RNA–Protein interactions for RNA: ENST00000392003.6

COL6A3-204, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2 BASIC

Gene COL6A3, Length 3,464 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-204ENST00000392003 H3BNH8 94 aa9.43□□□□□ -0.9
COL6A3-204ENST00000392003 CLOCKO15516 846 aa9.43□□□□□ -0.9
COL6A3-204ENST00000392003 DEAF1O75398 565 aaPredicted RBP9.43□□□□□ -0.9
COL6A3-204ENST00000392003 WDR47O94967 919 aa9.43□□□□□ -0.9
COL6A3-204ENST00000392003 CRYZL1O95825 349 aa9.43□□□□□ -0.9
COL6A3-204ENST00000392003 ANXA6P08133 673 aa9.43□□□□□ -0.9
COL6A3-204ENST00000392003 HIST1H2AGP0C0S8 130 aaPredicted RBP9.43□□□□□ -0.9
COL6A3-204ENST00000392003 OR56A5P0C7T3 313 aa9.43□□□□□ -0.9
COL6A3-204ENST00000392003 C7P10643 843 aa9.43□□□□□ -0.9
COL6A3-204ENST00000392003 HIST1H2ADP20671 130 aa9.43□□□□□ -0.9
COL6A3-204ENST00000392003 NR4A1P22736 598 aa9.43□□□□□ -0.9
COL6A3-204ENST00000392003 OXTRP30559 389 aa9.43□□□□□ -0.9
COL6A3-204ENST00000392003 MNX1P50219 401 aaPredicted RBP9.43□□□□□ -0.9
COL6A3-204ENST00000392003 CHRNB3Q05901 458 aa9.43□□□□□ -0.9
COL6A3-204ENST00000392003 MERTKQ12866 999 aa9.43□□□□□ -0.9
COL6A3-204ENST00000392003 TRAF3Q13114 568 aa9.43□□□□□ -0.9
COL6A3-204ENST00000392003 PPIGQ13427 754 aaKnown RBP eCLIP9.43□□□□□ -0.9
COL6A3-204ENST00000392003 MAPKAPK3Q16644 382 aa9.43□□□□□ -0.9
COL6A3-204ENST00000392003 C1orf53Q5VUE5 145 aa9.43□□□□□ -0.9
COL6A3-204ENST00000392003 TPRG1Q6ZUI0 275 aa9.43□□□□□ -0.9
COL6A3-204ENST00000392003 UTS2BQ765I0 119 aa9.43□□□□□ -0.9
COL6A3-204ENST00000392003 TMEM150AQ86TG1 271 aa9.43□□□□□ -0.9
COL6A3-204ENST00000392003 BBS7Q8IWZ6 715 aa9.43□□□□□ -0.9
COL6A3-204ENST00000392003 CPXM2Q8N436 756 aa9.43□□□□□ -0.9
COL6A3-204ENST00000392003 SDCCAG3Q96C92 435 aa9.43□□□□□ -0.9
COL6A3-204ENST00000392003 BIRC7Q96CA5 298 aa9.43□□□□□ -0.9
COL6A3-204ENST00000392003 ZNF689Q96CS4 500 aaPredicted RBP9.43□□□□□ -0.9
COL6A3-204ENST00000392003 HIST1H2AHQ96KK5 128 aa9.43□□□□□ -0.9
COL6A3-204ENST00000392003 HIST1H2AJQ99878 128 aa9.43□□□□□ -0.9
COL6A3-204ENST00000392003 H2AFJQ9BTM1 129 aa9.43□□□□□ -0.9
COL6A3-204ENST00000392003 SMG9Q9H0W8 520 aaKnown RBP9.43□□□□□ -0.9
COL6A3-204ENST00000392003 ACTR8Q9H981 624 aa9.43□□□□□ -0.9
COL6A3-204ENST00000392003 PALMDQ9NP74 551 aa9.43□□□□□ -0.9
COL6A3-204ENST00000392003 WBP1LQ9NX94 342 aa9.43□□□□□ -0.9
COL6A3-204ENST00000392003 DCAF16Q9NXF7 216 aa9.43□□□□□ -0.9
COL6A3-204ENST00000392003 SLC25A13Q9UJS0 675 aa9.43□□□□□ -0.9
COL6A3-204ENST00000392003 ZNF490Q9ULM2 529 aaPredicted RBP9.43□□□□□ -0.9
COL6A3-204ENST00000392003 PRSS21Q9Y6M0 314 aa9.43□□□□□ -0.9
COL6A3-204ENST00000392003 A0A087WXM4 84 aa9.43□□□□□ -0.9
COL6A3-204ENST00000392003 STK16O75716 305 aa9.43□□□□□ -0.9
COL6A3-204ENST00000392003 CBSLP0DN79 551 aa9.43□□□□□ -0.9
COL6A3-204ENST00000392003 CBSP35520 551 aa9.43□□□□□ -0.9
COL6A3-204ENST00000392003 GDF5P43026 501 aa9.43□□□□□ -0.9
COL6A3-204ENST00000392003 DGKQP52824 942 aa9.43□□□□□ -0.9
COL6A3-204ENST00000392003 DSTNP60981 165 aa9.43□□□□□ -0.9
COL6A3-204ENST00000392003 B2MP61769 119 aa9.43□□□□□ -0.9
COL6A3-204ENST00000392003 KCNJ8Q15842 424 aa9.43□□□□□ -0.9
COL6A3-204ENST00000392003 FAM98BQ52LJ0 330 aaKnown RBP9.43□□□□□ -0.9
COL6A3-204ENST00000392003 ARHGAP15Q53QZ3 475 aa9.43□□□□□ -0.9
COL6A3-204ENST00000392003 NHSL2Q5HYW2 709 aa9.43□□□□□ -0.9
COL6A3-204ENST00000392003 MPP7Q5T2T1 576 aa9.43□□□□□ -0.9
COL6A3-204ENST00000392003 METTL2BQ6P1Q9 378 aaKnown RBP9.43□□□□□ -0.9
COL6A3-204ENST00000392003 HTR3DQ70Z44 454 aa9.43□□□□□ -0.9
COL6A3-204ENST00000392003 FIBINQ8TAL6 211 aa9.43□□□□□ -0.9
COL6A3-204ENST00000392003 ITFG1Q8TB96 612 aa9.43□□□□□ -0.9
COL6A3-204ENST00000392003 LKAAEAR1Q8TD35 194 aa9.43□□□□□ -0.9
COL6A3-204ENST00000392003 TFAP2CQ92754 450 aa9.43□□□□□ -0.9
COL6A3-204ENST00000392003 RPL10LQ96L21 214 aaKnown RBP9.43□□□□□ -0.9
COL6A3-204ENST00000392003 IL21Q9HBE4 155 aa9.43□□□□□ -0.9
COL6A3-204ENST00000392003 LRTM1Q9HBL6 345 aa9.43□□□□□ -0.9
COL6A3-204ENST00000392003 ARL15Q9NXU5 204 aa9.43□□□□□ -0.9
COL6A3-204ENST00000392003 ZDHHC3Q9NYG2 299 aa9.43□□□□□ -0.9
COL6A3-204ENST00000392003 SLAMF8Q9P0V8 285 aa9.43□□□□□ -0.9
COL6A3-204ENST00000392003 AP3M1Q9Y2T2 418 aa9.43□□□□□ -0.9
COL6A3-204ENST00000392003 PCDHB3Q9Y5E6 796 aa9.43□□□□□ -0.9
COL6A3-204ENST00000392003 PCDHGA11Q9Y5H2 935 aa9.43□□□□□ -0.9
COL6A3-204ENST00000392003 TRBV5-4A0A0C4DH59 114 aa9.42□□□□□ -0.9
COL6A3-204ENST00000392003 RASAL1O95294 804 aa9.42□□□□□ -0.9
COL6A3-204ENST00000392003 EBLN1P0CF75 366 aa9.42□□□□□ -0.9
COL6A3-204ENST00000392003 JAK1P23458 1154 aa9.42□□□□□ -0.9
COL6A3-204ENST00000392003 EVI2BP34910 448 aa9.42□□□□□ -0.9
COL6A3-204ENST00000392003 OR4D2P58180 307 aa9.42□□□□□ -0.9
COL6A3-204ENST00000392003 TUBA4AP68366 448 aa9.42□□□□□ -0.9
COL6A3-204ENST00000392003 ATP6AP1Q15904 470 aa9.42□□□□□ -0.9
COL6A3-204ENST00000392003 PHKG1Q16816 387 aa9.42□□□□□ -0.9
COL6A3-204ENST00000392003 SMU1Q2TAY7 513 aa9.42□□□□□ -0.9
COL6A3-204ENST00000392003 RFTN2Q52LD8 501 aaPredicted RBP9.42□□□□□ -0.9
COL6A3-204ENST00000392003 GPRC6AQ5T6X5 926 aa9.42□□□□□ -0.9
COL6A3-204ENST00000392003 FAM9CQ8IZT9 166 aa9.42□□□□□ -0.9
COL6A3-204ENST00000392003 METTL25Q8N6Q8 603 aa9.42□□□□□ -0.9
COL6A3-204ENST00000392003 GLB1L3Q8NCI6 653 aaPredicted RBP9.42□□□□□ -0.9
COL6A3-204ENST00000392003 FAM110BQ8TC76 370 aa9.42□□□□□ -0.9
COL6A3-204ENST00000392003 GRIN3AQ8TCU5 1115 aa9.42□□□□□ -0.9
COL6A3-204ENST00000392003 ADAMTS19Q8TE59 1207 aa9.42□□□□□ -0.9
COL6A3-204ENST00000392003 SLC13A3Q8WWT9 602 aa9.42□□□□□ -0.9
COL6A3-204ENST00000392003 CHID1Q9BWS9 393 aa9.42□□□□□ -0.9
COL6A3-204ENST00000392003 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.42□□□□□ -0.9
COL6A3-204ENST00000392003 SUV39H2Q9H5I1 410 aa9.42□□□□□ -0.9
COL6A3-204ENST00000392003 CD320Q9NPF0 282 aa9.42□□□□□ -0.9
COL6A3-204ENST00000392003 HPS4Q9NQG7 708 aa9.42□□□□□ -0.9
COL6A3-204ENST00000392003 TRPS1Q9UHF7 1281 aa9.42□□□□□ -0.9
COL6A3-204ENST00000392003 SCN5AQ14524 2016 aa9.42□□□□□ -0.9
COL6A3-204ENST00000392003 TAPBPO15533 448 aa9.42□□□□□ -0.9
COL6A3-204ENST00000392003 TULP3O75386 442 aa9.42□□□□□ -0.9
COL6A3-204ENST00000392003 OLFM2O95897 454 aa9.42□□□□□ -0.9
COL6A3-204ENST00000392003 CCDC159P0C7I6 412 aa9.42□□□□□ -0.9
COL6A3-204ENST00000392003 CDH1P12830 882 aa9.42□□□□□ -0.9
COL6A3-204ENST00000392003 RECQLP46063 649 aaPredicted RBP9.42□□□□□ -0.9
COL6A3-204ENST00000392003 MTPNP58546 118 aa9.42□□□□□ -0.9
COL6A3-204ENST00000392003 DGLUCYQ7Z3D6 616 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms