RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 RHDQ02161 417 aa11.5□□□□□ -0.57
COL9A1-202ENST00000357250 ABHD18Q0P651 414 aa11.5□□□□□ -0.57
COL9A1-202ENST00000357250 ZBED5Q49AG3 693 aa11.5□□□□□ -0.57
COL9A1-202ENST00000357250 GEMIN6Q8WXD5 167 aaKnown RBP11.5□□□□□ -0.57
COL9A1-202ENST00000357250 EMID1Q96A84 441 aaPredicted RBP11.5□□□□□ -0.57
COL9A1-202ENST00000357250 TSGA13Q96PP4 275 aa11.5□□□□□ -0.57
COL9A1-202ENST00000357250 TAPBPLQ9BX59 468 aa11.5□□□□□ -0.57
COL9A1-202ENST00000357250 POLR2J3Q9H1A7 115 aaKnown RBP11.5□□□□□ -0.57
COL9A1-202ENST00000357250 TPK1Q9H3S4 243 aa11.5□□□□□ -0.57
COL9A1-202ENST00000357250 AKTIPQ9H8T0 292 aa11.5□□□□□ -0.57
COL9A1-202ENST00000357250 FARSBQ9NSD9 589 aaKnown RBP11.5□□□□□ -0.57
COL9A1-202ENST00000357250 FAM120CQ9NX05 1096 aaKnown RBP11.5□□□□□ -0.57
COL9A1-202ENST00000357250 POFUT2Q9Y2G5 429 aa11.5□□□□□ -0.57
COL9A1-202ENST00000357250 HAS3O00219 553 aa11.5□□□□□ -0.57
COL9A1-202ENST00000357250 DLX3O60479 287 aa11.5□□□□□ -0.57
COL9A1-202ENST00000357250 TBX10O75333 385 aa11.5□□□□□ -0.57
COL9A1-202ENST00000357250 TFPIP10646 304 aa11.5□□□□□ -0.57
COL9A1-202ENST00000357250 CSNK2A2P19784 350 aaPredicted RBP11.5□□□□□ -0.57
COL9A1-202ENST00000357250 CLCN2P51788 898 aa11.5□□□□□ -0.57
COL9A1-202ENST00000357250 SLC10A7Q0GE19 358 aa11.5□□□□□ -0.57
COL9A1-202ENST00000357250 SIRPB2Q5JXA9 342 aa11.5□□□□□ -0.57
COL9A1-202ENST00000357250 FAAH2Q6GMR7 532 aa11.5□□□□□ -0.57
COL9A1-202ENST00000357250 GDPD4Q6W3E5 623 aa11.5□□□□□ -0.57
COL9A1-202ENST00000357250 TAS1R3Q7RTX0 852 aa11.5□□□□□ -0.57
COL9A1-202ENST00000357250 CIR1Q86X95 450 aaPredicted RBP11.5□□□□□ -0.57
COL9A1-202ENST00000357250 OR2AP1Q8NGE2 309 aa11.5□□□□□ -0.57
COL9A1-202ENST00000357250 SCAMP5Q8TAC9 235 aa11.5□□□□□ -0.57
COL9A1-202ENST00000357250 KIAA1191Q96A73 305 aa11.5□□□□□ -0.57
COL9A1-202ENST00000357250 EFHD2Q96C19 240 aaPredicted RBP11.5□□□□□ -0.57
COL9A1-202ENST00000357250 ZNF570Q96NI8 536 aa11.5□□□□□ -0.57
COL9A1-202ENST00000357250 MKS1Q9NXB0 559 aa11.5□□□□□ -0.57
COL9A1-202ENST00000357250 GIN1Q9NXP7 522 aa11.5□□□□□ -0.57
COL9A1-202ENST00000357250 ARL5AQ9Y689 179 aa11.5□□□□□ -0.57
COL9A1-202ENST00000357250 URB1O60287 2271 aaKnown RBP11.5□□□□□ -0.57
COL9A1-202ENST00000357250 A0A1W2PP18 115 aa11.5□□□□□ -0.57
COL9A1-202ENST00000357250 BHMG1C9JSJ3 638 aaPredicted RBP11.5□□□□□ -0.57
COL9A1-202ENST00000357250 E7ENX8 843 aa11.5□□□□□ -0.57
COL9A1-202ENST00000357250 PCCBP05166 539 aa11.5□□□□□ -0.57
COL9A1-202ENST00000357250 ALPPP05187 535 aa11.5□□□□□ -0.57
COL9A1-202ENST00000357250 GSTT2BP0CG30 244 aa11.5□□□□□ -0.57
COL9A1-202ENST00000357250 NR4A1P22736 598 aa11.5□□□□□ -0.57
COL9A1-202ENST00000357250 ATP5A1P25705 553 aaKnown RBP11.5□□□□□ -0.57
COL9A1-202ENST00000357250 GRK6P43250 576 aa11.5□□□□□ -0.57
COL9A1-202ENST00000357250 PLA2G4EQ3MJ16 856 aa11.5□□□□□ -0.57
COL9A1-202ENST00000357250 DCBLD1Q8N8Z6 715 aa11.5□□□□□ -0.57
COL9A1-202ENST00000357250 OR13C4Q8NGS5 318 aa11.5□□□□□ -0.57
COL9A1-202ENST00000357250 HERVK_113Q902F9 699 aa11.5□□□□□ -0.57
COL9A1-202ENST00000357250 HPS1Q92902 700 aa11.5□□□□□ -0.57
COL9A1-202ENST00000357250 CYP2S1Q96SQ9 504 aa11.5□□□□□ -0.57
COL9A1-202ENST00000357250 WRAP53Q9BUR4 548 aaKnown RBP11.5□□□□□ -0.57
COL9A1-202ENST00000357250 COMMD4Q9H0A8 199 aa11.5□□□□□ -0.57
COL9A1-202ENST00000357250 EBF2Q9HAK2 575 aa11.5□□□□□ -0.57
COL9A1-202ENST00000357250 C4BP0C0L5 1744 aa11.5□□□□□ -0.57
COL9A1-202ENST00000357250 MYH6P13533 1939 aa11.5□□□□□ -0.57
COL9A1-202ENST00000357250 ARPC2O15144 300 aa11.5□□□□□ -0.57
COL9A1-202ENST00000357250 TLX3O43711 291 aaPredicted RBP11.5□□□□□ -0.57
COL9A1-202ENST00000357250 AKT2P31751 481 aa11.5□□□□□ -0.57
COL9A1-202ENST00000357250 CSKP41240 450 aa11.5□□□□□ -0.57
COL9A1-202ENST00000357250 RIPPLY1Q0D2K3 151 aa11.5□□□□□ -0.57
COL9A1-202ENST00000357250 KCNC3Q14003 757 aa11.5□□□□□ -0.57
COL9A1-202ENST00000357250 E2F2Q14209 437 aa11.5□□□□□ -0.57
COL9A1-202ENST00000357250 SUZ12Q15022 739 aaKnown RBP11.5□□□□□ -0.57
COL9A1-202ENST00000357250 TP53INP1Q96A56 240 aa11.5□□□□□ -0.57
COL9A1-202ENST00000357250 CCDC59Q9P031 241 aaKnown RBP11.5□□□□□ -0.57
COL9A1-202ENST00000357250 YIPF1Q9Y548 306 aa11.5□□□□□ -0.57
COL9A1-202ENST00000357250 KNL1Q8NG31 2342 aa11.49□□□□□ -0.57
COL9A1-202ENST00000357250 EI24O14681 340 aa11.49□□□□□ -0.57
COL9A1-202ENST00000357250 NRP1O14786 923 aa11.49□□□□□ -0.57
COL9A1-202ENST00000357250 UGT1A9O60656 530 aa11.49□□□□□ -0.57
COL9A1-202ENST00000357250 AOC2O75106 756 aa11.49□□□□□ -0.57
COL9A1-202ENST00000357250 RB1P06400 928 aa11.49□□□□□ -0.57
COL9A1-202ENST00000357250 EBLN1P0CF75 366 aa11.49□□□□□ -0.57
COL9A1-202ENST00000357250 CPN2P22792 545 aa11.49□□□□□ -0.57
COL9A1-202ENST00000357250 MTPNP58546 118 aa11.49□□□□□ -0.57
COL9A1-202ENST00000357250 ANKRD46Q86W74 232 aa11.49□□□□□ -0.57
COL9A1-202ENST00000357250 OR10G2Q8NGC3 310 aa11.49□□□□□ -0.57
COL9A1-202ENST00000357250 CMTM7Q96FZ5 175 aa11.49□□□□□ -0.57
COL9A1-202ENST00000357250 SIGLEC10Q96LC7 697 aa11.49□□□□□ -0.57
COL9A1-202ENST00000357250 MAPKAP1Q9BPZ7 522 aa11.49□□□□□ -0.57
COL9A1-202ENST00000357250 UGT1A7Q9HAW7 530 aa11.49□□□□□ -0.57
COL9A1-202ENST00000357250 UGT1A10Q9HAW8 530 aa11.49□□□□□ -0.57
COL9A1-202ENST00000357250 UGT1A8Q9HAW9 530 aa11.49□□□□□ -0.57
COL9A1-202ENST00000357250 ZBTB26Q9HCK0 441 aa11.49□□□□□ -0.57
COL9A1-202ENST00000357250 TMEM248Q9NWD8 314 aa11.49□□□□□ -0.57
COL9A1-202ENST00000357250 TCRBV7S3A2A0A539 114 aa11.49□□□□□ -0.57
COL9A1-202ENST00000357250 hCG_2039718K7EN88 272 aa11.49□□□□□ -0.57
COL9A1-202ENST00000357250 CLIC1O00299 241 aa11.49□□□□□ -0.57
COL9A1-202ENST00000357250 HCN1O60741 890 aa11.49□□□□□ -0.57
COL9A1-202ENST00000357250 NCK1P16333 377 aa11.49□□□□□ -0.57
COL9A1-202ENST00000357250 IL7RP16871 459 aa11.49□□□□□ -0.57
COL9A1-202ENST00000357250 SLC6A4P31645 630 aa11.49□□□□□ -0.57
COL9A1-202ENST00000357250 CBX5P45973 191 aa11.49□□□□□ -0.57
COL9A1-202ENST00000357250 C1QTNF8P60827 252 aa11.49□□□□□ -0.57
COL9A1-202ENST00000357250 IRF9Q00978 393 aa11.49□□□□□ -0.57
COL9A1-202ENST00000357250 HSPB3Q12988 150 aa11.49□□□□□ -0.57
COL9A1-202ENST00000357250 TUBA3CQ13748 450 aa11.49□□□□□ -0.57
COL9A1-202ENST00000357250 SCARB2Q14108 478 aa11.49□□□□□ -0.57
COL9A1-202ENST00000357250 PDCD4Q53EL6 469 aaKnown RBP11.49□□□□□ -0.57
COL9A1-202ENST00000357250 ZNF783Q6ZMS7 281 aa11.49□□□□□ -0.57
COL9A1-202ENST00000357250 GET4Q7L5D6 327 aaPredicted RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms