RNA–Protein interactions for RNA: ENST00000377017.5

TIMP1-202, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 2 BASIC

Gene TIMP1, Length 626 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-202ENST00000377017 ERGP11308 486 aa12.77□□□□□ -0.37
TIMP1-202ENST00000377017 GFAPP14136 432 aa12.77□□□□□ -0.37
TIMP1-202ENST00000377017 NCF1P14598 390 aaPredicted RBP12.77□□□□□ -0.37
TIMP1-202ENST00000377017 CCND1P24385 295 aa12.77□□□□□ -0.37
TIMP1-202ENST00000377017 CAPZBP47756 277 aa12.77□□□□□ -0.37
TIMP1-202ENST00000377017 ACADVLP49748 655 aa12.77□□□□□ -0.37
TIMP1-202ENST00000377017 PNLIPRP1P54315 467 aa12.77□□□□□ -0.37
TIMP1-202ENST00000377017 E2F1Q01094 437 aa12.77□□□□□ -0.37
TIMP1-202ENST00000377017 GRB7Q14451 532 aa12.77□□□□□ -0.37
TIMP1-202ENST00000377017 CYP2A13Q16696 494 aa12.77□□□□□ -0.37
TIMP1-202ENST00000377017 CLPPQ16740 277 aaPredicted RBP12.77□□□□□ -0.37
TIMP1-202ENST00000377017 CCSMST1Q4G0I0 132 aa12.77□□□□□ -0.37
TIMP1-202ENST00000377017 HSP90B2PQ58FF3 399 aa12.77□□□□□ -0.37
TIMP1-202ENST00000377017 PERM1Q5SV97 790 aa12.77□□□□□ -0.37
TIMP1-202ENST00000377017 SULT1C3Q6IMI6 304 aa12.77□□□□□ -0.37
TIMP1-202ENST00000377017 SPRED1Q7Z699 444 aa12.77□□□□□ -0.37
TIMP1-202ENST00000377017 Q8N9G6 341 aaPredicted RBP12.77□□□□□ -0.37
TIMP1-202ENST00000377017 CCDC63Q8NA47 563 aa12.77□□□□□ -0.37
TIMP1-202ENST00000377017 DEFB124Q8NES8 71 aa12.77□□□□□ -0.37
TIMP1-202ENST00000377017 HMGCLL1Q8TB92 370 aa12.77□□□□□ -0.37
TIMP1-202ENST00000377017 SMPDL3AQ92484 453 aa12.77□□□□□ -0.37
TIMP1-202ENST00000377017 SLC22A18Q96BI1 424 aa12.77□□□□□ -0.37
TIMP1-202ENST00000377017 ATP6V1G3Q96LB4 118 aa12.77□□□□□ -0.37
TIMP1-202ENST00000377017 DPYSL5Q9BPU6 564 aa12.77□□□□□ -0.37
TIMP1-202ENST00000377017 ABCG4Q9H172 646 aa12.77□□□□□ -0.37
TIMP1-202ENST00000377017 CNOT10Q9H9A5 744 aaKnown RBP12.77□□□□□ -0.37
TIMP1-202ENST00000377017 ZNF358Q9NW07 568 aa12.77□□□□□ -0.37
TIMP1-202ENST00000377017 WWOXQ9NZC7 414 aa12.77□□□□□ -0.37
TIMP1-202ENST00000377017 TMEM216Q9P0N5 145 aa12.77□□□□□ -0.37
TIMP1-202ENST00000377017 STOX2Q9P2F5 926 aaPredicted RBP12.77□□□□□ -0.37
TIMP1-202ENST00000377017 CPSF2Q9P2I0 782 aaKnown RBP12.77□□□□□ -0.37
TIMP1-202ENST00000377017 CIDEBQ9UHD4 219 aa12.77□□□□□ -0.37
TIMP1-202ENST00000377017 PCDHGA1Q9Y5H4 931 aa12.77□□□□□ -0.37
TIMP1-202ENST00000377017 ENTPD2Q9Y5L3 495 aa12.77□□□□□ -0.37
TIMP1-202ENST00000377017 FRYLO94915 3013 aa12.76□□□□□ -0.37
TIMP1-202ENST00000377017 GVINP1Q7Z2Y8 2422 aa12.76□□□□□ -0.37
TIMP1-202ENST00000377017 PIPSLA2A3N6 862 aa12.76□□□□□ -0.37
TIMP1-202ENST00000377017 OR6C74A6NCV1 312 aa12.76□□□□□ -0.37
TIMP1-202ENST00000377017 OR5K3A6NET4 321 aa12.76□□□□□ -0.37
TIMP1-202ENST00000377017 C2orf74A8MZ97 194 aa12.76□□□□□ -0.37
TIMP1-202ENST00000377017 TK2O00142 265 aa12.76□□□□□ -0.37
TIMP1-202ENST00000377017 TM9SF1O15321 606 aa12.76□□□□□ -0.37
TIMP1-202ENST00000377017 PRPF4O43172 522 aaKnown RBP eCLIP12.76□□□□□ -0.37
TIMP1-202ENST00000377017 SPAG7O75391 227 aa12.76□□□□□ -0.37
TIMP1-202ENST00000377017 IPO13O94829 963 aaKnown RBP12.76□□□□□ -0.37
TIMP1-202ENST00000377017 ZWINTO95229 277 aa12.76□□□□□ -0.37
TIMP1-202ENST00000377017 CEACAM1P13688 526 aa12.76□□□□□ -0.37
TIMP1-202ENST00000377017 TYRP1P17643 537 aa12.76□□□□□ -0.37
TIMP1-202ENST00000377017 IMPA1P29218 277 aa12.76□□□□□ -0.37
TIMP1-202ENST00000377017 OR1D5P58170 312 aa12.76□□□□□ -0.37
TIMP1-202ENST00000377017 MAGOHP61326 146 aaKnown RBP12.76□□□□□ -0.37
TIMP1-202ENST00000377017 KIR2DS3Q14952 304 aa12.76□□□□□ -0.37
TIMP1-202ENST00000377017 AMZ1Q400G9 498 aa12.76□□□□□ -0.37
TIMP1-202ENST00000377017 AGTRAPQ6RW13 159 aa12.76□□□□□ -0.37
TIMP1-202ENST00000377017 CDHR3Q6ZTQ4 885 aa12.76□□□□□ -0.37
TIMP1-202ENST00000377017 RAB44Q7Z6P3 723 aaPredicted RBP12.76□□□□□ -0.37
TIMP1-202ENST00000377017 PLXDC1Q8IUK5 500 aa12.76□□□□□ -0.37
TIMP1-202ENST00000377017 FBXO39Q8N4B4 442 aa12.76□□□□□ -0.37
TIMP1-202ENST00000377017 PDPRQ8NCN5 879 aa12.76□□□□□ -0.37
TIMP1-202ENST00000377017 RDH11Q8TC12 318 aa12.76□□□□□ -0.37
TIMP1-202ENST00000377017 ZNF480Q8WV37 535 aa12.76□□□□□ -0.37
TIMP1-202ENST00000377017 JPH3Q8WXH2 748 aaPredicted RBP12.76□□□□□ -0.37
TIMP1-202ENST00000377017 RHBDF1Q96CC6 855 aa12.76□□□□□ -0.37
TIMP1-202ENST00000377017 TLCD1Q96CP7 247 aa12.76□□□□□ -0.37
TIMP1-202ENST00000377017 IL17FQ96PD4 163 aa12.76□□□□□ -0.37
TIMP1-202ENST00000377017 RTKNQ9BST9 563 aa12.76□□□□□ -0.37
TIMP1-202ENST00000377017 MENTQ9BUN1 341 aa12.76□□□□□ -0.37
TIMP1-202ENST00000377017 PCBD2Q9H0N5 130 aa12.76□□□□□ -0.37
TIMP1-202ENST00000377017 LRRN3Q9H3W5 708 aa12.76□□□□□ -0.37
TIMP1-202ENST00000377017 XKR8Q9H6D3 395 aa12.76□□□□□ -0.37
TIMP1-202ENST00000377017 SYNDIG1Q9H7V2 258 aa12.76□□□□□ -0.37
TIMP1-202ENST00000377017 KCNK9Q9NPC2 374 aa12.76□□□□□ -0.37
TIMP1-202ENST00000377017 CCDC177Q9NQR7 707 aaPredicted RBP12.76□□□□□ -0.37
TIMP1-202ENST00000377017 HRASLS2Q9NWW9 162 aa12.76□□□□□ -0.37
TIMP1-202ENST00000377017 PLLPQ9Y342 182 aa12.76□□□□□ -0.37
TIMP1-202ENST00000377017 ZNF292O60281 2723 aa12.75□□□□□ -0.37
TIMP1-202ENST00000377017 GSAPA4D1B5 854 aa12.75□□□□□ -0.37
TIMP1-202ENST00000377017 UBXN8O00124 270 aa12.75□□□□□ -0.37
TIMP1-202ENST00000377017 TYROBPO43914 113 aa12.75□□□□□ -0.37
TIMP1-202ENST00000377017 PLIN3O60664 434 aa12.75□□□□□ -0.37
TIMP1-202ENST00000377017 CCNDBP1O95273 360 aa12.75□□□□□ -0.37
TIMP1-202ENST00000377017 FKBP9O95302 570 aa12.75□□□□□ -0.37
TIMP1-202ENST00000377017 CPNE6O95741 557 aa12.75□□□□□ -0.37
TIMP1-202ENST00000377017 RPLP0P05388 317 aaKnown RBP12.75□□□□□ -0.37
TIMP1-202ENST00000377017 CHRM5P08912 532 aaPredicted RBP12.75□□□□□ -0.37
TIMP1-202ENST00000377017 MYL2P10916 166 aa12.75□□□□□ -0.37
TIMP1-202ENST00000377017 POLR2CP19387 275 aaPredicted RBP12.75□□□□□ -0.37
TIMP1-202ENST00000377017 PTPRZ1P23471 2315 aaPredicted RBP12.75□□□□□ -0.37
TIMP1-202ENST00000377017 ALDH18A1P54886 795 aaKnown RBP12.75□□□□□ -0.37
TIMP1-202ENST00000377017 TSTA3Q13630 321 aaPredicted RBP12.75□□□□□ -0.37
TIMP1-202ENST00000377017 RSPO4Q2I0M5 234 aaPredicted RBP12.75□□□□□ -0.37
TIMP1-202ENST00000377017 THEMIS2Q5TEJ8 643 aa12.75□□□□□ -0.37
TIMP1-202ENST00000377017 CAPN13Q6MZZ7 669 aaPredicted RBP12.75□□□□□ -0.37
TIMP1-202ENST00000377017 C16orf46Q6P387 395 aa12.75□□□□□ -0.37
TIMP1-202ENST00000377017 WDR74Q6RFH5 385 aaPredicted RBP12.75□□□□□ -0.37
TIMP1-202ENST00000377017 MBOAT1Q6ZNC8 495 aa12.75□□□□□ -0.37
TIMP1-202ENST00000377017 ALYREFQ86V81 257 aaKnown RBP12.75□□□□□ -0.37
TIMP1-202ENST00000377017 SLC22A9Q8IVM8 553 aa12.75□□□□□ -0.37
TIMP1-202ENST00000377017 TCP10LQ8TDR4 215 aa12.75□□□□□ -0.37
TIMP1-202ENST00000377017 DENND1AQ8TEH3 1009 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms