RNA–Protein interactions for RNA: ENST00000368445.9

SHC1-202, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-202ENST00000368445 CLIC3O95833 236 aa13.45□□□□□ -0.26
SHC1-202ENST00000368445 CLPTM1O96005 669 aa13.45□□□□□ -0.26
SHC1-202ENST00000368445 FAM58BPP0C7Q3 252 aa13.45□□□□□ -0.26
SHC1-202ENST00000368445 ETS2P15036 469 aa13.45□□□□□ -0.26
SHC1-202ENST00000368445 MEF2AQ02078 507 aaPredicted RBP13.45□□□□□ -0.26
SHC1-202ENST00000368445 HACD2Q6Y1H2 254 aa13.45□□□□□ -0.26
SHC1-202ENST00000368445 THOC6Q86W42 341 aaKnown RBP13.45□□□□□ -0.26
SHC1-202ENST00000368445 FRS2Q8WU20 508 aa13.45□□□□□ -0.26
SHC1-202ENST00000368445 APIPQ96GX9 242 aa13.45□□□□□ -0.26
SHC1-202ENST00000368445 SUFUQ9UMX1 484 aa13.45□□□□□ -0.26
SHC1-202ENST00000368445 ASF1AQ9Y294 204 aa13.45□□□□□ -0.26
SHC1-202ENST00000368445 RWDD3Q9Y3V2 267 aa13.45□□□□□ -0.26
SHC1-202ENST00000368445 ASPDHA6ND91 283 aa13.45□□□□□ -0.26
SHC1-202ENST00000368445 LDLRP01130 860 aa13.45□□□□□ -0.26
SHC1-202ENST00000368445 PSMA3P25788 255 aa13.45□□□□□ -0.26
SHC1-202ENST00000368445 CASP9P55211 416 aa13.45□□□□□ -0.26
SHC1-202ENST00000368445 SEC13P55735 322 aa13.45□□□□□ -0.26
SHC1-202ENST00000368445 PRKCQQ04759 706 aa13.45□□□□□ -0.26
SHC1-202ENST00000368445 TMEM214Q6NUQ4 689 aaKnown RBP13.45□□□□□ -0.26
SHC1-202ENST00000368445 ZNF786Q8N393 782 aa13.45□□□□□ -0.26
SHC1-202ENST00000368445 TRAM1L1Q8N609 369 aa13.45□□□□□ -0.26
SHC1-202ENST00000368445 PHC3Q8NDX5 983 aa13.45□□□□□ -0.26
SHC1-202ENST00000368445 CXorf40AQ8TE69 158 aa13.45□□□□□ -0.26
SHC1-202ENST00000368445 SLCO4A1Q96BD0 722 aa13.45□□□□□ -0.26
SHC1-202ENST00000368445 ZNF707Q96C28 371 aaPredicted RBP13.45□□□□□ -0.26
SHC1-202ENST00000368445 MRGPRX3Q96LB0 322 aa13.45□□□□□ -0.26
SHC1-202ENST00000368445 BTBD9Q96Q07 612 aa13.45□□□□□ -0.26
SHC1-202ENST00000368445 GRIP2Q9C0E4 1043 aa13.45□□□□□ -0.26
SHC1-202ENST00000368445 NOTCH4Q99466 2003 aa13.45□□□□□ -0.26
SHC1-202ENST00000368445 COL4A6Q14031 1691 aa13.45□□□□□ -0.26
SHC1-202ENST00000368445 ARHGEF33A8MVX0 844 aa13.45□□□□□ -0.26
SHC1-202ENST00000368445 ZNF682O95780 498 aa13.45□□□□□ -0.26
SHC1-202ENST00000368445 SERPIND1P05546 499 aa13.45□□□□□ -0.26
SHC1-202ENST00000368445 MYCLP1P12525 358 aaPredicted RBP13.45□□□□□ -0.26
SHC1-202ENST00000368445 COX7A2P14406 83 aa13.45□□□□□ -0.26
SHC1-202ENST00000368445 PFKLP17858 780 aa13.45□□□□□ -0.26
SHC1-202ENST00000368445 PBX2P40425 430 aa13.45□□□□□ -0.26
SHC1-202ENST00000368445 LRRC23Q53EV4 343 aaPredicted RBP13.45□□□□□ -0.26
SHC1-202ENST00000368445 LDLRAP1Q5SW96 308 aa13.45□□□□□ -0.26
SHC1-202ENST00000368445 OR4F3Q6IEY1 312 aa13.45□□□□□ -0.26
SHC1-202ENST00000368445 STK32CQ86UX6 486 aa13.45□□□□□ -0.26
SHC1-202ENST00000368445 GPR180Q86V85 440 aa13.45□□□□□ -0.26
SHC1-202ENST00000368445 TMEM102Q8N9M5 508 aaPredicted RBP13.45□□□□□ -0.26
SHC1-202ENST00000368445 BIRC7Q96CA5 298 aa13.45□□□□□ -0.26
SHC1-202ENST00000368445 LMLNQ96KR4 655 aa13.45□□□□□ -0.26
SHC1-202ENST00000368445 CCM2Q9BSQ5 444 aa13.45□□□□□ -0.26
SHC1-202ENST00000368445 CHID1Q9BWS9 393 aa13.45□□□□□ -0.26
SHC1-202ENST00000368445 ADGRE2Q9UHX3 823 aa13.45□□□□□ -0.26
SHC1-202ENST00000368445 PLAGL1Q9UM63 463 aa13.45□□□□□ -0.26
SHC1-202ENST00000368445 U3KQV3 271 aa13.45□□□□□ -0.26
SHC1-202ENST00000368445 RFXANKO14593 260 aa13.44□□□□□ -0.26
SHC1-202ENST00000368445 LIN7AO14910 233 aaPredicted RBP13.44□□□□□ -0.26
SHC1-202ENST00000368445 CASQ2O14958 399 aaPredicted RBP13.44□□□□□ -0.26
SHC1-202ENST00000368445 HNRNPRO43390 633 aaKnown RBP13.44□□□□□ -0.26
SHC1-202ENST00000368445 PCCBP05166 539 aa13.44□□□□□ -0.26
SHC1-202ENST00000368445 RPL10P27635 214 aaKnown RBP13.44□□□□□ -0.26
SHC1-202ENST00000368445 COL9A2Q14055 689 aaPredicted RBP13.44□□□□□ -0.26
SHC1-202ENST00000368445 ZNF234Q14588 700 aa13.44□□□□□ -0.26
SHC1-202ENST00000368445 PLEKHS1Q5SXH7 462 aa13.44□□□□□ -0.26
SHC1-202ENST00000368445 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.44□□□□□ -0.26
SHC1-202ENST00000368445 SMARCD2Q92925 531 aa13.44□□□□□ -0.26
SHC1-202ENST00000368445 SDCCAG3Q96C92 435 aa13.44□□□□□ -0.26
SHC1-202ENST00000368445 NUS1Q96E22 293 aa13.44□□□□□ -0.26
SHC1-202ENST00000368445 KXD1Q9BQD3 176 aa13.44□□□□□ -0.26
SHC1-202ENST00000368445 GPATCH1Q9BRR8 931 aaKnown RBP13.44□□□□□ -0.26
SHC1-202ENST00000368445 SLC2A11Q9BYW1 496 aa13.44□□□□□ -0.26
SHC1-202ENST00000368445 BRINP2Q9C0B6 783 aa13.44□□□□□ -0.26
SHC1-202ENST00000368445 SOX17Q9H6I2 414 aaPredicted RBP13.44□□□□□ -0.26
SHC1-202ENST00000368445 SPASTQ9UBP0 616 aa13.44□□□□□ -0.26
SHC1-202ENST00000368445 KCNE2Q9Y6J6 123 aa13.44□□□□□ -0.26
SHC1-202ENST00000368445 MGAT4DA6NG13 374 aa13.44□□□□□ -0.26
SHC1-202ENST00000368445 E7EQ34 232 aa13.44□□□□□ -0.26
SHC1-202ENST00000368445 SH3BP5O60239 455 aa13.44□□□□□ -0.26
SHC1-202ENST00000368445 EPHA5P54756 1037 aa13.44□□□□□ -0.26
SHC1-202ENST00000368445 ADCK2Q7Z695 626 aa13.44□□□□□ -0.26
SHC1-202ENST00000368445 NPAS3Q8IXF0 933 aa13.44□□□□□ -0.26
SHC1-202ENST00000368445 PANX1Q96RD7 426 aa13.44□□□□□ -0.26
SHC1-202ENST00000368445 RPF2Q9H7B2 306 aaKnown RBP13.44□□□□□ -0.26
SHC1-202ENST00000368445 HPS4Q9NQG7 708 aa13.44□□□□□ -0.26
SHC1-202ENST00000368445 ZDHHC7Q9NXF8 308 aa13.44□□□□□ -0.26
SHC1-202ENST00000368445 UBAP1Q9NZ09 502 aa13.44□□□□□ -0.26
SHC1-202ENST00000368445 A6NHS1 94 aa13.44□□□□□ -0.26
SHC1-202ENST00000368445 EVPLLA8MZ36 301 aa13.44□□□□□ -0.26
SHC1-202ENST00000368445 NUAK1O60285 661 aa13.44□□□□□ -0.26
SHC1-202ENST00000368445 POP7O75817 140 aaKnown RBP13.44□□□□□ -0.26
SHC1-202ENST00000368445 ASLP04424 464 aa13.44□□□□□ -0.26
SHC1-202ENST00000368445 C6P13671 934 aa13.44□□□□□ -0.26
SHC1-202ENST00000368445 HNMTP50135 292 aa13.44□□□□□ -0.26
SHC1-202ENST00000368445 PWP1Q13610 501 aa13.44□□□□□ -0.26
SHC1-202ENST00000368445 C2orf27AQ580R0 203 aa13.44□□□□□ -0.26
SHC1-202ENST00000368445 TANGO2Q6ICL3 276 aa13.44□□□□□ -0.26
SHC1-202ENST00000368445 FAM47BQ8NA70 645 aa13.44□□□□□ -0.26
SHC1-202ENST00000368445 NMD3Q96D46 503 aaKnown RBP13.44□□□□□ -0.26
SHC1-202ENST00000368445 NTMT1Q9BV86 223 aa13.44□□□□□ -0.26
SHC1-202ENST00000368445 TRPS1Q9UHF7 1281 aa13.44□□□□□ -0.26
SHC1-202ENST00000368445 PCDHA9Q9Y5H5 950 aa13.44□□□□□ -0.26
SHC1-202ENST00000368445 TCRBV3S1A0A5B6 114 aa13.43□□□□□ -0.26
SHC1-202ENST00000368445 C7orf72A4D263 438 aa13.43□□□□□ -0.26
SHC1-202ENST00000368445 AQP12BA6NM10 295 aa13.43□□□□□ -0.26
SHC1-202ENST00000368445 SOCS2O14508 198 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms