RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 TMEM121BQ9BXQ6 578 aaPredicted RBP9.5□□□□□ -0.89
CUX1-203ENST00000360264 RAB39AQ14964 217 aa9.5□□□□□ -0.89
CUX1-203ENST00000360264 PDE12Q6L8Q7 609 aaKnown RBP9.5□□□□□ -0.89
CUX1-203ENST00000360264 SLC6A15Q9H2J7 730 aa9.5□□□□□ -0.89
CUX1-203ENST00000360264 VITQ6UXI7 678 aa9.5□□□□□ -0.89
CUX1-203ENST00000360264 ZC3HC1Q86WB0 502 aaKnown RBP9.5□□□□□ -0.89
CUX1-203ENST00000360264 LPGAT1Q92604 370 aa9.5□□□□□ -0.89
CUX1-203ENST00000360264 ELMO3Q96BJ8 720 aa9.5□□□□□ -0.89
CUX1-203ENST00000360264 FAM237AA0A1B0GTK4 181 aa9.5□□□□□ -0.89
CUX1-203ENST00000360264 NOS1APO75052 506 aaPredicted RBP9.5□□□□□ -0.89
CUX1-203ENST00000360264 CTSOP43234 321 aaPredicted RBP9.5□□□□□ -0.89
CUX1-203ENST00000360264 AP2S1P53680 142 aaPredicted RBP9.5□□□□□ -0.89
CUX1-203ENST00000360264 MVKQ03426 396 aa9.5□□□□□ -0.89
CUX1-203ENST00000360264 C1orf189Q5VU69 101 aa9.5□□□□□ -0.89
CUX1-203ENST00000360264 SH3RF1Q7Z6J0 888 aa9.5□□□□□ -0.89
CUX1-203ENST00000360264 OR6K2Q8NGY2 324 aa9.5□□□□□ -0.89
CUX1-203ENST00000360264 TMCO6Q96DC7 493 aa9.5□□□□□ -0.89
CUX1-203ENST00000360264 SNX27Q96L92 541 aa9.5□□□□□ -0.89
CUX1-203ENST00000360264 TMEM184CQ9NVA4 438 aa9.5□□□□□ -0.89
CUX1-203ENST00000360264 ALG5Q9Y673 324 aa9.5□□□□□ -0.89
CUX1-203ENST00000360264 MAGEA2P43356 314 aa9.49□□□□□ -0.89
CUX1-203ENST00000360264 MRPL49Q13405 166 aaKnown RBP9.49□□□□□ -0.89
CUX1-203ENST00000360264 SLC5A9Q2M3M2 681 aa9.49□□□□□ -0.89
CUX1-203ENST00000360264 NELFAQ9H3P2 528 aa9.49□□□□□ -0.89
CUX1-203ENST00000360264 NPIPA5E9PKD4 350 aa9.49□□□□□ -0.89
CUX1-203ENST00000360264 ENTPD6O75354 484 aa9.49□□□□□ -0.89
CUX1-203ENST00000360264 NFKB2Q00653 900 aa9.49□□□□□ -0.89
CUX1-203ENST00000360264 PERM1Q5SV97 790 aa9.49□□□□□ -0.89
CUX1-203ENST00000360264 C12orf29Q8N999 325 aa9.49□□□□□ -0.89
CUX1-203ENST00000360264 ERVK-5Q9HDB9 667 aa9.49□□□□□ -0.89
CUX1-203ENST00000360264 NPIPA1Q9UND3 350 aa9.49□□□□□ -0.89
CUX1-203ENST00000360264 SOX30O94993 753 aa9.49□□□□□ -0.89
CUX1-203ENST00000360264 IL10RBQ08334 325 aa9.49□□□□□ -0.89
CUX1-203ENST00000360264 CHIT1Q13231 466 aa9.49□□□□□ -0.89
CUX1-203ENST00000360264 ADGRD1Q6QNK2 874 aa9.49□□□□□ -0.89
CUX1-203ENST00000360264 DGLUCYQ7Z3D6 616 aa9.49□□□□□ -0.89
CUX1-203ENST00000360264 ZNF554Q86TJ5 538 aa9.49□□□□□ -0.89
CUX1-203ENST00000360264 OSTF1Q92882 214 aa9.49□□□□□ -0.89
CUX1-203ENST00000360264 MLXQ9UH92 298 aa9.49□□□□□ -0.89
CUX1-203ENST00000360264 CDH22Q9UJ99 828 aa9.49□□□□□ -0.89
CUX1-203ENST00000360264 NADKO95544 446 aaPredicted RBP9.49□□□□□ -0.89
CUX1-203ENST00000360264 XYLT1Q86Y38 959 aa9.49□□□□□ -0.89
CUX1-203ENST00000360264 CFAP52Q8N1V2 620 aa9.49□□□□□ -0.89
CUX1-203ENST00000360264 NAT14Q8WUY8 206 aa9.49□□□□□ -0.89
CUX1-203ENST00000360264 NKD1Q969G9 470 aa9.49□□□□□ -0.89
CUX1-203ENST00000360264 INPP4AQ96PE3 977 aaPredicted RBP9.49□□□□□ -0.89
CUX1-203ENST00000360264 YTHDF1Q9BYJ9 559 aaKnown RBP9.49□□□□□ -0.89
CUX1-203ENST00000360264 CIDEBQ9UHD4 219 aa9.49□□□□□ -0.89
CUX1-203ENST00000360264 R3HDM2Q9Y2K5 976 aaKnown RBP9.49□□□□□ -0.89
CUX1-203ENST00000360264 OR2AT4A6NND4 320 aa9.49□□□□□ -0.89
CUX1-203ENST00000360264 ZMPSTE24O75844 475 aa9.49□□□□□ -0.89
CUX1-203ENST00000360264 CLPXO76031 633 aa9.49□□□□□ -0.89
CUX1-203ENST00000360264 SRCP12931 536 aa9.49□□□□□ -0.89
CUX1-203ENST00000360264 GPR107Q5VW38 600 aa9.49□□□□□ -0.89
CUX1-203ENST00000360264 OR2L8Q8NGY9 312 aa9.49□□□□□ -0.89
CUX1-203ENST00000360264 ADAM7Q9H2U9 754 aa9.49□□□□□ -0.89
CUX1-203ENST00000360264 GOT2P00505 430 aaKnown RBP9.49□□□□□ -0.89
CUX1-203ENST00000360264 IFNA21P01568 189 aa9.49□□□□□ -0.89
CUX1-203ENST00000360264 GP1BBP13224 206 aa9.49□□□□□ -0.89
CUX1-203ENST00000360264 ZNF30P17039 623 aa9.49□□□□□ -0.89
CUX1-203ENST00000360264 CEBPGP53567 150 aa9.49□□□□□ -0.89
CUX1-203ENST00000360264 ARHGAP40Q5TG30 622 aa9.49□□□□□ -0.89
CUX1-203ENST00000360264 SLC22A15Q8IZD6 547 aa9.49□□□□□ -0.89
CUX1-203ENST00000360264 ARHGEF4Q9NR80 690 aa9.49□□□□□ -0.89
CUX1-203ENST00000360264 SIRPGQ9P1W8 387 aa9.49□□□□□ -0.89
CUX1-203ENST00000360264 PIKFYVEQ9Y2I7 2098 aa9.49□□□□□ -0.89
CUX1-203ENST00000360264 HEATR5BQ9P2D3 2071 aa9.49□□□□□ -0.89
CUX1-203ENST00000360264 SMIM28A0A1B0GU29 152 aa9.49□□□□□ -0.89
CUX1-203ENST00000360264 M0R129 80 aa9.49□□□□□ -0.89
CUX1-203ENST00000360264 CLDN5O00501 218 aa9.49□□□□□ -0.89
CUX1-203ENST00000360264 CILPO75339 1184 aa9.49□□□□□ -0.89
CUX1-203ENST00000360264 ERCC1P07992 297 aaPredicted RBP9.49□□□□□ -0.89
CUX1-203ENST00000360264 S100A2P29034 98 aa9.49□□□□□ -0.89
CUX1-203ENST00000360264 GNA12Q03113 381 aa9.49□□□□□ -0.89
CUX1-203ENST00000360264 PRAMEF17Q5VTA0 474 aa9.49□□□□□ -0.89
CUX1-203ENST00000360264 KAT8Q9H7Z6 458 aaKnown RBP9.49□□□□□ -0.89
CUX1-203ENST00000360264 PCDHGA10Q9Y5H3 936 aa9.49□□□□□ -0.89
CUX1-203ENST00000360264 MAU2Q9Y6X3 613 aa9.49□□□□□ -0.89
CUX1-203ENST00000360264 COL5A2P05997 1499 aaPredicted RBP9.49□□□□□ -0.89
CUX1-203ENST00000360264 ERCC6L2Q5T890 1561 aa9.49□□□□□ -0.89
CUX1-203ENST00000360264 H1F0P07305 194 aaKnown RBP9.49□□□□□ -0.89
CUX1-203ENST00000360264 HSD3B2P26439 372 aa9.49□□□□□ -0.89
CUX1-203ENST00000360264 GRK5P34947 590 aa9.49□□□□□ -0.89
CUX1-203ENST00000360264 SCNN1AP37088 669 aa9.49□□□□□ -0.89
CUX1-203ENST00000360264 EZH1Q92800 747 aaPredicted RBP9.49□□□□□ -0.89
CUX1-203ENST00000360264 RETREG1Q9H6L5 497 aa9.49□□□□□ -0.89
CUX1-203ENST00000360264 CDH10Q9Y6N8 788 aa9.49□□□□□ -0.89
CUX1-203ENST00000360264 ATP6AP2A0A1C7CYW4 349 aa9.49□□□□□ -0.89
CUX1-203ENST00000360264 ICAM3P32942 547 aa9.49□□□□□ -0.89
CUX1-203ENST00000360264 ARRB1P49407 418 aaPredicted RBP9.49□□□□□ -0.89
CUX1-203ENST00000360264 SMSP52788 366 aa9.49□□□□□ -0.89
CUX1-203ENST00000360264 CARD16Q5EG05 197 aa9.49□□□□□ -0.89
CUX1-203ENST00000360264 PROKR2Q8NFJ6 384 aa9.49□□□□□ -0.89
CUX1-203ENST00000360264 OR10A6Q8NH74 314 aa9.49□□□□□ -0.89
CUX1-203ENST00000360264 CLCNKBP51801 687 aa9.49□□□□□ -0.89
CUX1-203ENST00000360264 CD47Q08722 323 aa9.49□□□□□ -0.89
CUX1-203ENST00000360264 LINGO2Q7L985 606 aa9.49□□□□□ -0.89
CUX1-203ENST00000360264 HAS1Q92839 578 aa9.49□□□□□ -0.89
CUX1-203ENST00000360264 DNAJC19Q96DA6 116 aa9.49□□□□□ -0.89
CUX1-203ENST00000360264 BORCS8Q96FH0 119 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms