RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 SCO1O75880 301 aa14.34□□□□□ -0.11
VPS9D1-201ENST00000389386 CD1DP15813 335 aa14.34□□□□□ -0.11
VPS9D1-201ENST00000389386 EPHA2P29317 976 aa14.34□□□□□ -0.11
VPS9D1-201ENST00000389386 TNFSF8P32971 234 aa14.34□□□□□ -0.11
VPS9D1-201ENST00000389386 TIE1P35590 1138 aa14.34□□□□□ -0.11
VPS9D1-201ENST00000389386 CHRNA4P43681 627 aa14.34□□□□□ -0.11
VPS9D1-201ENST00000389386 SLC9A3P48764 834 aa14.34□□□□□ -0.11
VPS9D1-201ENST00000389386 CAP1Q01518 475 aa14.34□□□□□ -0.11
VPS9D1-201ENST00000389386 IL1RL1Q01638 556 aa14.34□□□□□ -0.11
VPS9D1-201ENST00000389386 LCP2Q13094 533 aa14.34□□□□□ -0.11
VPS9D1-201ENST00000389386 MAP2K5Q13163 448 aa14.34□□□□□ -0.11
VPS9D1-201ENST00000389386 PON2Q15165 354 aa14.34□□□□□ -0.11
VPS9D1-201ENST00000389386 OR4D1Q15615 310 aa14.34□□□□□ -0.11
VPS9D1-201ENST00000389386 PLA2G4EQ3MJ16 856 aa14.34□□□□□ -0.11
VPS9D1-201ENST00000389386 SCIMPQ6UWF3 145 aa14.34□□□□□ -0.11
VPS9D1-201ENST00000389386 KCTD20Q7Z5Y7 419 aa14.34□□□□□ -0.11
VPS9D1-201ENST00000389386 SYVN1Q86TM6 617 aa14.34□□□□□ -0.11
VPS9D1-201ENST00000389386 CCDC71Q8IV32 467 aaPredicted RBP14.34□□□□□ -0.11
VPS9D1-201ENST00000389386 CYP4Z2PQ8N1L4 340 aa14.34□□□□□ -0.11
VPS9D1-201ENST00000389386 PAF1Q8N7H5 531 aa14.34□□□□□ -0.11
VPS9D1-201ENST00000389386 ST13P5Q8NFI4 369 aaPredicted RBP14.34□□□□□ -0.11
VPS9D1-201ENST00000389386 OR52E4Q8NGH9 312 aa14.34□□□□□ -0.11
VPS9D1-201ENST00000389386 OR2T11Q8NH01 316 aa14.34□□□□□ -0.11
VPS9D1-201ENST00000389386 NUDT8Q8WV74 236 aa14.34□□□□□ -0.11
VPS9D1-201ENST00000389386 FAM162AQ96A26 154 aa14.34□□□□□ -0.11
VPS9D1-201ENST00000389386 C8orf48Q96LL4 319 aa14.34□□□□□ -0.11
VPS9D1-201ENST00000389386 ZNF599Q96NL3 588 aa14.34□□□□□ -0.11
VPS9D1-201ENST00000389386 UCK2Q9BZX2 261 aa14.34□□□□□ -0.11
VPS9D1-201ENST00000389386 KLHL20Q9Y2M5 609 aa14.34□□□□□ -0.11
VPS9D1-201ENST00000389386 HCN4Q9Y3Q4 1203 aa14.34□□□□□ -0.11
VPS9D1-201ENST00000389386 A0A096LPI6 279 aa14.33□□□□□ -0.12
VPS9D1-201ENST00000389386 TREHO43280 583 aa14.33□□□□□ -0.12
VPS9D1-201ENST00000389386 DFNA5O60443 496 aa14.33□□□□□ -0.12
VPS9D1-201ENST00000389386 RECQL4O94761 1208 aa14.33□□□□□ -0.12
VPS9D1-201ENST00000389386 CYP2A6P11509 494 aaPredicted RBP14.33□□□□□ -0.12
VPS9D1-201ENST00000389386 C21orf33P30042 268 aaPredicted RBP14.33□□□□□ -0.12
VPS9D1-201ENST00000389386 MLLT3P42568 568 aaPredicted RBP14.33□□□□□ -0.12
VPS9D1-201ENST00000389386 GZMKP49863 264 aa14.33□□□□□ -0.12
VPS9D1-201ENST00000389386 PLIN5Q00G26 463 aa14.33□□□□□ -0.12
VPS9D1-201ENST00000389386 SREBF2Q12772 1141 aa14.33□□□□□ -0.12
VPS9D1-201ENST00000389386 LAPTM4AQ15012 233 aa14.33□□□□□ -0.12
VPS9D1-201ENST00000389386 MORN1Q5T089 497 aa14.33□□□□□ -0.12
VPS9D1-201ENST00000389386 CPZQ66K79 652 aa14.33□□□□□ -0.12
VPS9D1-201ENST00000389386 TCTE3Q8IZS6 198 aa14.33□□□□□ -0.12
VPS9D1-201ENST00000389386 RYBPQ8N488 228 aaPredicted RBP14.33□□□□□ -0.12
VPS9D1-201ENST00000389386 OR10A6Q8NH74 314 aa14.33□□□□□ -0.12
VPS9D1-201ENST00000389386 CCDC120Q96HB5 630 aa14.33□□□□□ -0.12
VPS9D1-201ENST00000389386 ACAT2Q9BWD1 397 aa14.33□□□□□ -0.12
VPS9D1-201ENST00000389386 PRRG3Q9BZD7 231 aa14.33□□□□□ -0.12
VPS9D1-201ENST00000389386 GABARAPL1Q9H0R8 117 aa14.33□□□□□ -0.12
VPS9D1-201ENST00000389386 MAGIXQ9H6Y5 334 aa14.33□□□□□ -0.12
VPS9D1-201ENST00000389386 ZNF556Q9HAH1 456 aa14.33□□□□□ -0.12
VPS9D1-201ENST00000389386 DCAF13Q9NV06 445 aaKnown RBP14.33□□□□□ -0.12
VPS9D1-201ENST00000389386 TEKT2Q9UIF3 430 aa14.33□□□□□ -0.12
VPS9D1-201ENST00000389386 PIN4Q9Y237 131 aaKnown RBP14.33□□□□□ -0.12
VPS9D1-201ENST00000389386 CXCR6O00574 342 aa14.33□□□□□ -0.12
VPS9D1-201ENST00000389386 AKR7A2O43488 359 aa14.33□□□□□ -0.12
VPS9D1-201ENST00000389386 ARHGEF15O94989 841 aa14.33□□□□□ -0.12
VPS9D1-201ENST00000389386 SCELO95171 688 aa14.33□□□□□ -0.12
VPS9D1-201ENST00000389386 PSKH1P11801 424 aa14.33□□□□□ -0.12
VPS9D1-201ENST00000389386 LMO2P25791 158 aa14.33□□□□□ -0.12
VPS9D1-201ENST00000389386 ADRA1AP35348 466 aa14.33□□□□□ -0.12
VPS9D1-201ENST00000389386 HCAR3P49019 387 aa14.33□□□□□ -0.12
VPS9D1-201ENST00000389386 TNK1Q13470 666 aa14.33□□□□□ -0.12
VPS9D1-201ENST00000389386 TBCEQ15813 527 aaPredicted RBP14.33□□□□□ -0.12
VPS9D1-201ENST00000389386 PROX2Q3B8N5 592 aa14.33□□□□□ -0.12
VPS9D1-201ENST00000389386 PIK3R6Q5UE93 754 aa14.33□□□□□ -0.12
VPS9D1-201ENST00000389386 KDM4DQ6B0I6 523 aa14.33□□□□□ -0.12
VPS9D1-201ENST00000389386 AMIGO1Q86WK6 493 aa14.33□□□□□ -0.12
VPS9D1-201ENST00000389386 DTX3Q8N9I9 347 aa14.33□□□□□ -0.12
VPS9D1-201ENST00000389386 TTC29Q8NA56 475 aaPredicted RBP14.33□□□□□ -0.12
VPS9D1-201ENST00000389386 DNASE1L2Q92874 299 aa14.33□□□□□ -0.12
VPS9D1-201ENST00000389386 EMID1Q96A84 441 aaPredicted RBP14.33□□□□□ -0.12
VPS9D1-201ENST00000389386 CEP19Q96LK0 163 aa14.33□□□□□ -0.12
VPS9D1-201ENST00000389386 KCNS3Q9BQ31 491 aa14.33□□□□□ -0.12
VPS9D1-201ENST00000389386 VAPAQ9P0L0 249 aa14.33□□□□□ -0.12
VPS9D1-201ENST00000389386 EIF3KQ9UBQ5 218 aaKnown RBP14.33□□□□□ -0.12
VPS9D1-201ENST00000389386 TLL1O43897 1013 aa14.32□□□□□ -0.12
VPS9D1-201ENST00000389386 GPR32O75388 356 aa14.32□□□□□ -0.12
VPS9D1-201ENST00000389386 PAPSS2O95340 614 aaPredicted RBP14.32□□□□□ -0.12
VPS9D1-201ENST00000389386 IL32P24001 234 aa14.32□□□□□ -0.12
VPS9D1-201ENST00000389386 SOX6P35712 828 aa14.32□□□□□ -0.12
VPS9D1-201ENST00000389386 DGKQP52824 942 aa14.32□□□□□ -0.12
VPS9D1-201ENST00000389386 HABP4Q5JVS0 413 aaKnown RBP14.32□□□□□ -0.12
VPS9D1-201ENST00000389386 C6orf136Q5SQH8 315 aa14.32□□□□□ -0.12
VPS9D1-201ENST00000389386 FAM122CQ6P4D5 195 aa14.32□□□□□ -0.12
VPS9D1-201ENST00000389386 CREB3L2Q70SY1 520 aa14.32□□□□□ -0.12
VPS9D1-201ENST00000389386 CEP68Q76N32 757 aa14.32□□□□□ -0.12
VPS9D1-201ENST00000389386 FAM126BQ8IXS8 530 aa14.32□□□□□ -0.12
VPS9D1-201ENST00000389386 OR10T2Q8NGX3 314 aa14.32□□□□□ -0.12
VPS9D1-201ENST00000389386 SLC2A14Q8TDB8 520 aa14.32□□□□□ -0.12
VPS9D1-201ENST00000389386 APH1BQ8WW43 257 aa14.32□□□□□ -0.12
VPS9D1-201ENST00000389386 PABPC5Q96DU9 382 aaKnown RBP14.32□□□□□ -0.12
VPS9D1-201ENST00000389386 MCCC1Q96RQ3 725 aaPredicted RBP14.32□□□□□ -0.12
VPS9D1-201ENST00000389386 CHCHD6Q9BRQ6 235 aa14.32□□□□□ -0.12
VPS9D1-201ENST00000389386 COPS4Q9BT78 406 aa14.32□□□□□ -0.12
VPS9D1-201ENST00000389386 SEMA4BQ9NPR2 832 aaPredicted RBP14.32□□□□□ -0.12
VPS9D1-201ENST00000389386 ENPP3O14638 875 aa14.32□□□□□ -0.12
VPS9D1-201ENST00000389386 PCDHGA12O60330 932 aa14.32□□□□□ -0.12
VPS9D1-201ENST00000389386 ANXA9O76027 345 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms