RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 LRRC73Q5JTD7 316 aa15.4■□□□□ 0.06
NUCKS1-201ENST00000367142 CNDP2Q96KP4 475 aaKnown RBP15.4■□□□□ 0.06
NUCKS1-201ENST00000367142 CCM2Q9BSQ5 444 aa15.4■□□□□ 0.06
NUCKS1-201ENST00000367142 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.4■□□□□ 0.06
NUCKS1-201ENST00000367142 B3GNT4Q9C0J1 378 aa15.4■□□□□ 0.06
NUCKS1-201ENST00000367142 TMA7Q9Y2S6 64 aaKnown RBP15.4■□□□□ 0.06
NUCKS1-201ENST00000367142 SAGE2PA6NJ88 616 aa15.4■□□□□ 0.06
NUCKS1-201ENST00000367142 SRPRAP08240 638 aaKnown RBP15.4■□□□□ 0.06
NUCKS1-201ENST00000367142 SCARB2Q14108 478 aa15.4■□□□□ 0.06
NUCKS1-201ENST00000367142 TYSND1Q2T9J0 566 aa15.4■□□□□ 0.06
NUCKS1-201ENST00000367142 GPR33Q49SQ1 333 aa15.4■□□□□ 0.06
NUCKS1-201ENST00000367142 IQCHQ86VS3 1027 aa15.4■□□□□ 0.06
NUCKS1-201ENST00000367142 C7orf26Q96N11 449 aa15.4■□□□□ 0.06
NUCKS1-201ENST00000367142 SCGB3A2Q96PL1 93 aa15.4■□□□□ 0.06
NUCKS1-201ENST00000367142 AIFM2Q9BRQ8 373 aa15.4■□□□□ 0.06
NUCKS1-201ENST00000367142 PCDHGA12O60330 932 aa15.4■□□□□ 0.06
NUCKS1-201ENST00000367142 CRELD2Q6UXH1 353 aaPredicted RBP15.4■□□□□ 0.06
NUCKS1-201ENST00000367142 DCBLD1Q8N8Z6 715 aa15.4■□□□□ 0.06
NUCKS1-201ENST00000367142 FAM46DQ8NEK8 389 aa15.4■□□□□ 0.06
NUCKS1-201ENST00000367142 TVP23BQ9NYZ1 205 aa15.4■□□□□ 0.06
NUCKS1-201ENST00000367142 PCDHGB2Q9Y5G2 931 aa15.4■□□□□ 0.06
NUCKS1-201ENST00000367142 A8MU76 341 aa15.4■□□□□ 0.06
NUCKS1-201ENST00000367142 PIP5K1BO14986 540 aa15.4■□□□□ 0.06
NUCKS1-201ENST00000367142 NDUFS4O43181 175 aa15.4■□□□□ 0.06
NUCKS1-201ENST00000367142 NPHS1O60500 1241 aa15.4■□□□□ 0.06
NUCKS1-201ENST00000367142 IL33O95760 270 aa15.4■□□□□ 0.06
NUCKS1-201ENST00000367142 SCN1BQ07699 218 aa15.4■□□□□ 0.06
NUCKS1-201ENST00000367142 FSTL1Q12841 308 aa15.4■□□□□ 0.06
NUCKS1-201ENST00000367142 ARFRP1Q13795 201 aa15.4■□□□□ 0.06
NUCKS1-201ENST00000367142 IL17AQ16552 155 aa15.4■□□□□ 0.06
NUCKS1-201ENST00000367142 PRAMEF14Q5SWL7 426 aa15.4■□□□□ 0.06
NUCKS1-201ENST00000367142 PRAMEF13Q5VWM6 474 aa15.4■□□□□ 0.06
NUCKS1-201ENST00000367142 PAMR1Q6UXH9 720 aa15.4■□□□□ 0.06
NUCKS1-201ENST00000367142 FSTL5Q8N475 847 aaPredicted RBP15.4■□□□□ 0.06
NUCKS1-201ENST00000367142 PAK6Q9NQU5 681 aaPredicted RBP15.4■□□□□ 0.06
NUCKS1-201ENST00000367142 TDP1Q9NUW8 608 aa15.4■□□□□ 0.06
NUCKS1-201ENST00000367142 CSTBP04080 98 aaKnown RBP15.4■□□□□ 0.06
NUCKS1-201ENST00000367142 JMJD7P0C870 316 aa15.4■□□□□ 0.06
NUCKS1-201ENST00000367142 EIF5AP63241 154 aaKnown RBP15.4■□□□□ 0.06
NUCKS1-201ENST00000367142 KCNJ2P63252 427 aa15.4■□□□□ 0.06
NUCKS1-201ENST00000367142 RIOK2Q9BVS4 552 aaKnown RBP15.4■□□□□ 0.06
NUCKS1-201ENST00000367142 POU2F1P14859 743 aa15.39■□□□□ 0.05
NUCKS1-201ENST00000367142 CDKN1CP49918 316 aaPredicted RBP15.39■□□□□ 0.05
NUCKS1-201ENST00000367142 FAM189A2Q15884 450 aa15.39■□□□□ 0.05
NUCKS1-201ENST00000367142 TNFAIP8L2Q6P589 184 aaPredicted RBP15.39■□□□□ 0.05
NUCKS1-201ENST00000367142 ZNF676Q8N7Q3 588 aa15.39■□□□□ 0.05
NUCKS1-201ENST00000367142 ZNF599Q96NL3 588 aa15.39■□□□□ 0.05
NUCKS1-201ENST00000367142 ZDHHC3Q9NYG2 299 aa15.39■□□□□ 0.05
NUCKS1-201ENST00000367142 CDH22Q9UJ99 828 aa15.39■□□□□ 0.05
NUCKS1-201ENST00000367142 ARVCFO00192 962 aa15.39■□□□□ 0.05
NUCKS1-201ENST00000367142 C4orf46Q504U0 113 aa15.39■□□□□ 0.05
NUCKS1-201ENST00000367142 FBXO48Q5FWF7 155 aa15.39■□□□□ 0.05
NUCKS1-201ENST00000367142 IDNKQ5T6J7 187 aa15.39■□□□□ 0.05
NUCKS1-201ENST00000367142 ZNF613Q6PF04 617 aa15.39■□□□□ 0.05
NUCKS1-201ENST00000367142 OR10A6Q8NH74 314 aa15.39■□□□□ 0.05
NUCKS1-201ENST00000367142 LPGAT1Q92604 370 aa15.39■□□□□ 0.05
NUCKS1-201ENST00000367142 EFCAB11Q9BUY7 163 aa15.39■□□□□ 0.05
NUCKS1-201ENST00000367142 SLCO1B3Q9NPD5 702 aa15.39■□□□□ 0.05
NUCKS1-201ENST00000367142 ZNF221Q9UK13 617 aa15.39■□□□□ 0.05
NUCKS1-201ENST00000367142 LRCH4O75427 683 aa15.39■□□□□ 0.05
NUCKS1-201ENST00000367142 VIPR1P32241 457 aa15.39■□□□□ 0.05
NUCKS1-201ENST00000367142 ZNF41P51814 821 aaPredicted RBP15.39■□□□□ 0.05
NUCKS1-201ENST00000367142 CENPMQ9NSP4 180 aa15.39■□□□□ 0.05
NUCKS1-201ENST00000367142 LYARQ9NX58 379 aaKnown RBP15.39■□□□□ 0.05
NUCKS1-201ENST00000367142 P2RX2Q9UBL9 471 aa15.39■□□□□ 0.05
NUCKS1-201ENST00000367142 YIPF1Q9Y548 306 aa15.39■□□□□ 0.05
NUCKS1-201ENST00000367142 SNX10Q9Y5X0 201 aa15.39■□□□□ 0.05
NUCKS1-201ENST00000367142 DGKBQ9Y6T7 804 aa15.39■□□□□ 0.05
NUCKS1-201ENST00000367142 K7EPI3 171 aa15.39■□□□□ 0.05
NUCKS1-201ENST00000367142 CDKN2BP42772 138 aa15.39■□□□□ 0.05
NUCKS1-201ENST00000367142 ARF3P61204 181 aaPredicted RBP15.39■□□□□ 0.05
NUCKS1-201ENST00000367142 ARF1P84077 181 aaKnown RBP15.39■□□□□ 0.05
NUCKS1-201ENST00000367142 ECM1Q16610 540 aa15.39■□□□□ 0.05
NUCKS1-201ENST00000367142 PPM1JQ5JR12 505 aa15.39■□□□□ 0.05
NUCKS1-201ENST00000367142 SLITRK4Q8IW52 837 aa15.39■□□□□ 0.05
NUCKS1-201ENST00000367142 PYROXD2Q8N2H3 581 aa15.39■□□□□ 0.05
NUCKS1-201ENST00000367142 KLHL36Q8N4N3 616 aa15.39■□□□□ 0.05
NUCKS1-201ENST00000367142 SLC13A3Q8WWT9 602 aa15.39■□□□□ 0.05
NUCKS1-201ENST00000367142 SPOCK2Q92563 424 aa15.39■□□□□ 0.05
NUCKS1-201ENST00000367142 GAL3ST1Q99999 423 aa15.39■□□□□ 0.05
NUCKS1-201ENST00000367142 ASPNQ9BXN1 380 aa15.39■□□□□ 0.05
NUCKS1-201ENST00000367142 EIF2B3Q9NR50 452 aaKnown RBP15.39■□□□□ 0.05
NUCKS1-201ENST00000367142 ARL8BQ9NVJ2 186 aa15.39■□□□□ 0.05
NUCKS1-201ENST00000367142 RAB26Q9ULW5 256 aa15.39■□□□□ 0.05
NUCKS1-201ENST00000367142 A0A0G2JLL6 359 aaPredicted RBP15.39■□□□□ 0.05
NUCKS1-201ENST00000367142 GPR25O00155 361 aa15.39■□□□□ 0.05
NUCKS1-201ENST00000367142 SAP18O00422 153 aaKnown RBP15.39■□□□□ 0.05
NUCKS1-201ENST00000367142 DUSP3P51452 185 aaPredicted RBP15.39■□□□□ 0.05
NUCKS1-201ENST00000367142 SLBPQ14493 270 aaKnown RBP eCLIP15.39■□□□□ 0.05
NUCKS1-201ENST00000367142 DECR1Q16698 335 aa15.39■□□□□ 0.05
NUCKS1-201ENST00000367142 PRRT2Q7Z6L0 340 aaPredicted RBP15.39■□□□□ 0.05
NUCKS1-201ENST00000367142 Q8N9G6 341 aaPredicted RBP15.39■□□□□ 0.05
NUCKS1-201ENST00000367142 CMTM7Q96FZ5 175 aa15.39■□□□□ 0.05
NUCKS1-201ENST00000367142 CIB1Q99828 191 aa15.39■□□□□ 0.05
NUCKS1-201ENST00000367142 UNC93B1Q9H1C4 597 aa15.39■□□□□ 0.05
NUCKS1-201ENST00000367142 PEX16Q9Y5Y5 336 aa15.39■□□□□ 0.05
NUCKS1-201ENST00000367142 LRRIQ1Q96JM4 1722 aa15.39■□□□□ 0.05
NUCKS1-201ENST00000367142 MYBPHLA2RUH7 354 aa15.38■□□□□ 0.05
NUCKS1-201ENST00000367142 CBFA2T3O75081 653 aa15.38■□□□□ 0.05
NUCKS1-201ENST00000367142 CHRNA1P02708 482 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms