RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.5□□□□□ -1.85
RNU6-28P-201ENST00000362378 SORCS1Q8WY21 1168 aa3.5□□□□□ -1.85
RNU6-28P-201ENST00000362378 ST6GALNAC6Q969X2 333 aa3.5□□□□□ -1.85
RNU6-28P-201ENST00000362378 STAMBPL1Q96FJ0 436 aa3.5□□□□□ -1.85
RNU6-28P-201ENST00000362378 SCRN2Q96FV2 425 aa3.5□□□□□ -1.85
RNU6-28P-201ENST00000362378 LYZL4Q96KX0 146 aa3.5□□□□□ -1.85
RNU6-28P-201ENST00000362378 DUX5Q96PT3 197 aa3.5□□□□□ -1.85
RNU6-28P-201ENST00000362378 GTPBP2Q9BX10 602 aaKnown RBP3.5□□□□□ -1.85
RNU6-28P-201ENST00000362378 MMADHCQ9H3L0 296 aaPredicted RBP3.5□□□□□ -1.85
RNU6-28P-201ENST00000362378 TMEM206Q9H813 350 aa3.5□□□□□ -1.85
RNU6-28P-201ENST00000362378 Q9H8V8 135 aa3.5□□□□□ -1.85
RNU6-28P-201ENST00000362378 ABCB8Q9NUT2 735 aa3.5□□□□□ -1.85
RNU6-28P-201ENST00000362378 SPHK1Q9NYA1 384 aa3.5□□□□□ -1.85
RNU6-28P-201ENST00000362378 COQ3Q9NZJ6 369 aa3.5□□□□□ -1.85
RNU6-28P-201ENST00000362378 VPS18Q9P253 973 aa3.5□□□□□ -1.85
RNU6-28P-201ENST00000362378 ARMCX3Q9UH62 379 aaPredicted RBP3.5□□□□□ -1.85
RNU6-28P-201ENST00000362378 HEG1Q9ULI3 1381 aa3.5□□□□□ -1.85
RNU6-28P-201ENST00000362378 TRAV24A0A0B4J272 114 aa3.49□□□□□ -1.85
RNU6-28P-201ENST00000362378 CASTOR2A6NHX0 329 aa3.49□□□□□ -1.85
RNU6-28P-201ENST00000362378 YDJCA8MPS7 323 aa3.49□□□□□ -1.85
RNU6-28P-201ENST00000362378 PLOD2O00469 737 aa3.49□□□□□ -1.85
RNU6-28P-201ENST00000362378 ZNF263O14978 683 aa3.49□□□□□ -1.85
RNU6-28P-201ENST00000362378 SELENOFO60613 162 aa3.49□□□□□ -1.85
RNU6-28P-201ENST00000362378 FCGR3BO75015 233 aa3.49□□□□□ -1.85
RNU6-28P-201ENST00000362378 LUC7L3O95232 432 aaKnown RBP3.49□□□□□ -1.85
RNU6-28P-201ENST00000362378 RLN1P04808 185 aa3.49□□□□□ -1.85
RNU6-28P-201ENST00000362378 HSPA8P11142 646 aaKnown RBP3.49□□□□□ -1.85
RNU6-28P-201ENST00000362378 IRF2P14316 349 aa3.49□□□□□ -1.85
RNU6-28P-201ENST00000362378 RPL21P46778 160 aaKnown RBP3.49□□□□□ -1.85
RNU6-28P-201ENST00000362378 HOXA1P49639 335 aaPredicted RBP3.49□□□□□ -1.85
RNU6-28P-201ENST00000362378 THBS3P49746 956 aa3.49□□□□□ -1.85
RNU6-28P-201ENST00000362378 MTCP1P56278 107 aa3.49□□□□□ -1.85
RNU6-28P-201ENST00000362378 NANOS2P60321 138 aaKnown RBP3.49□□□□□ -1.85
RNU6-28P-201ENST00000362378 KEAP1Q14145 624 aa3.49□□□□□ -1.85
RNU6-28P-201ENST00000362378 PTGISQ16647 500 aa3.49□□□□□ -1.85
RNU6-28P-201ENST00000362378 SMU1Q2TAY7 513 aa3.49□□□□□ -1.85
RNU6-28P-201ENST00000362378 LBHQ53QV2 105 aaPredicted RBP3.49□□□□□ -1.85
RNU6-28P-201ENST00000362378 LRRC73Q5JTD7 316 aa3.49□□□□□ -1.85
RNU6-28P-201ENST00000362378 SPDYCQ5MJ68 293 aa3.49□□□□□ -1.85
RNU6-28P-201ENST00000362378 CYP4A22Q5TCH4 519 aa3.49□□□□□ -1.85
RNU6-28P-201ENST00000362378 C9orf57Q5W0N0 161 aa3.49□□□□□ -1.85
RNU6-28P-201ENST00000362378 NRARPQ7Z6K4 114 aa3.49□□□□□ -1.85
RNU6-28P-201ENST00000362378 TUSC5Q8IXB3 177 aa3.49□□□□□ -1.85
RNU6-28P-201ENST00000362378 SYCP3Q8IZU3 236 aa3.49□□□□□ -1.85
RNU6-28P-201ENST00000362378 RYBPQ8N488 228 aaPredicted RBP3.49□□□□□ -1.85
RNU6-28P-201ENST00000362378 CARNMT1Q8N4J0 409 aa3.49□□□□□ -1.85
RNU6-28P-201ENST00000362378 C10orf53Q8N6V4 93 aa3.49□□□□□ -1.85
RNU6-28P-201ENST00000362378 OR7G3Q8NG95 312 aa3.49□□□□□ -1.85
RNU6-28P-201ENST00000362378 CTCFLQ8NI51 663 aaPredicted RBP3.49□□□□□ -1.85
RNU6-28P-201ENST00000362378 RIT1Q92963 219 aa3.49□□□□□ -1.85
RNU6-28P-201ENST00000362378 EXOC4Q96A65 974 aa3.49□□□□□ -1.85
RNU6-28P-201ENST00000362378 MED30Q96HR3 178 aa3.49□□□□□ -1.85
RNU6-28P-201ENST00000362378 IL17FQ96PD4 163 aa3.49□□□□□ -1.85
RNU6-28P-201ENST00000362378 MYADMQ96S97 322 aa3.49□□□□□ -1.85
RNU6-28P-201ENST00000362378 ZPBPQ9BS86 351 aa3.49□□□□□ -1.85
RNU6-28P-201ENST00000362378 UTP14AQ9BVJ6 771 aaKnown RBP3.49□□□□□ -1.85
RNU6-28P-201ENST00000362378 SLC2A11Q9BYW1 496 aa3.49□□□□□ -1.85
RNU6-28P-201ENST00000362378 ZNF350Q9GZX5 532 aa3.49□□□□□ -1.85
RNU6-28P-201ENST00000362378 MINDY3Q9H8M7 445 aa3.49□□□□□ -1.85
RNU6-28P-201ENST00000362378 EVA1AQ9H8M9 152 aa3.49□□□□□ -1.85
RNU6-28P-201ENST00000362378 PELI2Q9HAT8 420 aa3.49□□□□□ -1.85
RNU6-28P-201ENST00000362378 ZBTB20Q9HC78 741 aaPredicted RBP3.49□□□□□ -1.85
RNU6-28P-201ENST00000362378 TUFT1Q9NNX1 390 aa3.49□□□□□ -1.85
RNU6-28P-201ENST00000362378 IL1RAPL2Q9NP60 686 aa3.49□□□□□ -1.85
RNU6-28P-201ENST00000362378 GSN-AS1Q9NRJ2 163 aa3.49□□□□□ -1.85
RNU6-28P-201ENST00000362378 SLC38A7Q9NVC3 462 aa3.49□□□□□ -1.85
RNU6-28P-201ENST00000362378 TXNDC16Q9P2K2 825 aa3.49□□□□□ -1.85
RNU6-28P-201ENST00000362378 WDR83OSQ9Y284 106 aa3.49□□□□□ -1.85
RNU6-28P-201ENST00000362378 SNX5Q9Y5X3 404 aa3.49□□□□□ -1.85
RNU6-28P-201ENST00000362378 IGLV5-45A0A087WSX0 123 aa3.48□□□□□ -1.85
RNU6-28P-201ENST00000362378 A0A1W2PN81 502 aa3.48□□□□□ -1.85
RNU6-28P-201ENST00000362378 A0A1W2PPW3 197 aa3.48□□□□□ -1.85
RNU6-28P-201ENST00000362378 LRRD1A4D1F6 860 aa3.48□□□□□ -1.85
RNU6-28P-201ENST00000362378 LACTBL1A8MY62 500 aa3.48□□□□□ -1.85
RNU6-28P-201ENST00000362378 PRAC2D3DTV9 90 aa3.48□□□□□ -1.85
RNU6-28P-201ENST00000362378 SLC33A1O00400 549 aaPredicted RBP3.48□□□□□ -1.85
RNU6-28P-201ENST00000362378 NTN1O95631 604 aa3.48□□□□□ -1.85
RNU6-28P-201ENST00000362378 GSRP00390 522 aa3.48□□□□□ -1.85
RNU6-28P-201ENST00000362378 MYL6BP14649 208 aa3.48□□□□□ -1.85
RNU6-28P-201ENST00000362378 PSMB4P28070 264 aa3.48□□□□□ -1.85
RNU6-28P-201ENST00000362378 TNFRSF8P28908 595 aa3.48□□□□□ -1.85
RNU6-28P-201ENST00000362378 CHRNA7P36544 502 aa3.48□□□□□ -1.85
RNU6-28P-201ENST00000362378 MNDAP41218 407 aa3.48□□□□□ -1.85
RNU6-28P-201ENST00000362378 CDX1P47902 265 aaPredicted RBP3.48□□□□□ -1.85
RNU6-28P-201ENST00000362378 NR2C2P49116 596 aa3.48□□□□□ -1.85
RNU6-28P-201ENST00000362378 ZNF132P52740 706 aa3.48□□□□□ -1.85
RNU6-28P-201ENST00000362378 PDX1P52945 283 aa3.48□□□□□ -1.85
RNU6-28P-201ENST00000362378 GSDMDP57764 484 aa3.48□□□□□ -1.85
RNU6-28P-201ENST00000362378 ASIC1P78348 528 aa3.48□□□□□ -1.85
RNU6-28P-201ENST00000362378 ZXDBP98169 803 aa3.48□□□□□ -1.85
RNU6-28P-201ENST00000362378 DMPKQ09013 629 aa3.48□□□□□ -1.85
RNU6-28P-201ENST00000362378 ZNF415Q09FC8 603 aa3.48□□□□□ -1.85
RNU6-28P-201ENST00000362378 C17orf67Q0P5P2 114 aa3.48□□□□□ -1.85
RNU6-28P-201ENST00000362378 ILF3Q12906 894 aaKnown RBP eCLIP3.48□□□□□ -1.85
RNU6-28P-201ENST00000362378 TAZQ16635 292 aa3.48□□□□□ -1.85
RNU6-28P-201ENST00000362378 CTU2Q2VPK5 515 aaKnown RBP3.48□□□□□ -1.85
RNU6-28P-201ENST00000362378 LACTB2Q53H82 288 aaPredicted RBP3.48□□□□□ -1.85
RNU6-28P-201ENST00000362378 SIRPB2Q5JXA9 342 aa3.48□□□□□ -1.85
RNU6-28P-201ENST00000362378 SUSD4Q5VX71 490 aa3.48□□□□□ -1.85
RNU6-28P-201ENST00000362378 NADSYN1Q6IA69 706 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms