RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 MMP2P08253 660 aa14.53□□□□□ -0.08
CLCN1-201ENST00000343257 HOXA9P31269 272 aa14.53□□□□□ -0.08
CLCN1-201ENST00000343257 KRT6CP48668 564 aa14.53□□□□□ -0.08
CLCN1-201ENST00000343257 ZNF45Q02386 682 aa14.53□□□□□ -0.08
CLCN1-201ENST00000343257 KCTD2Q14681 263 aa14.53□□□□□ -0.08
CLCN1-201ENST00000343257 ARMCX4Q5H9R4 360 aa14.53□□□□□ -0.08
CLCN1-201ENST00000343257 SLX4IPQ5VYV7 408 aa14.53□□□□□ -0.08
CLCN1-201ENST00000343257 CHPFQ8IZ52 775 aa14.53□□□□□ -0.08
CLCN1-201ENST00000343257 IMP4Q96G21 291 aaKnown RBP14.53□□□□□ -0.08
CLCN1-201ENST00000343257 SNX18Q96RF0 628 aa14.53□□□□□ -0.08
CLCN1-201ENST00000343257 MROH6A6NGR9 719 aa14.53□□□□□ -0.08
CLCN1-201ENST00000343257 UPK3BL1B0FP48 263 aa14.53□□□□□ -0.08
CLCN1-201ENST00000343257 UPK3BL2E5RIL1 263 aa14.53□□□□□ -0.08
CLCN1-201ENST00000343257 SCELO95171 688 aa14.53□□□□□ -0.08
CLCN1-201ENST00000343257 ITGAMP11215 1152 aa14.53□□□□□ -0.08
CLCN1-201ENST00000343257 RFX4Q33E94 735 aa14.53□□□□□ -0.08
CLCN1-201ENST00000343257 PTCHD3Q3KNS1 767 aa14.53□□□□□ -0.08
CLCN1-201ENST00000343257 TIGD7Q6NT04 549 aaPredicted RBP14.53□□□□□ -0.08
CLCN1-201ENST00000343257 RAB43Q86YS6 212 aa14.53□□□□□ -0.08
CLCN1-201ENST00000343257 NATD1Q8N6N6 113 aa14.53□□□□□ -0.08
CLCN1-201ENST00000343257 GLB1L3Q8NCI6 653 aaPredicted RBP14.53□□□□□ -0.08
CLCN1-201ENST00000343257 OR8J3Q8NGG0 315 aa14.53□□□□□ -0.08
CLCN1-201ENST00000343257 HCAR2Q8TDS4 363 aa14.53□□□□□ -0.08
CLCN1-201ENST00000343257 TPD52L3Q96J77 140 aa14.53□□□□□ -0.08
CLCN1-201ENST00000343257 NUSAP1Q9BXS6 441 aaKnown RBP14.53□□□□□ -0.08
CLCN1-201ENST00000343257 MUTYHQ9UIF7 546 aa14.53□□□□□ -0.08
CLCN1-201ENST00000343257 GABRQQ9UN88 632 aa14.53□□□□□ -0.08
CLCN1-201ENST00000343257 TTC3P53804 2025 aa14.53□□□□□ -0.08
CLCN1-201ENST00000343257 SEC22BO75396 215 aa14.53□□□□□ -0.08
CLCN1-201ENST00000343257 RPLP0P05388 317 aaKnown RBP14.53□□□□□ -0.08
CLCN1-201ENST00000343257 PGRP06401 933 aa14.53□□□□□ -0.08
CLCN1-201ENST00000343257 WARSP23381 471 aaKnown RBP14.53□□□□□ -0.08
CLCN1-201ENST00000343257 ADCYAP1R1P41586 468 aa14.53□□□□□ -0.08
CLCN1-201ENST00000343257 TUBA1BP68363 451 aa14.53□□□□□ -0.08
CLCN1-201ENST00000343257 MARCH8Q5T0T0 291 aa14.53□□□□□ -0.08
CLCN1-201ENST00000343257 FAM171A1Q5VUB5 890 aa14.53□□□□□ -0.08
CLCN1-201ENST00000343257 OR2T5Q6IEZ7 315 aa14.53□□□□□ -0.08
CLCN1-201ENST00000343257 TUBA1AQ71U36 451 aa14.53□□□□□ -0.08
CLCN1-201ENST00000343257 ENTHD1Q8IYW4 607 aa14.53□□□□□ -0.08
CLCN1-201ENST00000343257 LINC01465Q8N7H1 131 aa14.53□□□□□ -0.08
CLCN1-201ENST00000343257 KIAA1958Q8N8K9 716 aa14.53□□□□□ -0.08
CLCN1-201ENST00000343257 OR5H6Q8NGV6 325 aa14.53□□□□□ -0.08
CLCN1-201ENST00000343257 OR2T29Q8NH02 315 aa14.53□□□□□ -0.08
CLCN1-201ENST00000343257 APH1BQ8WW43 257 aa14.53□□□□□ -0.08
CLCN1-201ENST00000343257 SYTL2Q9HCH5 934 aa14.53□□□□□ -0.08
CLCN1-201ENST00000343257 RAD18Q9NS91 495 aa14.53□□□□□ -0.08
CLCN1-201ENST00000343257 MED16Q9Y2X0 877 aa14.53□□□□□ -0.08
CLCN1-201ENST00000343257 DERAQ9Y315 318 aa14.53□□□□□ -0.08
CLCN1-201ENST00000343257 SMIM30A4D0T7 59 aa14.52□□□□□ -0.08
CLCN1-201ENST00000343257 EVPLLA8MZ36 301 aa14.52□□□□□ -0.08
CLCN1-201ENST00000343257 E2F3O00716 465 aa14.52□□□□□ -0.08
CLCN1-201ENST00000343257 KIAA0513O60268 411 aa14.52□□□□□ -0.08
CLCN1-201ENST00000343257 PTHP01270 115 aa14.52□□□□□ -0.08
CLCN1-201ENST00000343257 SERPINF2P08697 491 aa14.52□□□□□ -0.08
CLCN1-201ENST00000343257 PRKACBP22694 351 aa14.52□□□□□ -0.08
CLCN1-201ENST00000343257 ARHGAP1Q07960 439 aa14.52□□□□□ -0.08
CLCN1-201ENST00000343257 GRIK2Q13002 908 aa14.52□□□□□ -0.08
CLCN1-201ENST00000343257 IL18R1Q13478 541 aa14.52□□□□□ -0.08
CLCN1-201ENST00000343257 SHQ1Q6PI26 577 aaKnown RBP14.52□□□□□ -0.08
CLCN1-201ENST00000343257 SYCE2Q6PIF2 218 aa14.52□□□□□ -0.08
CLCN1-201ENST00000343257 ALKAL1Q6UXT8 129 aa14.52□□□□□ -0.08
CLCN1-201ENST00000343257 PRR23CQ6ZRP0 262 aa14.52□□□□□ -0.08
CLCN1-201ENST00000343257 ZNF675Q8TD23 568 aa14.52□□□□□ -0.08
CLCN1-201ENST00000343257 TMEM40Q8WWA1 233 aa14.52□□□□□ -0.08
CLCN1-201ENST00000343257 EXOC2Q96KP1 924 aa14.52□□□□□ -0.08
CLCN1-201ENST00000343257 ZNF490Q9ULM2 529 aaPredicted RBP14.52□□□□□ -0.08
CLCN1-201ENST00000343257 A0A0G2JMP0 313 aa14.52□□□□□ -0.09
CLCN1-201ENST00000343257 A0A0X1KG70 313 aa14.52□□□□□ -0.09
CLCN1-201ENST00000343257 LOC105371267A0A1B0GV96 52 aa14.52□□□□□ -0.09
CLCN1-201ENST00000343257 MEIOCA2RUB1 952 aa14.52□□□□□ -0.09
CLCN1-201ENST00000343257 H3BM21 787 aa14.52□□□□□ -0.09
CLCN1-201ENST00000343257 ANKRD28O15084 1053 aa14.52□□□□□ -0.09
CLCN1-201ENST00000343257 HMBSP08397 361 aa14.52□□□□□ -0.09
CLCN1-201ENST00000343257 CBLP22681 906 aa14.52□□□□□ -0.09
CLCN1-201ENST00000343257 AQP1P29972 269 aa14.52□□□□□ -0.09
CLCN1-201ENST00000343257 VLDLRP98155 873 aa14.52□□□□□ -0.09
CLCN1-201ENST00000343257 SMARCB1Q12824 385 aa14.52□□□□□ -0.09
CLCN1-201ENST00000343257 FADDQ13158 208 aa14.52□□□□□ -0.09
CLCN1-201ENST00000343257 SLC14A1Q13336 389 aa14.52□□□□□ -0.09
CLCN1-201ENST00000343257 MED22Q15528 200 aa14.52□□□□□ -0.09
CLCN1-201ENST00000343257 SDE2Q6IQ49 451 aa14.52□□□□□ -0.09
CLCN1-201ENST00000343257 CAPN13Q6MZZ7 669 aaPredicted RBP14.52□□□□□ -0.09
CLCN1-201ENST00000343257 PAMR1Q6UXH9 720 aa14.52□□□□□ -0.09
CLCN1-201ENST00000343257 KLHDC8BQ8IXV7 354 aa14.52□□□□□ -0.09
CLCN1-201ENST00000343257 UTP15Q8TED0 518 aaKnown RBP14.52□□□□□ -0.09
CLCN1-201ENST00000343257 FBLIM1Q8WUP2 373 aa14.52□□□□□ -0.09
CLCN1-201ENST00000343257 ZNF717Q9BY31 904 aaPredicted RBP14.52□□□□□ -0.09
CLCN1-201ENST00000343257 TMEM39AQ9NV64 488 aa14.52□□□□□ -0.09
CLCN1-201ENST00000343257 C1orf109Q9NX04 203 aa14.52□□□□□ -0.09
CLCN1-201ENST00000343257 HS3ST4Q9Y661 456 aa14.52□□□□□ -0.09
CLCN1-201ENST00000343257 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.51□□□□□ -0.09
CLCN1-201ENST00000343257 ADM5C9JUS6 153 aa14.51□□□□□ -0.09
CLCN1-201ENST00000343257 ARNTLO00327 626 aa14.51□□□□□ -0.09
CLCN1-201ENST00000343257 GABRDO14764 452 aa14.51□□□□□ -0.09
CLCN1-201ENST00000343257 TSC22D2O75157 780 aa14.51□□□□□ -0.09
CLCN1-201ENST00000343257 SCO1O75880 301 aa14.51□□□□□ -0.09
CLCN1-201ENST00000343257 NPPAP01160 153 aa14.51□□□□□ -0.09
CLCN1-201ENST00000343257 CHRM5P08912 532 aaPredicted RBP14.51□□□□□ -0.09
CLCN1-201ENST00000343257 ATXN1LP0C7T5 689 aaKnown RBP14.51□□□□□ -0.09
CLCN1-201ENST00000343257 COL6A1P12109 1028 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms