RNA–Protein interactions for RNA: ENST00000354828.7

GABPA-201, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 5,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-201ENST00000354828 NECTIN3Q9NQS3 549 aa9.49□□□□□ -0.89
GABPA-201ENST00000354828 KLHL1Q9NR64 748 aa9.49□□□□□ -0.89
GABPA-201ENST00000354828 SLC17A6Q9P2U8 582 aa9.49□□□□□ -0.89
GABPA-201ENST00000354828 CFL2Q9Y281 166 aa9.49□□□□□ -0.89
GABPA-201ENST00000354828 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.49□□□□□ -0.89
GABPA-201ENST00000354828 CHRM1P11229 460 aaPredicted RBP9.49□□□□□ -0.89
GABPA-201ENST00000354828 CASP6P55212 293 aa9.49□□□□□ -0.89
GABPA-201ENST00000354828 DEFB133Q30KQ1 61 aa9.49□□□□□ -0.89
GABPA-201ENST00000354828 ADGRD1Q6QNK2 874 aa9.49□□□□□ -0.89
GABPA-201ENST00000354828 SLC5A11Q8WWX8 675 aa9.49□□□□□ -0.89
GABPA-201ENST00000354828 SLC35G5Q96KT7 338 aa9.49□□□□□ -0.89
GABPA-201ENST00000354828 SORCS3Q9UPU3 1222 aa9.49□□□□□ -0.89
GABPA-201ENST00000354828 PEX1O43933 1283 aa9.49□□□□□ -0.89
GABPA-201ENST00000354828 ECI2O75521 394 aa9.49□□□□□ -0.89
GABPA-201ENST00000354828 UGT2B17O75795 530 aa9.49□□□□□ -0.89
GABPA-201ENST00000354828 OR2B3O76000 313 aa9.49□□□□□ -0.89
GABPA-201ENST00000354828 ATF6P18850 670 aa9.49□□□□□ -0.89
GABPA-201ENST00000354828 STC1P52823 247 aa9.49□□□□□ -0.89
GABPA-201ENST00000354828 UBAP2LQ14157 1087 aaKnown RBP9.49□□□□□ -0.89
GABPA-201ENST00000354828 ZBTB6Q15916 424 aa9.49□□□□□ -0.89
GABPA-201ENST00000354828 TMIGD1Q6UXZ0 262 aa9.49□□□□□ -0.89
GABPA-201ENST00000354828 CPSF7Q8N684 471 aaKnown RBP9.49□□□□□ -0.89
GABPA-201ENST00000354828 OR4K17Q8NGC6 315 aa9.49□□□□□ -0.89
GABPA-201ENST00000354828 RP9Q8TA86 221 aaKnown RBP9.49□□□□□ -0.89
GABPA-201ENST00000354828 THAP11Q96EK4 314 aa9.49□□□□□ -0.89
GABPA-201ENST00000354828 CDK15Q96Q40 435 aa9.49□□□□□ -0.89
GABPA-201ENST00000354828 SLITRK2Q9H156 845 aa9.49□□□□□ -0.89
GABPA-201ENST00000354828 FANCFQ9NPI8 374 aa9.49□□□□□ -0.89
GABPA-201ENST00000354828 CALML5Q9NZT1 146 aa9.49□□□□□ -0.89
GABPA-201ENST00000354828 IFT80Q9P2H3 777 aaPredicted RBP9.49□□□□□ -0.89
GABPA-201ENST00000354828 TCRBV7S3A2A0A539 114 aa9.49□□□□□ -0.89
GABPA-201ENST00000354828 WASH3PC4AMC7 463 aa9.49□□□□□ -0.89
GABPA-201ENST00000354828 FKBP6O75344 327 aa9.49□□□□□ -0.89
GABPA-201ENST00000354828 IL7RP16871 459 aa9.49□□□□□ -0.89
GABPA-201ENST00000354828 VHLP40337 213 aa9.49□□□□□ -0.89
GABPA-201ENST00000354828 C1orf220Q5T0J3 134 aa9.49□□□□□ -0.89
GABPA-201ENST00000354828 LRRC70Q7Z2Q7 622 aa9.49□□□□□ -0.89
GABPA-201ENST00000354828 ZNF761Q86XN6 746 aaPredicted RBP9.49□□□□□ -0.89
GABPA-201ENST00000354828 RCN3Q96D15 328 aa9.49□□□□□ -0.89
GABPA-201ENST00000354828 OR8D2Q9GZM6 311 aa9.49□□□□□ -0.89
GABPA-201ENST00000354828 RNF38Q9H0F5 515 aa9.49□□□□□ -0.89
GABPA-201ENST00000354828 ELL3Q9HB65 397 aaPredicted RBP9.49□□□□□ -0.89
GABPA-201ENST00000354828 SLCO1B3Q9NPD5 702 aa9.49□□□□□ -0.89
GABPA-201ENST00000354828 ADGRE2Q9UHX3 823 aa9.49□□□□□ -0.89
GABPA-201ENST00000354828 MYH7P12883 1935 aa9.48□□□□□ -0.89
GABPA-201ENST00000354828 H7BY64 318 aa9.48□□□□□ -0.89
GABPA-201ENST00000354828 MYL12BO14950 172 aa9.48□□□□□ -0.89
GABPA-201ENST00000354828 RGS5O15539 181 aa9.48□□□□□ -0.89
GABPA-201ENST00000354828 KERAO60938 352 aa9.48□□□□□ -0.89
GABPA-201ENST00000354828 PTX3P26022 381 aaPredicted RBP9.48□□□□□ -0.89
GABPA-201ENST00000354828 SLC25A3Q00325 362 aa9.48□□□□□ -0.89
GABPA-201ENST00000354828 DSC1Q08554 894 aa9.48□□□□□ -0.89
GABPA-201ENST00000354828 ASTE1Q2TB18 679 aaPredicted RBP9.48□□□□□ -0.89
GABPA-201ENST00000354828 PTCHD3Q3KNS1 767 aa9.48□□□□□ -0.89
GABPA-201ENST00000354828 KLHL12Q53G59 568 aa9.48□□□□□ -0.89
GABPA-201ENST00000354828 PM20D1Q6GTS8 502 aa9.48□□□□□ -0.89
GABPA-201ENST00000354828 FAM92BQ6ZTR7 304 aa9.48□□□□□ -0.89
GABPA-201ENST00000354828 ZC3H3Q8IXZ2 948 aaKnown RBP9.48□□□□□ -0.89
GABPA-201ENST00000354828 MREGQ8N565 214 aa9.48□□□□□ -0.89
GABPA-201ENST00000354828 OR2T12Q8NG77 320 aa9.48□□□□□ -0.89
GABPA-201ENST00000354828 NAT14Q8WUY8 206 aa9.48□□□□□ -0.89
GABPA-201ENST00000354828 PRAP1Q96NZ9 151 aa9.48□□□□□ -0.89
GABPA-201ENST00000354828 ZC4H2Q9NQZ6 224 aa9.48□□□□□ -0.89
GABPA-201ENST00000354828 AKAP11Q9UKA4 1901 aa9.48□□□□□ -0.89
GABPA-201ENST00000354828 APOA1P02647 267 aa9.48□□□□□ -0.89
GABPA-201ENST00000354828 EDN1P05305 212 aa9.48□□□□□ -0.89
GABPA-201ENST00000354828 KLK1P06870 262 aa9.48□□□□□ -0.89
GABPA-201ENST00000354828 ATP6V1B1P15313 513 aa9.48□□□□□ -0.89
GABPA-201ENST00000354828 CDC42P60953 191 aa9.48□□□□□ -0.89
GABPA-201ENST00000354828 LGALS3BPQ08380 585 aa9.48□□□□□ -0.89
GABPA-201ENST00000354828 EGFLAMQ63HQ2 1017 aa9.48□□□□□ -0.89
GABPA-201ENST00000354828 ZNF730Q6ZMV8 503 aa9.48□□□□□ -0.89
GABPA-201ENST00000354828 BHLHE22Q8NFJ8 381 aaPredicted RBP9.48□□□□□ -0.89
GABPA-201ENST00000354828 OR6Y1Q8NGX8 325 aa9.48□□□□□ -0.89
GABPA-201ENST00000354828 TEX47Q8TBZ9 253 aa9.48□□□□□ -0.89
GABPA-201ENST00000354828 KLHL6Q8WZ60 621 aa9.48□□□□□ -0.89
GABPA-201ENST00000354828 EDAQ92838 391 aa9.48□□□□□ -0.89
GABPA-201ENST00000354828 IMP4Q96G21 291 aaKnown RBP9.48□□□□□ -0.89
GABPA-201ENST00000354828 RBCK1Q9BYM8 510 aa9.48□□□□□ -0.89
GABPA-201ENST00000354828 MVB12BQ9H7P6 319 aa9.48□□□□□ -0.89
GABPA-201ENST00000354828 METTL7AQ9H8H3 244 aa9.48□□□□□ -0.89
GABPA-201ENST00000354828 KCND1Q9NSA2 647 aa9.48□□□□□ -0.89
GABPA-201ENST00000354828 ZCCHC3Q9NUD5 404 aaKnown RBP9.48□□□□□ -0.89
GABPA-201ENST00000354828 MARCH5Q9NX47 278 aa9.48□□□□□ -0.89
GABPA-201ENST00000354828 HSFX1Q9UBD0 423 aa9.48□□□□□ -0.89
GABPA-201ENST00000354828 VPS29Q9UBQ0 182 aa9.48□□□□□ -0.89
GABPA-201ENST00000354828 PHF11Q9UIL8 331 aa9.48□□□□□ -0.89
GABPA-201ENST00000354828 LATO43561 262 aa9.48□□□□□ -0.89
GABPA-201ENST00000354828 FHP07954 510 aa9.48□□□□□ -0.89
GABPA-201ENST00000354828 CDH1P12830 882 aa9.48□□□□□ -0.89
GABPA-201ENST00000354828 PTGIRP43119 386 aa9.48□□□□□ -0.89
GABPA-201ENST00000354828 CLDN2P57739 230 aa9.48□□□□□ -0.89
GABPA-201ENST00000354828 RPS14P62263 151 aaKnown RBP9.48□□□□□ -0.89
GABPA-201ENST00000354828 MYBPC1Q00872 1141 aa9.48□□□□□ -0.89
GABPA-201ENST00000354828 SMAD4Q13485 552 aaKnown RBP9.48□□□□□ -0.89
GABPA-201ENST00000354828 FAM91A1Q658Y4 838 aa9.48□□□□□ -0.89
GABPA-201ENST00000354828 SETD9Q8NE22 299 aa9.48□□□□□ -0.89
GABPA-201ENST00000354828 C12orf65Q9H3J6 166 aaKnown RBP9.48□□□□□ -0.89
GABPA-201ENST00000354828 FBRSL1Q9HCM7 1045 aaKnown RBP9.48□□□□□ -0.89
GABPA-201ENST00000354828 SH3GLB1Q9Y371 365 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms