Q86YS6 212 aa17.28■□□□□ 0.36
CTTN-204ENST00000393747 LRRC8AQ8IWT6 810 aa17.28■□□□□ 0.36
CTTN-204ENST00000393747 RBMXL3Q8N7X1 1067 aaKnown RBP17.28■□□□□ 0.36
CTTN-204ENST00000393747 OR2Y1Q8NGV0 311 aa17.28■□□□□ 0.36
CTTN-204ENST00000393747 ZNF285Q96NJ3 590 aa17.28■□□□□ 0.36
CTTN-204ENST00000393747 PANX3Q96QZ0 392 aa17.28■□□□□ 0.36
CTTN-204ENST00000393747 SMAD5Q99717 465 aaKnown RBP17.28■□□□□ 0.36
CTTN-204ENST00000393747 ENAMQ9NRM1 1142 aa17.28■□□□□ 0.36
CTTN-204ENST00000393747 LUZP4Q9P127 313 aa17.28■□□□□ 0.36
CTTN-204ENST00000393747 IFT80Q9P2H3 777 aaPredicted RBP17.28■□□□□ 0.36
CTTN-204ENST00000393747 SOX13Q9UN79 622 aa17.28■□□□□ 0.36
CTTN-204ENST00000393747 ZNF451Q9Y4E5 1061 aa17.28■□□□□ 0.36
CTTN-204ENST00000393747 PCDHGB7Q9Y5F8 929 aa17.28■□□□□ 0.36
CTTN-204ENST00000393747 SNRNP200O75643 2136 aaKnown RBP17.28■□□□□ 0.36
CTTN-204ENST00000393747 TTLL8A6PVC2 850 aa17.27■□□□□ 0.36
CTTN-204ENST00000393747 CTSVO60911 334 aa17.27■□□□□ 0.36
CTTN-204ENST00000393747 NIPSNAP2O75323 286 aa17.27■□□□□ 0.36
CTTN-204ENST00000393747 AVILO75366 819 aa17.27■□□□□ 0.36
CTTN-204ENST00000393747 NDUFS3O75489 264 aa17.27■□□□□ 0.36
CTTN-204ENST00000393747 MCM3P25205 808 aa17.27■□□□□ 0.36
CTTN-204ENST00000393747 MAGEA6P43360 314 aa17.27■□□□□ 0.36
CTTN-204ENST00000393747 SSPNQ14714 243 aa17.27■□□□□ 0.36
CTTN-204ENST00000393747 ANKRD22Q5VYY1 191 aa17.27■□□□□ 0.36
CTTN-204ENST00000393747 TTC27Q6P3X3 843 aa17.27■□□□□ 0.36
CTTN-204ENST00000393747 PPP1R32Q7Z5V6 425 aa17.27■□□□□ 0.36
CTTN-204ENST00000393747 SPNS2Q8IVW8 549 aa17.27■□□□□ 0.36
CTTN-204ENST00000393747 DTWD1Q8N5C7 304 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 148.3 ms