RNA–Protein interactions for RNA: ENST00000381209.7

RPAIN-203, Transcript of RPA interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPAIN, Length 1,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-203ENST00000381209 ACPPP15309 386 aa16.79■□□□□ 0.28
RPAIN-203ENST00000381209 SLC6A2P23975 617 aa16.79■□□□□ 0.28
RPAIN-203ENST00000381209 IMPA1P29218 277 aa16.79■□□□□ 0.28
RPAIN-203ENST00000381209 HALP42357 657 aa16.79■□□□□ 0.28
RPAIN-203ENST00000381209 CDK3Q00526 305 aa16.79■□□□□ 0.28
RPAIN-203ENST00000381209 NAE1Q13564 534 aa16.79■□□□□ 0.28
RPAIN-203ENST00000381209 COL19A1Q14993 1142 aa16.79■□□□□ 0.28
RPAIN-203ENST00000381209 TAF11Q15544 211 aa16.79■□□□□ 0.28
RPAIN-203ENST00000381209 PRAMEF9Q5VWM5 478 aa16.79■□□□□ 0.28
RPAIN-203ENST00000381209 FRG2Q64ET8 278 aa16.79■□□□□ 0.28
RPAIN-203ENST00000381209 EP400NLQ6ZTU2 488 aa16.79■□□□□ 0.28
RPAIN-203ENST00000381209 C11orf96Q7Z7L8 435 aa16.79■□□□□ 0.28
RPAIN-203ENST00000381209 SLC15A3Q8IY34 581 aa16.79■□□□□ 0.28
RPAIN-203ENST00000381209 FAM9CQ8IZT9 166 aa16.79■□□□□ 0.28
RPAIN-203ENST00000381209 VPS33AQ96AX1 596 aa16.79■□□□□ 0.28
RPAIN-203ENST00000381209 ERLEC1Q96DZ1 483 aa16.79■□□□□ 0.28
RPAIN-203ENST00000381209 CMTM7Q96FZ5 175 aa16.79■□□□□ 0.28
RPAIN-203ENST00000381209 FRG2BQ96QU4 278 aa16.79■□□□□ 0.28
RPAIN-203ENST00000381209 INTS7Q9NVH2 962 aaKnown RBP16.79■□□□□ 0.28
RPAIN-203ENST00000381209 C6orf203Q9P0P8 240 aaPredicted RBP16.79■□□□□ 0.28
RPAIN-203ENST00000381209 TMED5Q9Y3A6 229 aa16.79■□□□□ 0.28
RPAIN-203ENST00000381209 LAMA2P24043 3122 aaKnown RBP16.79■□□□□ 0.28
RPAIN-203ENST00000381209 C15orf38-AP3S2A0A0A6YYH1 394 aa16.78■□□□□ 0.28
RPAIN-203ENST00000381209 A0A1W2PP55 124 aa16.78■□□□□ 0.28
RPAIN-203ENST00000381209 KLHL33A6NCF5 533 aa16.78■□□□□ 0.28
RPAIN-203ENST00000381209 GPR89AB7ZAQ6 455 aa16.78■□□□□ 0.28
RPAIN-203ENST00000381209 CLGNO14967 610 aa16.78■□□□□ 0.28
RPAIN-203ENST00000381209 PCCBP05166 539 aa16.78■□□□□ 0.28
RPAIN-203ENST00000381209 C8BP07358 591 aa16.78■□□□□ 0.28
RPAIN-203ENST00000381209 GPR89BP0CG08 455 aa16.78■□□□□ 0.28
RPAIN-203ENST00000381209 HSD17B1P14061 328 aa16.78■□□□□ 0.28
RPAIN-203ENST00000381209 ACADSP16219 412 aa16.78■□□□□ 0.28
RPAIN-203ENST00000381209 TCN1P20061 433 aaPredicted RBP16.78■□□□□ 0.28
RPAIN-203ENST00000381209 VARSP26640 1264 aaKnown RBP16.78■□□□□ 0.28
RPAIN-203ENST00000381209 ACADLP28330 430 aa16.78■□□□□ 0.28
RPAIN-203ENST00000381209 MSX2P35548 267 aaPredicted RBP16.78■□□□□ 0.28
RPAIN-203ENST00000381209 HNF4AP41235 474 aa16.78■□□□□ 0.28
RPAIN-203ENST00000381209 CASP2P42575 452 aa16.78■□□□□ 0.28
RPAIN-203ENST00000381209 SEC13P55735 322 aa16.78■□□□□ 0.28
RPAIN-203ENST00000381209 STARD3Q14849 445 aa16.78■□□□□ 0.28
RPAIN-203ENST00000381209 KIAA0040Q15053 153 aa16.78■□□□□ 0.28
RPAIN-203ENST00000381209 CCSMST1Q4G0I0 132 aa16.78■□□□□ 0.28
RPAIN-203ENST00000381209 TIGD2Q4W5G0 525 aa16.78■□□□□ 0.28
RPAIN-203ENST00000381209 PAGE3Q5JUK9 113 aa16.78■□□□□ 0.28
RPAIN-203ENST00000381209 TLDC1Q6P9B6 456 aa16.78■□□□□ 0.28
RPAIN-203ENST00000381209 UNC5DQ6UXZ4 953 aa16.78■□□□□ 0.28
RPAIN-203ENST00000381209 RNF111Q6ZNA4 994 aa16.78■□□□□ 0.28
RPAIN-203ENST00000381209 ARPINQ7Z6K5 226 aa16.78■□□□□ 0.28
RPAIN-203ENST00000381209 HEATR4Q86WZ0 1026 aa16.78■□□□□ 0.28
RPAIN-203ENST00000381209 SMRP1Q8NCR6 262 aa16.78■□□□□ 0.28
RPAIN-203ENST00000381209 LRCH3Q96II8 777 aa16.78■□□□□ 0.28
RPAIN-203ENST00000381209 SLC39A3Q9BRY0 314 aa16.78■□□□□ 0.28
RPAIN-203ENST00000381209 TEX101Q9BY14 249 aa16.78■□□□□ 0.28
RPAIN-203ENST00000381209 VCX3BQ9H321 246 aa16.78■□□□□ 0.28
RPAIN-203ENST00000381209 IL1RL2Q9HB29 575 aa16.78■□□□□ 0.28
RPAIN-203ENST00000381209 TRPV5Q9NQA5 729 aa16.78■□□□□ 0.28
RPAIN-203ENST00000381209 PCDHA9Q9Y5H5 950 aa16.78■□□□□ 0.28
RPAIN-203ENST00000381209 KRT87PA6NCN2 255 aa16.77■□□□□ 0.28
RPAIN-203ENST00000381209 CCDC85CA6NKD9 419 aa16.77■□□□□ 0.28
RPAIN-203ENST00000381209 NME4O00746 187 aa16.77■□□□□ 0.28
RPAIN-203ENST00000381209 CASQ2O14958 399 aaPredicted RBP16.77■□□□□ 0.28
RPAIN-203ENST00000381209 STAMBPO95630 424 aa16.77■□□□□ 0.28
RPAIN-203ENST00000381209 SLC16A8O95907 504 aa16.77■□□□□ 0.28
RPAIN-203ENST00000381209 PRPS2P11908 318 aa16.77■□□□□ 0.28
RPAIN-203ENST00000381209 MAPK1P28482 360 aa16.77■□□□□ 0.28
RPAIN-203ENST00000381209 CTHP32929 405 aa16.77■□□□□ 0.28
RPAIN-203ENST00000381209 BNIP2Q12982 314 aa16.77■□□□□ 0.28
RPAIN-203ENST00000381209 CSTF3Q12996 717 aaKnown RBP16.77■□□□□ 0.28
RPAIN-203ENST00000381209 E2F2Q14209 437 aa16.77■□□□□ 0.28
RPAIN-203ENST00000381209 USP39Q53GS9 565 aaKnown RBP16.77■□□□□ 0.28
RPAIN-203ENST00000381209 GRHL2Q6ISB3 625 aa16.77■□□□□ 0.28
RPAIN-203ENST00000381209 CRTC3Q6UUV7 619 aa16.77■□□□□ 0.28
RPAIN-203ENST00000381209 TRMT11Q7Z4G4 463 aaKnown RBP16.77■□□□□ 0.28
RPAIN-203ENST00000381209 LRRTM4Q86VH4 590 aa16.77■□□□□ 0.28
RPAIN-203ENST00000381209 TMEM126BQ8IUX1 230 aa16.77■□□□□ 0.28
RPAIN-203ENST00000381209 OXR1Q8N573 874 aa16.77■□□□□ 0.28
RPAIN-203ENST00000381209 FAM156AQ8NDB6 213 aa16.77■□□□□ 0.28
RPAIN-203ENST00000381209 OR9A1PQ8NGU1 263 aa16.77■□□□□ 0.28
RPAIN-203ENST00000381209 FOXJ1Q92949 421 aa16.77■□□□□ 0.28
RPAIN-203ENST00000381209 MTFMTQ96DP5 389 aaKnown RBP16.77■□□□□ 0.28
RPAIN-203ENST00000381209 DUS3LQ96G46 650 aaKnown RBP16.77■□□□□ 0.28
RPAIN-203ENST00000381209 NAF1Q96HR8 494 aaKnown RBP16.77■□□□□ 0.28
RPAIN-203ENST00000381209 RSRC1Q96IZ7 334 aaKnown RBP16.77■□□□□ 0.28
RPAIN-203ENST00000381209 SLC45A3Q96JT2 553 aa16.77■□□□□ 0.28
RPAIN-203ENST00000381209 DPY30Q9C005 99 aa16.77■□□□□ 0.28
RPAIN-203ENST00000381209 ITM2CQ9NQX7 267 aa16.77■□□□□ 0.28
RPAIN-203ENST00000381209 CMTM6Q9NX76 183 aa16.77■□□□□ 0.28
RPAIN-203ENST00000381209 SERGEFQ9UGK8 458 aa16.77■□□□□ 0.28
RPAIN-203ENST00000381209 TMEM98Q9Y2Y6 226 aa16.77■□□□□ 0.28
RPAIN-203ENST00000381209 H0YIV9 168 aa16.76■□□□□ 0.27
RPAIN-203ENST00000381209 RNASEH2AO75792 299 aaKnown RBP16.76■□□□□ 0.27
RPAIN-203ENST00000381209 ATP6V1C1P21283 382 aa16.76■□□□□ 0.27
RPAIN-203ENST00000381209 TRIM23P36406 574 aa16.76■□□□□ 0.27
RPAIN-203ENST00000381209 PNLIPRP1P54315 467 aa16.76■□□□□ 0.27
RPAIN-203ENST00000381209 RPS21P63220 83 aaKnown RBP16.76■□□□□ 0.27
RPAIN-203ENST00000381209 MRPS22P82650 360 aaKnown RBP16.76■□□□□ 0.27
RPAIN-203ENST00000381209 XKR6Q5GH73 641 aa16.76■□□□□ 0.27
RPAIN-203ENST00000381209 TMEM196Q5HYL7 178 aa16.76■□□□□ 0.27
RPAIN-203ENST00000381209 C6orf10Q5SRN2 563 aa16.76■□□□□ 0.27
RPAIN-203ENST00000381209 CAPN13Q6MZZ7 669 aaPredicted RBP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms