RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 FKBP9P1Q75LS8 142 aa16.24■□□□□ 0.19
PCDHA1-201ENST00000378133 GOLGA7Q7Z5G4 137 aa16.24■□□□□ 0.19
PCDHA1-201ENST00000378133 OR5K1Q8NHB7 308 aa16.24■□□□□ 0.19
PCDHA1-201ENST00000378133 MCFD2Q8NI22 146 aa16.24■□□□□ 0.19
PCDHA1-201ENST00000378133 THUMPD3Q9BV44 507 aaKnown RBP16.24■□□□□ 0.19
PCDHA1-201ENST00000378133 PARVBQ9HBI1 364 aa16.24■□□□□ 0.19
PCDHA1-201ENST00000378133 AASSQ9UDR5 926 aa16.24■□□□□ 0.19
PCDHA1-201ENST00000378133 TPRKBQ9Y3C4 175 aa16.24■□□□□ 0.19
PCDHA1-201ENST00000378133 HTTP42858 3142 aa16.23■□□□□ 0.19
PCDHA1-201ENST00000378133 GRXCR2A6NFK2 248 aa16.23■□□□□ 0.19
PCDHA1-201ENST00000378133 OR6C75A6NL08 312 aa16.23■□□□□ 0.19
PCDHA1-201ENST00000378133 PRKD3O94806 890 aa16.23■□□□□ 0.19
PCDHA1-201ENST00000378133 RHOCP08134 193 aa16.23■□□□□ 0.19
PCDHA1-201ENST00000378133 ZDHHC11BP0C7U3 371 aa16.23■□□□□ 0.19
PCDHA1-201ENST00000378133 PSMA3P25788 255 aa16.23■□□□□ 0.19
PCDHA1-201ENST00000378133 ATP5C1P36542 298 aaKnown RBP16.23■□□□□ 0.19
PCDHA1-201ENST00000378133 CLCN4P51793 760 aa16.23■□□□□ 0.19
PCDHA1-201ENST00000378133 CLCN7P51798 805 aa16.23■□□□□ 0.19
PCDHA1-201ENST00000378133 PHC1P78364 1004 aa16.23■□□□□ 0.19
PCDHA1-201ENST00000378133 CAP1Q01518 475 aa16.23■□□□□ 0.19
PCDHA1-201ENST00000378133 MBTPS1Q14703 1052 aa16.23■□□□□ 0.19
PCDHA1-201ENST00000378133 SYT6Q5T7P8 510 aaPredicted RBP16.23■□□□□ 0.19
PCDHA1-201ENST00000378133 C16orf59Q7L2K0 433 aa16.23■□□□□ 0.19
PCDHA1-201ENST00000378133 SVOPQ8N4V2 548 aa16.23■□□□□ 0.19
PCDHA1-201ENST00000378133 OR10A6Q8NH74 314 aa16.23■□□□□ 0.19
PCDHA1-201ENST00000378133 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.23■□□□□ 0.19
PCDHA1-201ENST00000378133 VAPAQ9P0L0 249 aa16.23■□□□□ 0.19
PCDHA1-201ENST00000378133 INVSQ9Y283 1065 aa16.23■□□□□ 0.19
PCDHA1-201ENST00000378133 TESMINQ9Y4I5 508 aa16.23■□□□□ 0.19
PCDHA1-201ENST00000378133 ILVBLA1L0T0 632 aa16.23■□□□□ 0.19
PCDHA1-201ENST00000378133 H0Y626 953 aa16.23■□□□□ 0.19
PCDHA1-201ENST00000378133 ARNTLO00327 626 aa16.23■□□□□ 0.19
PCDHA1-201ENST00000378133 ANKRD28O15084 1053 aa16.23■□□□□ 0.19
PCDHA1-201ENST00000378133 TBX1O43435 398 aa16.23■□□□□ 0.19
PCDHA1-201ENST00000378133 DFNA5O60443 496 aa16.23■□□□□ 0.19
PCDHA1-201ENST00000378133 TRIM16O95361 564 aa16.23■□□□□ 0.19
PCDHA1-201ENST00000378133 GUCA1CO95843 209 aa16.23■□□□□ 0.19
PCDHA1-201ENST00000378133 TGFBR1P36897 503 aa16.23■□□□□ 0.19
PCDHA1-201ENST00000378133 SLC11A2P49281 568 aa16.23■□□□□ 0.19
PCDHA1-201ENST00000378133 IL18R1Q13478 541 aa16.23■□□□□ 0.19
PCDHA1-201ENST00000378133 GTF2H2Q13888 395 aa16.23■□□□□ 0.19
PCDHA1-201ENST00000378133 GTF2H2CQ6P1K8 395 aa16.23■□□□□ 0.19
PCDHA1-201ENST00000378133 RPL3LQ92901 407 aaKnown RBP16.23■□□□□ 0.19
PCDHA1-201ENST00000378133 FAM162AQ96A26 154 aa16.23■□□□□ 0.19
PCDHA1-201ENST00000378133 ADGRE3Q9BY15 652 aa16.23■□□□□ 0.19
PCDHA1-201ENST00000378133 HCSTQ9UBK5 93 aa16.23■□□□□ 0.19
PCDHA1-201ENST00000378133 DNMT3LQ9UJW3 386 aa16.23■□□□□ 0.19
PCDHA1-201ENST00000378133 FBXO10Q9UK96 956 aa16.23■□□□□ 0.19
PCDHA1-201ENST00000378133 NT5C1B-RDH14C9J2C7 533 aa16.22■□□□□ 0.19
PCDHA1-201ENST00000378133 KCNK2O95069 426 aa16.22■□□□□ 0.19
PCDHA1-201ENST00000378133 PRAMEF12O95522 483 aa16.22■□□□□ 0.19
PCDHA1-201ENST00000378133 S100BP04271 92 aaPredicted RBP16.22■□□□□ 0.19
PCDHA1-201ENST00000378133 CKBP12277 381 aa16.22■□□□□ 0.19
PCDHA1-201ENST00000378133 SLC2A4P14672 509 aa16.22■□□□□ 0.19
PCDHA1-201ENST00000378133 ITGB6P18564 788 aa16.22■□□□□ 0.19
PCDHA1-201ENST00000378133 BMPR1AP36894 532 aa16.22■□□□□ 0.19
PCDHA1-201ENST00000378133 PIK3CGP48736 1102 aa16.22■□□□□ 0.19
PCDHA1-201ENST00000378133 GPR17Q13304 367 aa16.22■□□□□ 0.19
PCDHA1-201ENST00000378133 FAM209AQ5JX71 171 aa16.22■□□□□ 0.19
PCDHA1-201ENST00000378133 B3GNT8Q7Z7M8 397 aa16.22■□□□□ 0.19
PCDHA1-201ENST00000378133 OR8J3Q8NGG0 315 aa16.22■□□□□ 0.19
PCDHA1-201ENST00000378133 ZHX1-C8orf76Q96EF9 292 aa16.22■□□□□ 0.19
PCDHA1-201ENST00000378133 REXO5Q96IC2 774 aaKnown RBP16.22■□□□□ 0.19
PCDHA1-201ENST00000378133 SPATA17Q96L03 361 aa16.22■□□□□ 0.19
PCDHA1-201ENST00000378133 CCDC115Q96NT0 180 aa16.22■□□□□ 0.19
PCDHA1-201ENST00000378133 IPPKQ9H8X2 491 aa16.22■□□□□ 0.19
PCDHA1-201ENST00000378133 GKN1Q9NS71 199 aa16.22■□□□□ 0.19
PCDHA1-201ENST00000378133 SCN3BQ9NY72 215 aa16.22■□□□□ 0.19
PCDHA1-201ENST00000378133 NUDT4Q9NZJ9 180 aa16.22■□□□□ 0.19
PCDHA1-201ENST00000378133 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.22■□□□□ 0.19
PCDHA1-201ENST00000378133 DYRK3O43781 588 aa16.22■□□□□ 0.19
PCDHA1-201ENST00000378133 FADS2O95864 444 aaKnown RBP16.22■□□□□ 0.19
PCDHA1-201ENST00000378133 ESR1P03372 595 aa16.22■□□□□ 0.19
PCDHA1-201ENST00000378133 KLKB1P03952 638 aa16.22■□□□□ 0.19
PCDHA1-201ENST00000378133 PFKLP17858 780 aa16.22■□□□□ 0.19
PCDHA1-201ENST00000378133 CD9P21926 228 aa16.22■□□□□ 0.19
PCDHA1-201ENST00000378133 CCND3P30281 292 aaPredicted RBP16.22■□□□□ 0.19
PCDHA1-201ENST00000378133 PTGER3P43115 390 aa16.22■□□□□ 0.19
PCDHA1-201ENST00000378133 SLC35A2P78381 396 aa16.22■□□□□ 0.19
PCDHA1-201ENST00000378133 TWF1Q12792 350 aa16.22■□□□□ 0.19
PCDHA1-201ENST00000378133 ZNF177Q13360 481 aaPredicted RBP16.22■□□□□ 0.19
PCDHA1-201ENST00000378133 PTGR1Q14914 329 aa16.22■□□□□ 0.19
PCDHA1-201ENST00000378133 STEAP3Q658P3 488 aa16.22■□□□□ 0.19
PCDHA1-201ENST00000378133 VASH1Q7L8A9 365 aaPredicted RBP16.22■□□□□ 0.19
PCDHA1-201ENST00000378133 PRSS48Q7RTY5 328 aa16.22■□□□□ 0.19
PCDHA1-201ENST00000378133 GALNT5Q7Z7M9 940 aa16.22■□□□□ 0.19
PCDHA1-201ENST00000378133 FBLIM1Q8WUP2 373 aa16.22■□□□□ 0.19
PCDHA1-201ENST00000378133 DUSP21Q9H596 190 aa16.22■□□□□ 0.19
PCDHA1-201ENST00000378133 NSUN3Q9H649 340 aaKnown RBP16.22■□□□□ 0.19
PCDHA1-201ENST00000378133 TMEM45AQ9NWC5 275 aa16.22■□□□□ 0.19
PCDHA1-201ENST00000378133 TMEFF2Q9UIK5 374 aaPredicted RBP16.22■□□□□ 0.19
PCDHA1-201ENST00000378133 OSGIN1Q9UJX0 560 aa16.22■□□□□ 0.19
PCDHA1-201ENST00000378133 NEUROG3Q9Y4Z2 214 aa16.22■□□□□ 0.19
PCDHA1-201ENST00000378133 PCDHB14Q9Y5E9 798 aa16.22■□□□□ 0.19
PCDHA1-201ENST00000378133 A6NL46 340 aa16.21■□□□□ 0.19
PCDHA1-201ENST00000378133 SLC38A8A6NNN8 435 aa16.21■□□□□ 0.19
PCDHA1-201ENST00000378133 MITFO75030 526 aaPredicted RBP16.21■□□□□ 0.19
PCDHA1-201ENST00000378133 ATF6P18850 670 aa16.21■□□□□ 0.19
PCDHA1-201ENST00000378133 HSPA7P48741 367 aa16.21■□□□□ 0.19
PCDHA1-201ENST00000378133 FLT3LGP49771 235 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms