RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 TXLNGQ9NUQ3 528 aa13.7□□□□□ -0.22
NELFE-201ENST00000375425 EURLQ9NYK6 297 aa13.7□□□□□ -0.22
NELFE-201ENST00000375425 IFT80Q9P2H3 777 aaPredicted RBP13.7□□□□□ -0.22
NELFE-201ENST00000375425 GPN3Q9UHW5 284 aaPredicted RBP13.7□□□□□ -0.22
NELFE-201ENST00000375425 GNPTGQ9UJJ9 305 aa13.7□□□□□ -0.22
NELFE-201ENST00000375425 SLC39A10Q9ULF5 831 aa13.7□□□□□ -0.22
NELFE-201ENST00000375425 ZNF451Q9Y4E5 1061 aa13.7□□□□□ -0.22
NELFE-201ENST00000375425 MED13Q9UHV7 2174 aa13.69□□□□□ -0.22
NELFE-201ENST00000375425 TCRBV7S3A2A0A539 114 aa13.69□□□□□ -0.22
NELFE-201ENST00000375425 VAPBO95292 243 aa13.69□□□□□ -0.22
NELFE-201ENST00000375425 S1PR4O95977 384 aa13.69□□□□□ -0.22
NELFE-201ENST00000375425 ALAS2P22557 587 aa13.69□□□□□ -0.22
NELFE-201ENST00000375425 ARNTP27540 789 aa13.69□□□□□ -0.22
NELFE-201ENST00000375425 OTX2P32243 289 aa13.69□□□□□ -0.22
NELFE-201ENST00000375425 GRIA3P42263 894 aa13.69□□□□□ -0.22
NELFE-201ENST00000375425 TERF1P54274 439 aa13.69□□□□□ -0.22
NELFE-201ENST00000375425 RRADP55042 308 aa13.69□□□□□ -0.22
NELFE-201ENST00000375425 SLC9A5Q14940 896 aa13.69□□□□□ -0.22
NELFE-201ENST00000375425 TMED2Q15363 201 aa13.69□□□□□ -0.22
NELFE-201ENST00000375425 SF1Q15637 639 aaKnown RBP13.69□□□□□ -0.22
NELFE-201ENST00000375425 LRRC8BQ6P9F7 803 aa13.69□□□□□ -0.22
NELFE-201ENST00000375425 TTC23LQ6PF05 361 aa13.69□□□□□ -0.22
NELFE-201ENST00000375425 OTOAQ7RTW8 1153 aa13.69□□□□□ -0.22
NELFE-201ENST00000375425 TAX1BP1Q86VP1 789 aa13.69□□□□□ -0.22
NELFE-201ENST00000375425 RAB43Q86YS6 212 aa13.69□□□□□ -0.22
NELFE-201ENST00000375425 MCATQ8IVS2 390 aaKnown RBP13.69□□□□□ -0.22
NELFE-201ENST00000375425 MPP5Q8N3R9 675 aa13.69□□□□□ -0.22
NELFE-201ENST00000375425 TRIM58Q8NG06 486 aa13.69□□□□□ -0.22
NELFE-201ENST00000375425 OR2L8Q8NGY9 312 aa13.69□□□□□ -0.22
NELFE-201ENST00000375425 GSDMBQ8TAX9 411 aa13.69□□□□□ -0.22
NELFE-201ENST00000375425 PROKR1Q8TCW9 393 aa13.69□□□□□ -0.22
NELFE-201ENST00000375425 SKA2Q8WVK7 121 aaPredicted RBP13.69□□□□□ -0.22
NELFE-201ENST00000375425 NDC1Q9BTX1 674 aa13.69□□□□□ -0.22
NELFE-201ENST00000375425 NUDT9Q9BW91 350 aa13.69□□□□□ -0.22
NELFE-201ENST00000375425 HOMER3Q9NSC5 361 aa13.69□□□□□ -0.22
NELFE-201ENST00000375425 SYBUQ9NX95 663 aa13.69□□□□□ -0.22
NELFE-201ENST00000375425 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.69□□□□□ -0.22
NELFE-201ENST00000375425 TTC7AQ9ULT0 858 aaPredicted RBP13.69□□□□□ -0.22
NELFE-201ENST00000375425 SRPK3Q9UPE1 567 aa13.69□□□□□ -0.22
NELFE-201ENST00000375425 PTRH2Q9Y3E5 179 aaKnown RBP13.69□□□□□ -0.22
NELFE-201ENST00000375425 PCDHGB7Q9Y5F8 929 aa13.69□□□□□ -0.22
NELFE-201ENST00000375425 GOLGA8KD6RF30 607 aa13.68□□□□□ -0.22
NELFE-201ENST00000375425 GOLGA8TH3BQL2 631 aa13.68□□□□□ -0.22
NELFE-201ENST00000375425 RASGRF2O14827 1237 aa13.68□□□□□ -0.22
NELFE-201ENST00000375425 KPNA5O15131 536 aa13.68□□□□□ -0.22
NELFE-201ENST00000375425 CD63P08962 238 aa13.68□□□□□ -0.22
NELFE-201ENST00000375425 TPSB2P20231 275 aa13.68□□□□□ -0.22
NELFE-201ENST00000375425 RPS3P23396 243 aaKnown RBP eCLIP13.68□□□□□ -0.223e-6■■□□□ 13.8
NELFE-201ENST00000375425 CDK16Q00536 496 aa13.68□□□□□ -0.22
NELFE-201ENST00000375425 TRIP13Q15645 432 aaPredicted RBP13.68□□□□□ -0.22
NELFE-201ENST00000375425 TPSAB1Q15661 275 aa13.68□□□□□ -0.22
NELFE-201ENST00000375425 NKAIN1Q4KMZ8 207 aa13.68□□□□□ -0.22
NELFE-201ENST00000375425 FCRL6Q6DN72 434 aa13.68□□□□□ -0.22
NELFE-201ENST00000375425 MRPL14Q6P1L8 145 aaKnown RBP13.68□□□□□ -0.22
NELFE-201ENST00000375425 FIGLAQ6QHK4 219 aa13.68□□□□□ -0.22
NELFE-201ENST00000375425 SDCCAG8Q86SQ7 713 aaPredicted RBP13.68□□□□□ -0.22
NELFE-201ENST00000375425 ATCAYQ86WG3 371 aa13.68□□□□□ -0.22
NELFE-201ENST00000375425 LRRC6Q86X45 466 aa13.68□□□□□ -0.22
NELFE-201ENST00000375425 OTUD6BQ8N6M0 293 aa13.68□□□□□ -0.22
NELFE-201ENST00000375425 CPT1CQ8TCG5 803 aa13.68□□□□□ -0.22
NELFE-201ENST00000375425 BIRC8Q96P09 236 aa13.68□□□□□ -0.22
NELFE-201ENST00000375425 MRM3Q9HC36 420 aaKnown RBP13.68□□□□□ -0.22
NELFE-201ENST00000375425 NDOR1Q9UHB4 597 aa13.68□□□□□ -0.22
NELFE-201ENST00000375425 G3BP2Q9UN86 482 aaKnown RBP13.68□□□□□ -0.22
NELFE-201ENST00000375425 NFS1Q9Y697 457 aa13.68□□□□□ -0.22
NELFE-201ENST00000375425 PRICKLE3O43900 615 aaPredicted RBP13.67□□□□□ -0.22
NELFE-201ENST00000375425 CNOT3O75175 753 aaKnown RBP13.67□□□□□ -0.22
NELFE-201ENST00000375425 AVILO75366 819 aa13.67□□□□□ -0.22
NELFE-201ENST00000375425 C1orf105O95561 183 aa13.67□□□□□ -0.22
NELFE-201ENST00000375425 FMO4P31512 558 aa13.67□□□□□ -0.22
NELFE-201ENST00000375425 FOLR3P41439 243 aa13.67□□□□□ -0.22
NELFE-201ENST00000375425 EIF3BP55884 814 aaKnown RBP13.67□□□□□ -0.22
NELFE-201ENST00000375425 FOXL2P58012 376 aa13.67□□□□□ -0.22
NELFE-201ENST00000375425 SRSF1Q07955 248 aaKnown RBP eCLIP13.67□□□□□ -0.222e-8■■□□□ 13.2
NELFE-201ENST00000375425 RAPSNQ13702 412 aa13.67□□□□□ -0.22
NELFE-201ENST00000375425 CCSMST1Q4G0I0 132 aa13.67□□□□□ -0.22
NELFE-201ENST00000375425 CTSL3PQ5NE16 218 aa13.67□□□□□ -0.22
NELFE-201ENST00000375425 MRNIPQ6NTE8 343 aa13.67□□□□□ -0.22
NELFE-201ENST00000375425 TTLL10Q6ZVT0 673 aa13.67□□□□□ -0.22
NELFE-201ENST00000375425 PRELID2Q8N945 189 aa13.67□□□□□ -0.22
NELFE-201ENST00000375425 OR2Y1Q8NGV0 311 aa13.67□□□□□ -0.22
NELFE-201ENST00000375425 ZUFSPQ96AP4 578 aa13.67□□□□□ -0.22
NELFE-201ENST00000375425 RAD51AP1Q96B01 352 aa13.67□□□□□ -0.22
NELFE-201ENST00000375425 PTERQ96BW5 349 aa13.67□□□□□ -0.22
NELFE-201ENST00000375425 IP6K3Q96PC2 410 aa13.67□□□□□ -0.22
NELFE-201ENST00000375425 MFRPQ9BY79 579 aa13.67□□□□□ -0.22
NELFE-201ENST00000375425 INTS7Q9NVH2 962 aaKnown RBP13.67□□□□□ -0.22
NELFE-201ENST00000375425 GPR83Q9NYM4 423 aa13.67□□□□□ -0.22
NELFE-201ENST00000375425 SOX13Q9UN79 622 aa13.67□□□□□ -0.22
NELFE-201ENST00000375425 RUVBL2Q9Y230 463 aaKnown RBP13.67□□□□□ -0.22
NELFE-201ENST00000375425 CLEC18AA5D8T8 446 aa13.66□□□□□ -0.22
NELFE-201ENST00000375425 KRT87PA6NCN2 255 aa13.66□□□□□ -0.22
NELFE-201ENST00000375425 DPM1O60762 260 aa13.66□□□□□ -0.22
NELFE-201ENST00000375425 VPS4BO75351 444 aa13.66□□□□□ -0.22
NELFE-201ENST00000375425 GCGRP47871 477 aa13.66□□□□□ -0.22
NELFE-201ENST00000375425 VPS41P49754 854 aa13.66□□□□□ -0.22
NELFE-201ENST00000375425 ARSFP54793 590 aa13.66□□□□□ -0.22
NELFE-201ENST00000375425 ZC3H12BQ5HYM0 836 aaKnown RBP13.66□□□□□ -0.22
NELFE-201ENST00000375425 CLEC18BQ6UXF7 455 aa13.66□□□□□ -0.22
NELFE-201ENST00000375425 MRGPREQ86SM8 312 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms