RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 RPP40O75818 363 aaKnown RBP7.55□□□□□ -1.2
CDKL5-202ENST00000379996 H6PDO95479 791 aa7.55□□□□□ -1.2
CDKL5-202ENST00000379996 PRSS56P0CW18 603 aa7.55□□□□□ -1.2
CDKL5-202ENST00000379996 ADRB3P13945 408 aa7.55□□□□□ -1.2
CDKL5-202ENST00000379996 HOXB2P14652 356 aa7.55□□□□□ -1.2
CDKL5-202ENST00000379996 ATF4P18848 351 aaPredicted RBP7.55□□□□□ -1.2
CDKL5-202ENST00000379996 LPOP22079 712 aaPredicted RBP7.55□□□□□ -1.2
CDKL5-202ENST00000379996 NUDT1P36639 197 aa7.55□□□□□ -1.2
CDKL5-202ENST00000379996 HK3P52790 923 aa7.55□□□□□ -1.2
CDKL5-202ENST00000379996 ADARP55265 1226 aaKnown RBP7.55□□□□□ -1.2
CDKL5-202ENST00000379996 DPTQ07507 201 aa7.55□□□□□ -1.2
CDKL5-202ENST00000379996 KIAA0040Q15053 153 aa7.55□□□□□ -1.2
CDKL5-202ENST00000379996 PCSK7Q16549 785 aa7.55□□□□□ -1.2
CDKL5-202ENST00000379996 PYCR3Q53H96 274 aa7.55□□□□□ -1.2
CDKL5-202ENST00000379996 ERAP2Q6P179 960 aa7.55□□□□□ -1.2
CDKL5-202ENST00000379996 B3GNT6Q6ZMB0 384 aa7.55□□□□□ -1.2
CDKL5-202ENST00000379996 BMP8AQ7Z5Y6 402 aa7.55□□□□□ -1.2
CDKL5-202ENST00000379996 AMIGO2Q86SJ2 522 aa7.55□□□□□ -1.2
CDKL5-202ENST00000379996 CHPFQ8IZ52 775 aa7.55□□□□□ -1.2
CDKL5-202ENST00000379996 CLYBLQ8N0X4 340 aa7.55□□□□□ -1.2
CDKL5-202ENST00000379996 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.55□□□□□ -1.2
CDKL5-202ENST00000379996 LPCAT1Q8NF37 534 aa7.55□□□□□ -1.2
CDKL5-202ENST00000379996 TWIST2Q8WVJ9 160 aa7.55□□□□□ -1.2
CDKL5-202ENST00000379996 SLC45A3Q96JT2 553 aa7.55□□□□□ -1.2
CDKL5-202ENST00000379996 DNAJC1Q96KC8 554 aaKnown RBP7.55□□□□□ -1.2
CDKL5-202ENST00000379996 COQ10AQ96MF6 247 aa7.55□□□□□ -1.2
CDKL5-202ENST00000379996 TSNARE1Q96NA8 513 aa7.55□□□□□ -1.2
CDKL5-202ENST00000379996 KCNA7Q96RP8 456 aa7.55□□□□□ -1.2
CDKL5-202ENST00000379996 SLC30A3Q99726 388 aa7.55□□□□□ -1.2
CDKL5-202ENST00000379996 GRIP2Q9C0E4 1043 aa7.55□□□□□ -1.2
CDKL5-202ENST00000379996 C12orf49Q9H741 205 aa7.55□□□□□ -1.2
CDKL5-202ENST00000379996 PRMT8Q9NR22 394 aaPredicted RBP7.55□□□□□ -1.2
CDKL5-202ENST00000379996 INTS10Q9NVR2 710 aaKnown RBP7.55□□□□□ -1.2
CDKL5-202ENST00000379996 TMEM45AQ9NWC5 275 aa7.55□□□□□ -1.2
CDKL5-202ENST00000379996 GALPQ9UBC7 116 aa7.55□□□□□ -1.2
CDKL5-202ENST00000379996 GIMAP2Q9UG22 337 aa7.55□□□□□ -1.2
CDKL5-202ENST00000379996 PFDN2Q9UHV9 154 aa7.55□□□□□ -1.2
CDKL5-202ENST00000379996 APPL1Q9UKG1 709 aa7.55□□□□□ -1.2
CDKL5-202ENST00000379996 ASB1Q9Y576 335 aa7.55□□□□□ -1.2
CDKL5-202ENST00000379996 XIRP2A4UGR9 3374 aa7.55□□□□□ -1.2
CDKL5-202ENST00000379996 UBXN8O00124 270 aa7.55□□□□□ -1.2
CDKL5-202ENST00000379996 UPK1AO00322 258 aa7.55□□□□□ -1.2
CDKL5-202ENST00000379996 ANKRD28O15084 1053 aa7.55□□□□□ -1.2
CDKL5-202ENST00000379996 EEDO75530 441 aaKnown RBP7.55□□□□□ -1.2
CDKL5-202ENST00000379996 SIX3O95343 332 aaPredicted RBP7.55□□□□□ -1.2
CDKL5-202ENST00000379996 PYGLP06737 847 aa7.55□□□□□ -1.2
CDKL5-202ENST00000379996 CDK4P11802 303 aa7.55□□□□□ -1.2
CDKL5-202ENST00000379996 HRH2P25021 359 aa7.55□□□□□ -1.2
CDKL5-202ENST00000379996 SLC7A2P52569 658 aa7.55□□□□□ -1.2
CDKL5-202ENST00000379996 NR1H2P55055 460 aa7.55□□□□□ -1.2
CDKL5-202ENST00000379996 GRIK2Q13002 908 aa7.55□□□□□ -1.2
CDKL5-202ENST00000379996 GALNT3Q14435 633 aa7.55□□□□□ -1.2
CDKL5-202ENST00000379996 RBBP5Q15291 538 aaKnown RBP7.55□□□□□ -1.2
CDKL5-202ENST00000379996 KCTD21Q4G0X4 260 aa7.55□□□□□ -1.2
CDKL5-202ENST00000379996 CTSL3PQ5NE16 218 aa7.55□□□□□ -1.2
CDKL5-202ENST00000379996 LYPLAL1Q5VWZ2 237 aa7.55□□□□□ -1.2
CDKL5-202ENST00000379996 KIAA1161Q6NSJ0 714 aa7.55□□□□□ -1.2
CDKL5-202ENST00000379996 CRTC1Q6UUV9 634 aa7.55□□□□□ -1.2
CDKL5-202ENST00000379996 PTAR1Q7Z6K3 402 aaPredicted RBP7.55□□□□□ -1.2
CDKL5-202ENST00000379996 TECPR1Q7Z6L1 1165 aa7.55□□□□□ -1.2
CDKL5-202ENST00000379996 RIMKLAQ8IXN7 391 aa7.55□□□□□ -1.2
CDKL5-202ENST00000379996 RPLP0P6Q8NHW5 317 aa7.55□□□□□ -1.2
CDKL5-202ENST00000379996 GABPB2Q8TAK5 448 aaPredicted RBP7.55□□□□□ -1.2
CDKL5-202ENST00000379996 HPS1Q92902 700 aa7.55□□□□□ -1.2
CDKL5-202ENST00000379996 FUBP1Q96AE4 644 aaKnown RBP7.55□□□□□ -1.2
CDKL5-202ENST00000379996 PHF21BQ96EK2 531 aa7.55□□□□□ -1.2
CDKL5-202ENST00000379996 TBATAQ96M53 351 aa7.55□□□□□ -1.2
CDKL5-202ENST00000379996 VPS35Q96QK1 796 aa7.55□□□□□ -1.2
CDKL5-202ENST00000379996 Q9H521 79 aa7.55□□□□□ -1.2
CDKL5-202ENST00000379996 ACTL8Q9H568 366 aa7.55□□□□□ -1.2
CDKL5-202ENST00000379996 TBC1D17Q9HA65 648 aa7.55□□□□□ -1.2
CDKL5-202ENST00000379996 AIG1Q9NVV5 245 aa7.55□□□□□ -1.2
CDKL5-202ENST00000379996 CROTQ9UKG9 612 aa7.55□□□□□ -1.2
CDKL5-202ENST00000379996 CCL27Q9Y4X3 112 aa7.55□□□□□ -1.2
CDKL5-202ENST00000379996 FADS3Q9Y5Q0 445 aa7.55□□□□□ -1.2
CDKL5-202ENST00000379996 TNRC6BQ9UPQ9 1833 aaKnown RBP7.54□□□□□ -1.2
CDKL5-202ENST00000379996 TOR1BO14657 336 aa7.54□□□□□ -1.2
CDKL5-202ENST00000379996 CD3EAPO15446 510 aaKnown RBP7.54□□□□□ -1.2
CDKL5-202ENST00000379996 CFLARO15519 480 aa7.54□□□□□ -1.2
CDKL5-202ENST00000379996 UGT2B4P06133 528 aa7.54□□□□□ -1.2
CDKL5-202ENST00000379996 IL12AP29459 219 aa7.54□□□□□ -1.2
CDKL5-202ENST00000379996 P2RY2P41231 377 aa7.54□□□□□ -1.2
CDKL5-202ENST00000379996 PTSQ03393 145 aa7.54□□□□□ -1.2
CDKL5-202ENST00000379996 NXNQ6DKJ4 435 aa7.54□□□□□ -1.2
CDKL5-202ENST00000379996 RNF165Q6ZSG1 346 aa7.54□□□□□ -1.2
CDKL5-202ENST00000379996 GLT6D1Q7Z4J2 308 aa7.54□□□□□ -1.2
CDKL5-202ENST00000379996 TRIM69Q86WT6 500 aa7.54□□□□□ -1.2
CDKL5-202ENST00000379996 KIAA2013Q8IYS2 634 aa7.54□□□□□ -1.2
CDKL5-202ENST00000379996 AADATQ8N5Z0 425 aa7.54□□□□□ -1.2
CDKL5-202ENST00000379996 OR13C4Q8NGS5 318 aa7.54□□□□□ -1.2
CDKL5-202ENST00000379996 HM13Q8TCT9 377 aa7.54□□□□□ -1.2
CDKL5-202ENST00000379996 CANT1Q8WVQ1 401 aa7.54□□□□□ -1.2
CDKL5-202ENST00000379996 GAB3Q8WWW8 586 aa7.54□□□□□ -1.2
CDKL5-202ENST00000379996 TMIGD2Q96BF3 282 aa7.54□□□□□ -1.2
CDKL5-202ENST00000379996 PRPF18Q99633 342 aaKnown RBP7.54□□□□□ -1.2
CDKL5-202ENST00000379996 HOPXQ9BPY8 73 aaPredicted RBP7.54□□□□□ -1.2
CDKL5-202ENST00000379996 SGK2Q9HBY8 427 aa7.54□□□□□ -1.2
CDKL5-202ENST00000379996 ITM2CQ9NQX7 267 aa7.54□□□□□ -1.2
CDKL5-202ENST00000379996 TUBA8Q9NY65 449 aaPredicted RBP7.54□□□□□ -1.2
CDKL5-202ENST00000379996 ACTR3BQ9P1U1 418 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms