RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 FER1L6Q2WGJ9 1857 aa14.16□□□□□ -0.14
TCOF1-202ENST00000377797 ANKRD12Q6UB98 2062 aa14.16□□□□□ -0.14
TCOF1-202ENST00000377797 SLC28A2O43868 658 aa14.16□□□□□ -0.14
TCOF1-202ENST00000377797 ITGA2P17301 1181 aa14.16□□□□□ -0.14
TCOF1-202ENST00000377797 NELFEP18615 380 aaKnown RBP14.16□□□□□ -0.14
TCOF1-202ENST00000377797 HOXC8P31273 242 aa14.16□□□□□ -0.14
TCOF1-202ENST00000377797 DAB2P98082 770 aa14.16□□□□□ -0.14
TCOF1-202ENST00000377797 HLA-DQA1Q5Y7H0 255 aa14.16□□□□□ -0.14
TCOF1-202ENST00000377797 SUSD1Q6UWL2 747 aa14.16□□□□□ -0.14
TCOF1-202ENST00000377797 HEATR4Q86WZ0 1026 aa14.16□□□□□ -0.14
TCOF1-202ENST00000377797 CDK20Q8IZL9 346 aa14.16□□□□□ -0.14
TCOF1-202ENST00000377797 C11orf65Q8NCR3 313 aa14.16□□□□□ -0.14
TCOF1-202ENST00000377797 GPR150Q8NGU9 434 aa14.16□□□□□ -0.14
TCOF1-202ENST00000377797 HM13Q8TCT9 377 aa14.16□□□□□ -0.14
TCOF1-202ENST00000377797 RAB7BQ96AH8 199 aa14.16□□□□□ -0.14
TCOF1-202ENST00000377797 HIC2Q96JB3 615 aa14.16□□□□□ -0.14
TCOF1-202ENST00000377797 ZFRQ96KR1 1074 aaKnown RBP14.16□□□□□ -0.14
TCOF1-202ENST00000377797 CCDC106Q9BWC9 280 aa14.16□□□□□ -0.14
TCOF1-202ENST00000377797 GRIP2Q9C0E4 1043 aa14.16□□□□□ -0.14
TCOF1-202ENST00000377797 TAC3Q9UHF0 121 aa14.16□□□□□ -0.14
TCOF1-202ENST00000377797 A0A1W2PP18 115 aa14.16□□□□□ -0.14
TCOF1-202ENST00000377797 GPR39O43194 453 aa14.16□□□□□ -0.14
TCOF1-202ENST00000377797 CNOT3O75175 753 aaKnown RBP14.16□□□□□ -0.14
TCOF1-202ENST00000377797 SERPINB7O75635 380 aa14.16□□□□□ -0.14
TCOF1-202ENST00000377797 CXCL10P02778 98 aa14.16□□□□□ -0.14
TCOF1-202ENST00000377797 CYP4F3Q08477 520 aa14.16□□□□□ -0.14
TCOF1-202ENST00000377797 SP140Q13342 867 aa14.16□□□□□ -0.14
TCOF1-202ENST00000377797 CASP12Q6UXS9 341 aa14.16□□□□□ -0.14
TCOF1-202ENST00000377797 MYLIPQ8WY64 445 aa14.16□□□□□ -0.14
TCOF1-202ENST00000377797 FUBP1Q96AE4 644 aaKnown RBP14.16□□□□□ -0.14
TCOF1-202ENST00000377797 SPATA5L1Q9BVQ7 753 aa14.16□□□□□ -0.14
TCOF1-202ENST00000377797 EBF2Q9HAK2 575 aa14.16□□□□□ -0.14
TCOF1-202ENST00000377797 RAPGEFL1Q9UHV5 662 aa14.16□□□□□ -0.14
TCOF1-202ENST00000377797 DOCK3Q8IZD9 2030 aa14.16□□□□□ -0.14
TCOF1-202ENST00000377797 PSMB9P28065 219 aa14.16□□□□□ -0.14
TCOF1-202ENST00000377797 OR52B6Q8NGF0 335 aa14.16□□□□□ -0.14
TCOF1-202ENST00000377797 SMPDL3AQ92484 453 aa14.16□□□□□ -0.14
TCOF1-202ENST00000377797 FGF13Q92913 245 aa14.16□□□□□ -0.14
TCOF1-202ENST00000377797 PTERQ96BW5 349 aa14.16□□□□□ -0.14
TCOF1-202ENST00000377797 CGREF1Q99674 301 aa14.16□□□□□ -0.14
TCOF1-202ENST00000377797 C3orf14Q9HBI5 128 aa14.16□□□□□ -0.14
TCOF1-202ENST00000377797 INTS7Q9NVH2 962 aaKnown RBP14.16□□□□□ -0.14
TCOF1-202ENST00000377797 EMCNQ9ULC0 261 aa14.16□□□□□ -0.14
TCOF1-202ENST00000377797 TPRKBQ9Y3C4 175 aa14.16□□□□□ -0.14
TCOF1-202ENST00000377797 PTGDR2Q9Y5Y4 395 aa14.16□□□□□ -0.14
TCOF1-202ENST00000377797 DOCK5Q9H7D0 1870 aa14.16□□□□□ -0.14
TCOF1-202ENST00000377797 KMOO15229 486 aa14.15□□□□□ -0.14
TCOF1-202ENST00000377797 HSD17B2P37059 387 aa14.15□□□□□ -0.14
TCOF1-202ENST00000377797 ZNF140P52738 457 aaPredicted RBP14.15□□□□□ -0.14
TCOF1-202ENST00000377797 DENND5AQ6IQ26 1287 aa14.15□□□□□ -0.14
TCOF1-202ENST00000377797 SLC2A7Q6PXP3 512 aa14.15□□□□□ -0.14
TCOF1-202ENST00000377797 TEX26Q8N6G2 289 aa14.15□□□□□ -0.14
TCOF1-202ENST00000377797 SLC43A3Q8NBI5 491 aa14.15□□□□□ -0.14
TCOF1-202ENST00000377797 LMLNQ96KR4 655 aa14.15□□□□□ -0.14
TCOF1-202ENST00000377797 NSMCE3Q96MG7 304 aa14.15□□□□□ -0.14
TCOF1-202ENST00000377797 TRAPPC9Q96Q05 1148 aa14.15□□□□□ -0.14
TCOF1-202ENST00000377797 PRRG3Q9BZD7 231 aa14.15□□□□□ -0.14
TCOF1-202ENST00000377797 NOL6Q9H6R4 1146 aaKnown RBP14.15□□□□□ -0.14
TCOF1-202ENST00000377797 CNOT6Q9ULM6 557 aaKnown RBP14.15□□□□□ -0.14
TCOF1-202ENST00000377797 KLHL20Q9Y2M5 609 aa14.15□□□□□ -0.14
TCOF1-202ENST00000377797 SH3GLB1Q9Y371 365 aa14.15□□□□□ -0.14
TCOF1-202ENST00000377797 IGLV3-25P01717 112 aa14.15□□□□□ -0.14
TCOF1-202ENST00000377797 HSMCR30P0CW71 290 aa14.15□□□□□ -0.14
TCOF1-202ENST00000377797 UMPSP11172 480 aa14.15□□□□□ -0.14
TCOF1-202ENST00000377797 ARSAP15289 507 aa14.15□□□□□ -0.14
TCOF1-202ENST00000377797 ARCN1P48444 511 aaKnown RBP14.15□□□□□ -0.14
TCOF1-202ENST00000377797 EMX2Q04743 252 aa14.15□□□□□ -0.14
TCOF1-202ENST00000377797 GNA13Q14344 377 aa14.15□□□□□ -0.14
TCOF1-202ENST00000377797 HKDC1Q2TB90 917 aa14.15□□□□□ -0.14
TCOF1-202ENST00000377797 TRIM69Q86WT6 500 aa14.15□□□□□ -0.14
TCOF1-202ENST00000377797 FAM129CQ86XR2 697 aa14.15□□□□□ -0.14
TCOF1-202ENST00000377797 MAPK15Q8TD08 544 aa14.15□□□□□ -0.14
TCOF1-202ENST00000377797 PLEKHG4BQ96PX9 1271 aa14.15□□□□□ -0.14
TCOF1-202ENST00000377797 EQTNQ9NQ60 294 aa14.15□□□□□ -0.14
TCOF1-202ENST00000377797 KLHL3Q9UH77 587 aa14.15□□□□□ -0.14
TCOF1-202ENST00000377797 OARD1Q9Y530 152 aa14.15□□□□□ -0.14
TCOF1-202ENST00000377797 CCDC189A1A4V9 331 aa14.15□□□□□ -0.14
TCOF1-202ENST00000377797 SCELO95171 688 aa14.15□□□□□ -0.14
TCOF1-202ENST00000377797 SLC35G6P0C7Q6 338 aa14.15□□□□□ -0.14
TCOF1-202ENST00000377797 C1QTNF8P60827 252 aa14.15□□□□□ -0.14
TCOF1-202ENST00000377797 RPS7P62081 194 aaKnown RBP14.15□□□□□ -0.14
TCOF1-202ENST00000377797 LRRC32Q14392 662 aa14.15□□□□□ -0.14
TCOF1-202ENST00000377797 GRB7Q14451 532 aa14.15□□□□□ -0.14
TCOF1-202ENST00000377797 TNFAIP8L3Q5GJ75 292 aa14.15□□□□□ -0.14
TCOF1-202ENST00000377797 CNTN4Q8IWV2 1026 aa14.15□□□□□ -0.14
TCOF1-202ENST00000377797 KDM1BQ8NB78 822 aa14.15□□□□□ -0.14
TCOF1-202ENST00000377797 TSTD1Q8NFU3 115 aa14.15□□□□□ -0.14
TCOF1-202ENST00000377797 BTN2A2Q8WVV5 523 aa14.15□□□□□ -0.14
TCOF1-202ENST00000377797 SLC7A6OSQ96CW6 309 aaPredicted RBP14.15□□□□□ -0.14
TCOF1-202ENST00000377797 ASB9Q96DX5 294 aa14.15□□□□□ -0.14
TCOF1-202ENST00000377797 NR1H4Q96RI1 486 aaPredicted RBP14.15□□□□□ -0.14
TCOF1-202ENST00000377797 ZNF607Q96SK3 696 aa14.15□□□□□ -0.14
TCOF1-202ENST00000377797 WDR83Q9BRX9 315 aaKnown RBP14.15□□□□□ -0.14
TCOF1-202ENST00000377797 MRPS30Q9NP92 439 aaKnown RBP14.15□□□□□ -0.14
TCOF1-202ENST00000377797 FBXW2Q9UKT8 454 aa14.15□□□□□ -0.14
TCOF1-202ENST00000377797 ITM2BQ9Y287 266 aa14.15□□□□□ -0.14
TCOF1-202ENST00000377797 PIPSLA2A3N6 862 aa14.15□□□□□ -0.14
TCOF1-202ENST00000377797 ERN1O75460 977 aaKnown RBP14.15□□□□□ -0.14
TCOF1-202ENST00000377797 ADH1BP00325 375 aa14.15□□□□□ -0.14
TCOF1-202ENST00000377797 MTHFD1P11586 935 aaKnown RBP14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms