RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 USE1Q9NZ43 259 aa21.57■■□□□ 1.04
UPF3A-201ENST00000351487 IFT80Q9P2H3 777 aaPredicted RBP21.57■■□□□ 1.04
UPF3A-201ENST00000351487 EBF1Q9UH73 591 aa21.57■■□□□ 1.04
UPF3A-201ENST00000351487 TMED5Q9Y3A6 229 aa21.57■■□□□ 1.04
UPF3A-201ENST00000351487 A0A1W2PRU2 124 aa21.57■■□□□ 1.04
UPF3A-201ENST00000351487 SERTM1A2A2V5 107 aa21.57■■□□□ 1.04
UPF3A-201ENST00000351487 GRM6O15303 877 aa21.57■■□□□ 1.04
UPF3A-201ENST00000351487 BNIP3LO60238 219 aa21.57■■□□□ 1.04
UPF3A-201ENST00000351487 HIST1H2AGP0C0S8 130 aaPredicted RBP21.57■■□□□ 1.04
UPF3A-201ENST00000351487 HIST1H2ADP20671 130 aa21.57■■□□□ 1.04
UPF3A-201ENST00000351487 HNRNPFP52597 415 aaKnown RBP21.57■■□□□ 1.04
UPF3A-201ENST00000351487 HPCAP84074 193 aa21.57■■□□□ 1.04
UPF3A-201ENST00000351487 HSPA14Q0VDF9 509 aa21.57■■□□□ 1.04
UPF3A-201ENST00000351487 EPS8Q12929 822 aa21.57■■□□□ 1.04
UPF3A-201ENST00000351487 PMS2P3Q13401 168 aa21.57■■□□□ 1.04
UPF3A-201ENST00000351487 PLEKHS1Q5SXH7 462 aa21.57■■□□□ 1.04
UPF3A-201ENST00000351487 PJA1Q8NG27 643 aa21.57■■□□□ 1.04
UPF3A-201ENST00000351487 CMTM7Q96FZ5 175 aa21.57■■□□□ 1.04
UPF3A-201ENST00000351487 HIST1H2AHQ96KK5 128 aa21.57■■□□□ 1.04
UPF3A-201ENST00000351487 HIST1H2AJQ99878 128 aa21.57■■□□□ 1.04
UPF3A-201ENST00000351487 H2AFJQ9BTM1 129 aa21.57■■□□□ 1.04
UPF3A-201ENST00000351487 TBCDQ9BTW9 1192 aa21.57■■□□□ 1.04
UPF3A-201ENST00000351487 EMILIN2Q9BXX0 1053 aa21.57■■□□□ 1.04
UPF3A-201ENST00000351487 CXorf21Q9HAI6 301 aa21.57■■□□□ 1.04
UPF3A-201ENST00000351487 B4GALT6Q9UBX8 382 aa21.57■■□□□ 1.04
UPF3A-201ENST00000351487 MBD1Q9UIS9 605 aaPredicted RBP21.57■■□□□ 1.04
UPF3A-201ENST00000351487 SLC25A13Q9UJS0 675 aa21.57■■□□□ 1.04
UPF3A-201ENST00000351487 MAGED1Q9Y5V3 778 aaPredicted RBP21.57■■□□□ 1.04
UPF3A-201ENST00000351487 PLXNA2O75051 1894 aa21.56■■□□□ 1.04
UPF3A-201ENST00000351487 GFYI3L273 518 aa21.56■■□□□ 1.04
UPF3A-201ENST00000351487 CPNE6O95741 557 aa21.56■■□□□ 1.04
UPF3A-201ENST00000351487 CST1P01037 141 aa21.56■■□□□ 1.04
UPF3A-201ENST00000351487 UGT2B4P06133 528 aa21.56■■□□□ 1.04
UPF3A-201ENST00000351487 DCKP27707 260 aa21.56■■□□□ 1.04
UPF3A-201ENST00000351487 MAPK1P28482 360 aa21.56■■□□□ 1.04
UPF3A-201ENST00000351487 S100A3P33764 101 aa21.56■■□□□ 1.04
UPF3A-201ENST00000351487 PPM1AP35813 382 aa21.56■■□□□ 1.04
UPF3A-201ENST00000351487 PPP2R2BQ00005 443 aa21.56■■□□□ 1.04
UPF3A-201ENST00000351487 PON2Q15165 354 aa21.56■■□□□ 1.04
UPF3A-201ENST00000351487 C12orf43Q96C57 262 aaKnown RBP21.56■■□□□ 1.04
UPF3A-201ENST00000351487 ITCHQ96J02 903 aa21.56■■□□□ 1.04
UPF3A-201ENST00000351487 OSBPL10Q9BXB5 764 aa21.56■■□□□ 1.04
UPF3A-201ENST00000351487 ZBP1Q9H171 429 aa21.56■■□□□ 1.04
UPF3A-201ENST00000351487 RMND5AQ9H871 391 aa21.56■■□□□ 1.04
UPF3A-201ENST00000351487 CDH7Q9ULB5 785 aa21.56■■□□□ 1.04
UPF3A-201ENST00000351487 C16orf96A6NNT2 1141 aa21.56■■□□□ 1.04
UPF3A-201ENST00000351487 PRKD3O94806 890 aa21.56■■□□□ 1.04
UPF3A-201ENST00000351487 MYCP01106 439 aaPredicted RBP21.56■■□□□ 1.04
UPF3A-201ENST00000351487 ATP1B2P14415 290 aaPredicted RBP21.56■■□□□ 1.04
UPF3A-201ENST00000351487 GJA1P17302 382 aa21.56■■□□□ 1.04
UPF3A-201ENST00000351487 PTPN6P29350 595 aa21.56■■□□□ 1.04
UPF3A-201ENST00000351487 RPS6KA3P51812 740 aa21.56■■□□□ 1.04
UPF3A-201ENST00000351487 NUP107P57740 925 aa21.56■■□□□ 1.04
UPF3A-201ENST00000351487 RAB39AQ14964 217 aa21.56■■□□□ 1.04
UPF3A-201ENST00000351487 PTCHD3Q3KNS1 767 aa21.56■■□□□ 1.04
UPF3A-201ENST00000351487 ZIK1Q3SY52 487 aaPredicted RBP21.56■■□□□ 1.04
UPF3A-201ENST00000351487 NEK5Q6P3R8 708 aa21.56■■□□□ 1.04
UPF3A-201ENST00000351487 GCNT7Q6ZNI0 430 aa21.56■■□□□ 1.04
UPF3A-201ENST00000351487 VRK3Q8IV63 474 aa21.56■■□□□ 1.04
UPF3A-201ENST00000351487 TMEM132CQ8N3T6 1108 aa21.56■■□□□ 1.04
UPF3A-201ENST00000351487 BEND7Q8N7W2 519 aaPredicted RBP21.56■■□□□ 1.04
UPF3A-201ENST00000351487 TERB1Q8NA31 727 aa21.56■■□□□ 1.04
UPF3A-201ENST00000351487 TUBA1CQ9BQE3 449 aa21.56■■□□□ 1.04
UPF3A-201ENST00000351487 SLC46A2Q9BY10 475 aa21.56■■□□□ 1.04
UPF3A-201ENST00000351487 POLR1BQ9H9Y6 1135 aa21.56■■□□□ 1.04
UPF3A-201ENST00000351487 CDC14AQ9UNH5 594 aa21.56■■□□□ 1.04
UPF3A-201ENST00000351487 CREG1O75629 220 aa21.55■■□□□ 1.04
UPF3A-201ENST00000351487 SDC1P18827 310 aa21.55■■□□□ 1.04
UPF3A-201ENST00000351487 SHMT2P34897 504 aa21.55■■□□□ 1.04
UPF3A-201ENST00000351487 AP1S2P56377 157 aa21.55■■□□□ 1.04
UPF3A-201ENST00000351487 MYBPC3Q14896 1274 aa21.55■■□□□ 1.04
UPF3A-201ENST00000351487 ZNF773Q6PK81 442 aa21.55■■□□□ 1.04
UPF3A-201ENST00000351487 MSANTD1Q6ZTZ1 278 aa21.55■■□□□ 1.04
UPF3A-201ENST00000351487 KCTD8Q6ZWB6 473 aa21.55■■□□□ 1.04
UPF3A-201ENST00000351487 NEK10Q6ZWH5 1172 aa21.55■■□□□ 1.04
UPF3A-201ENST00000351487 PHACTR4Q8IZ21 702 aa21.55■■□□□ 1.04
UPF3A-201ENST00000351487 CNDP2Q96KP4 475 aaKnown RBP21.55■■□□□ 1.04
UPF3A-201ENST00000351487 MAGEB10Q96LZ2 347 aaPredicted RBP21.55■■□□□ 1.04
UPF3A-201ENST00000351487 DCTN2Q13561 401 aaKnown RBP21.55■■□□□ 1.04
UPF3A-201ENST00000351487 TTC23Q5W5X9 447 aa21.55■■□□□ 1.04
UPF3A-201ENST00000351487 ASTLQ6HA08 431 aaPredicted RBP21.55■■□□□ 1.04
UPF3A-201ENST00000351487 RASGRP3Q8IV61 690 aa21.55■■□□□ 1.04
UPF3A-201ENST00000351487 FAM120BQ96EK7 910 aaKnown RBP21.55■■□□□ 1.04
UPF3A-201ENST00000351487 SMG9Q9H0W8 520 aaKnown RBP21.55■■□□□ 1.04
UPF3A-201ENST00000351487 TOR3AQ9H497 397 aa21.55■■□□□ 1.04
UPF3A-201ENST00000351487 PPT2Q9UMR5 302 aa21.55■■□□□ 1.04
UPF3A-201ENST00000351487 TRIM17Q9Y577 477 aa21.55■■□□□ 1.04
UPF3A-201ENST00000351487 PABPN1LA6NDY0 278 aaKnown RBP21.54■■□□□ 1.04
UPF3A-201ENST00000351487 WNT9AO14904 365 aa21.54■■□□□ 1.04
UPF3A-201ENST00000351487 KPNA5O15131 536 aa21.54■■□□□ 1.04
UPF3A-201ENST00000351487 CTSAP10619 480 aa21.54■■□□□ 1.04
UPF3A-201ENST00000351487 CYP2A7P20853 494 aa21.54■■□□□ 1.04
UPF3A-201ENST00000351487 ELK4P28324 431 aa21.54■■□□□ 1.04
UPF3A-201ENST00000351487 LILRA6Q6PI73 481 aa21.54■■□□□ 1.04
UPF3A-201ENST00000351487 CCDC149Q6ZUS6 474 aa21.54■■□□□ 1.04
UPF3A-201ENST00000351487 DET1Q7L5Y6 550 aa21.54■■□□□ 1.04
UPF3A-201ENST00000351487 THAP5Q7Z6K1 395 aa21.54■■□□□ 1.04
UPF3A-201ENST00000351487 SKA2Q8WVK7 121 aaPredicted RBP21.54■■□□□ 1.04
UPF3A-201ENST00000351487 FCRL1Q96LA6 429 aa21.54■■□□□ 1.04
UPF3A-201ENST00000351487 RBM4BQ9BQ04 359 aaKnown RBP21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms