RNA–Protein interactions for RNA: ENST00000354421.7

C11orf54-202, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 1,733 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-202ENST00000354421 RABGGTBP53611 331 aa7.35□□□□□ -1.23
C11orf54-202ENST00000354421 TPTEP56180 551 aa7.35□□□□□ -1.23
C11orf54-202ENST00000354421 SHC2P98077 582 aa7.35□□□□□ -1.23
C11orf54-202ENST00000354421 MVKQ03426 396 aa7.35□□□□□ -1.23
C11orf54-202ENST00000354421 SIGLEC14Q08ET2 396 aa7.35□□□□□ -1.23
C11orf54-202ENST00000354421 SELPLGQ14242 412 aa7.35□□□□□ -1.23
C11orf54-202ENST00000354421 SF3B4Q15427 424 aaKnown RBP eCLIP7.35□□□□□ -1.233e-6■■■□□ 15.4
C11orf54-202ENST00000354421 PCSK7Q16549 785 aa7.35□□□□□ -1.23
C11orf54-202ENST00000354421 NKG7Q16617 165 aa7.35□□□□□ -1.23
C11orf54-202ENST00000354421 ZNF181Q2M3W8 571 aa7.35□□□□□ -1.23
C11orf54-202ENST00000354421 C6orf136Q5SQH8 315 aa7.35□□□□□ -1.23
C11orf54-202ENST00000354421 UBXN11Q5T124 520 aa7.35□□□□□ -1.23
C11orf54-202ENST00000354421 ATAD3BQ5T9A4 648 aa7.35□□□□□ -1.23
C11orf54-202ENST00000354421 UGT3A1Q6NUS8 523 aa7.35□□□□□ -1.23
C11orf54-202ENST00000354421 TAPT1Q6NXT6 567 aa7.35□□□□□ -1.23
C11orf54-202ENST00000354421 LDB1Q86U70 411 aaPredicted RBP7.35□□□□□ -1.23
C11orf54-202ENST00000354421 AKAP14Q86UN6 197 aa7.35□□□□□ -1.23
C11orf54-202ENST00000354421 P2RY8Q86VZ1 359 aa7.35□□□□□ -1.23
C11orf54-202ENST00000354421 MMAAQ8IVH4 418 aaKnown RBP7.35□□□□□ -1.23
C11orf54-202ENST00000354421 RTL3Q8N8U3 475 aaKnown RBP7.35□□□□□ -1.23
C11orf54-202ENST00000354421 SETD9Q8NE22 299 aa7.35□□□□□ -1.23
C11orf54-202ENST00000354421 OR6P1Q8NGX9 317 aa7.35□□□□□ -1.23
C11orf54-202ENST00000354421 OR2T11Q8NH01 316 aa7.35□□□□□ -1.23
C11orf54-202ENST00000354421 STAG3L4Q8TBR4 150 aa7.35□□□□□ -1.23
C11orf54-202ENST00000354421 PROKR1Q8TCW9 393 aa7.35□□□□□ -1.23
C11orf54-202ENST00000354421 MCOLN3Q8TDD5 553 aa7.35□□□□□ -1.23
C11orf54-202ENST00000354421 EDEM1Q92611 657 aa7.35□□□□□ -1.23
C11orf54-202ENST00000354421 TBC1D20Q96BZ9 403 aa7.35□□□□□ -1.23
C11orf54-202ENST00000354421 PABPC5Q96DU9 382 aaKnown RBP7.35□□□□□ -1.23
C11orf54-202ENST00000354421 SLC47A1Q96FL8 570 aa7.35□□□□□ -1.23
C11orf54-202ENST00000354421 ALOXE3Q9BYJ1 711 aa7.35□□□□□ -1.23
C11orf54-202ENST00000354421 SLIRPQ9GZT3 109 aaKnown RBP7.35□□□□□ -1.23
C11orf54-202ENST00000354421 DSN1Q9H410 356 aa7.35□□□□□ -1.23
C11orf54-202ENST00000354421 SIAEQ9HAT2 523 aa7.35□□□□□ -1.23
C11orf54-202ENST00000354421 SYTL2Q9HCH5 934 aa7.35□□□□□ -1.23
C11orf54-202ENST00000354421 CSNK1G1Q9HCP0 422 aa7.35□□□□□ -1.23
C11orf54-202ENST00000354421 RNF19AQ9NV58 838 aa7.35□□□□□ -1.23
C11orf54-202ENST00000354421 TMEM30AQ9NV96 361 aa7.35□□□□□ -1.23
C11orf54-202ENST00000354421 KLK14Q9P0G3 267 aa7.35□□□□□ -1.23
C11orf54-202ENST00000354421 ERVK-18Q9QC07 812 aa7.35□□□□□ -1.23
C11orf54-202ENST00000354421 VPS51Q9UID3 782 aa7.35□□□□□ -1.23
C11orf54-202ENST00000354421 TMEFF2Q9UIK5 374 aaPredicted RBP7.35□□□□□ -1.23
C11orf54-202ENST00000354421 OSGIN1Q9UJX0 560 aa7.35□□□□□ -1.23
C11orf54-202ENST00000354421 CDH9Q9ULB4 789 aa7.35□□□□□ -1.23
C11orf54-202ENST00000354421 ERVW-1Q9UQF0 538 aa7.35□□□□□ -1.23
C11orf54-202ENST00000354421 TPRKBQ9Y3C4 175 aa7.35□□□□□ -1.23
C11orf54-202ENST00000354421 TIMM22Q9Y584 194 aa7.35□□□□□ -1.23
C11orf54-202ENST00000354421 A3GALT2U3KPV4 340 aa7.35□□□□□ -1.23
C11orf54-202ENST00000354421 MN1Q10571 1320 aaPredicted RBP7.35□□□□□ -1.23
C11orf54-202ENST00000354421 NUP205Q92621 2012 aa7.35□□□□□ -1.23
C11orf54-202ENST00000354421 NYNRINQ9P2P1 1898 aaKnown RBP7.35□□□□□ -1.23
C11orf54-202ENST00000354421 LOC285095A0A1B0GVY8 99 aa7.35□□□□□ -1.23
C11orf54-202ENST00000354421 PABPN1LA6NDY0 278 aaKnown RBP7.35□□□□□ -1.23
C11orf54-202ENST00000354421 RRN3P2A6NIE6 340 aa7.35□□□□□ -1.23
C11orf54-202ENST00000354421 SYCE1LA8MT33 242 aa7.35□□□□□ -1.23
C11orf54-202ENST00000354421 PRMT5O14744 637 aaPredicted RBP7.35□□□□□ -1.23
C11orf54-202ENST00000354421 BCKDKO14874 412 aa7.35□□□□□ -1.23
C11orf54-202ENST00000354421 GSTA4O15217 222 aa7.35□□□□□ -1.23
C11orf54-202ENST00000354421 IRAK2O43187 625 aa7.35□□□□□ -1.23
C11orf54-202ENST00000354421 LDB2O43679 373 aa7.35□□□□□ -1.23
C11orf54-202ENST00000354421 ECI2O75521 394 aa7.35□□□□□ -1.23
C11orf54-202ENST00000354421 RFPL2O75678 378 aa7.35□□□□□ -1.23
C11orf54-202ENST00000354421 SEC24AO95486 1093 aa7.35□□□□□ -1.23
C11orf54-202ENST00000354421 GLP2RO95838 553 aa7.35□□□□□ -1.23
C11orf54-202ENST00000354421 CYP11A1P05108 521 aa7.35□□□□□ -1.23
C11orf54-202ENST00000354421 MMP2P08253 660 aa7.35□□□□□ -1.23
C11orf54-202ENST00000354421 ZNF286BP0CG31 522 aa7.35□□□□□ -1.23
C11orf54-202ENST00000354421 PCNAP12004 261 aa7.35□□□□□ -1.23
C11orf54-202ENST00000354421 HOXD8P13378 290 aaPredicted RBP7.35□□□□□ -1.23
C11orf54-202ENST00000354421 MSH3P20585 1137 aa7.35□□□□□ -1.23
C11orf54-202ENST00000354421 CCND3P30281 292 aaPredicted RBP7.35□□□□□ -1.23
C11orf54-202ENST00000354421 SOX11P35716 441 aa7.35□□□□□ -1.23
C11orf54-202ENST00000354421 DCTP40126 519 aa7.35□□□□□ -1.23
C11orf54-202ENST00000354421 LHX1P48742 406 aa7.35□□□□□ -1.23
C11orf54-202ENST00000354421 RENBPP51606 427 aa7.35□□□□□ -1.23
C11orf54-202ENST00000354421 SLC35A2P78381 396 aa7.35□□□□□ -1.23
C11orf54-202ENST00000354421 CACNB2Q08289 660 aaPredicted RBP7.35□□□□□ -1.23
C11orf54-202ENST00000354421 PPIGQ13427 754 aaKnown RBP eCLIP7.35□□□□□ -1.23
C11orf54-202ENST00000354421 TYSND1Q2T9J0 566 aa7.35□□□□□ -1.23
C11orf54-202ENST00000354421 TMEM236Q5W0B7 351 aa7.35□□□□□ -1.23
C11orf54-202ENST00000354421 MRNIPQ6NTE8 343 aa7.35□□□□□ -1.23
C11orf54-202ENST00000354421 ENPP6Q6UWR7 440 aa7.35□□□□□ -1.23
C11orf54-202ENST00000354421 KDELC2Q7Z4H8 507 aa7.35□□□□□ -1.23
C11orf54-202ENST00000354421 HIPK1Q86Z02 1210 aa7.35□□□□□ -1.23
C11orf54-202ENST00000354421 DCP2Q8IU60 420 aaKnown RBP7.35□□□□□ -1.23
C11orf54-202ENST00000354421 SNX29P2Q8IUI4 249 aa7.35□□□□□ -1.23
C11orf54-202ENST00000354421 LYSMD2Q8IV50 215 aa7.35□□□□□ -1.23
C11orf54-202ENST00000354421 TMEM86AQ8N2M4 240 aa7.35□□□□□ -1.23
C11orf54-202ENST00000354421 RYBPQ8N488 228 aaPredicted RBP7.35□□□□□ -1.23
C11orf54-202ENST00000354421 CHCHD4Q8N4Q1 142 aa7.35□□□□□ -1.23
C11orf54-202ENST00000354421 TEX26Q8N6G2 289 aa7.35□□□□□ -1.23
C11orf54-202ENST00000354421 ZNF548Q8NEK5 533 aaPredicted RBP7.35□□□□□ -1.23
C11orf54-202ENST00000354421 OR56A4Q8NGH8 313 aa7.35□□□□□ -1.23
C11orf54-202ENST00000354421 GLMNQ92990 594 aa7.35□□□□□ -1.23
C11orf54-202ENST00000354421 RHBDF1Q96CC6 855 aa7.35□□□□□ -1.23
C11orf54-202ENST00000354421 ASIC4Q96FT7 647 aa7.35□□□□□ -1.23
C11orf54-202ENST00000354421 SMARCD1Q96GM5 515 aa7.35□□□□□ -1.23
C11orf54-202ENST00000354421 ZNF486Q96H40 463 aaPredicted RBP7.35□□□□□ -1.23
C11orf54-202ENST00000354421 ASPSCR1Q9BZE9 553 aa7.35□□□□□ -1.23
C11orf54-202ENST00000354421 SIK2Q9H0K1 926 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms