RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 C1QTNF9P0C862 333 aa12.78□□□□□ -0.36
TUBD1-202ENST00000340993 CBSLP0DN79 551 aa12.78□□□□□ -0.36
TUBD1-202ENST00000340993 UGT2B7P16662 529 aa12.78□□□□□ -0.36
TUBD1-202ENST00000340993 CD9P21926 228 aa12.78□□□□□ -0.36
TUBD1-202ENST00000340993 PRDX3P30048 256 aaKnown RBP12.78□□□□□ -0.36
TUBD1-202ENST00000340993 CBSP35520 551 aa12.78□□□□□ -0.36
TUBD1-202ENST00000340993 ARL4DP49703 201 aa12.78□□□□□ -0.36
TUBD1-202ENST00000340993 ZFP36L1Q07352 338 aaKnown RBP12.78□□□□□ -0.36
TUBD1-202ENST00000340993 CYP4F3Q08477 520 aa12.78□□□□□ -0.36
TUBD1-202ENST00000340993 DLG1Q12959 904 aa12.78□□□□□ -0.36
TUBD1-202ENST00000340993 DEFB110Q30KQ9 67 aa12.78□□□□□ -0.36
TUBD1-202ENST00000340993 C18orf21Q32NC0 220 aaPredicted RBP12.78□□□□□ -0.36
TUBD1-202ENST00000340993 FRA10AC1Q70Z53 315 aa12.78□□□□□ -0.36
TUBD1-202ENST00000340993 OR9A1PQ8NGU1 263 aa12.78□□□□□ -0.36
TUBD1-202ENST00000340993 AENQ8WTP8 325 aaKnown RBP12.78□□□□□ -0.36
TUBD1-202ENST00000340993 KCTD4Q8WVF5 259 aa12.78□□□□□ -0.36
TUBD1-202ENST00000340993 RAD51AP1Q96B01 352 aa12.78□□□□□ -0.36
TUBD1-202ENST00000340993 MENTQ9BUN1 341 aa12.78□□□□□ -0.36
TUBD1-202ENST00000340993 APMAPQ9HDC9 416 aa12.78□□□□□ -0.36
TUBD1-202ENST00000340993 ACACBO00763 2458 aa12.77□□□□□ -0.36
TUBD1-202ENST00000340993 AHCTF1Q8WYP5 2266 aa12.77□□□□□ -0.36
TUBD1-202ENST00000340993 MN1Q10571 1320 aaPredicted RBP12.77□□□□□ -0.36
TUBD1-202ENST00000340993 TLDC2A0PJX2 215 aa12.77□□□□□ -0.36
TUBD1-202ENST00000340993 PABPN1LA6NDY0 278 aaKnown RBP12.77□□□□□ -0.36
TUBD1-202ENST00000340993 C2orf74A8MZ97 194 aa12.77□□□□□ -0.36
TUBD1-202ENST00000340993 GOLGA8RI6L899 631 aa12.77□□□□□ -0.36
TUBD1-202ENST00000340993 NRP2O60462 931 aa12.77□□□□□ -0.36
TUBD1-202ENST00000340993 BRINP1O60477 761 aa12.77□□□□□ -0.36
TUBD1-202ENST00000340993 TNFSF15O95150 251 aa12.77□□□□□ -0.36
TUBD1-202ENST00000340993 ALDOAP04075 364 aaKnown RBP12.77□□□□□ -0.36
TUBD1-202ENST00000340993 ABHD2P08910 425 aa12.77□□□□□ -0.36
TUBD1-202ENST00000340993 SLC35E2BP0CK96 405 aa12.77□□□□□ -0.36
TUBD1-202ENST00000340993 ST6GAL1P15907 406 aa12.77□□□□□ -0.36
TUBD1-202ENST00000340993 CYP2A7P20853 494 aa12.77□□□□□ -0.36
TUBD1-202ENST00000340993 TYK2P29597 1187 aa12.77□□□□□ -0.36
TUBD1-202ENST00000340993 CCNFP41002 786 aa12.77□□□□□ -0.36
TUBD1-202ENST00000340993 THEMIS2Q5TEJ8 643 aa12.77□□□□□ -0.36
TUBD1-202ENST00000340993 WDR93Q6P2C0 686 aa12.77□□□□□ -0.36
TUBD1-202ENST00000340993 PYCR2Q96C36 320 aa12.77□□□□□ -0.36
TUBD1-202ENST00000340993 NAF1Q96HR8 494 aaKnown RBP12.77□□□□□ -0.36
TUBD1-202ENST00000340993 CMKLR1Q99788 373 aa12.77□□□□□ -0.36
TUBD1-202ENST00000340993 ZNF358Q9NW07 568 aa12.77□□□□□ -0.36
TUBD1-202ENST00000340993 ARL15Q9NXU5 204 aa12.77□□□□□ -0.36
TUBD1-202ENST00000340993 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.77□□□□□ -0.36
TUBD1-202ENST00000340993 MAP1BP46821 2468 aaKnown RBP12.77□□□□□ -0.37
TUBD1-202ENST00000340993 CFAP47Q6ZTR5 3102 aa12.77□□□□□ -0.37
TUBD1-202ENST00000340993 MDC1Q14676 2089 aaKnown RBP12.76□□□□□ -0.37
TUBD1-202ENST00000340993 CCDC187A0A096LP49 1063 aa12.76□□□□□ -0.37
TUBD1-202ENST00000340993 PLD2O14939 933 aa12.76□□□□□ -0.37
TUBD1-202ENST00000340993 EBLN1P0CF75 366 aa12.76□□□□□ -0.37
TUBD1-202ENST00000340993 GRIA3P42263 894 aa12.76□□□□□ -0.37
TUBD1-202ENST00000340993 SERPINB8P50452 374 aa12.76□□□□□ -0.37
TUBD1-202ENST00000340993 PNLIPRP1P54315 467 aa12.76□□□□□ -0.37
TUBD1-202ENST00000340993 CAMK2BQ13554 666 aa12.76□□□□□ -0.37
TUBD1-202ENST00000340993 SF1Q15637 639 aaKnown RBP12.76□□□□□ -0.37
TUBD1-202ENST00000340993 SPESP1Q6UW49 350 aa12.76□□□□□ -0.37
TUBD1-202ENST00000340993 NEK10Q6ZWH5 1172 aa12.76□□□□□ -0.37
TUBD1-202ENST00000340993 TBC1D1Q86TI0 1168 aaPredicted RBP12.76□□□□□ -0.37
TUBD1-202ENST00000340993 NKAPQ8N5F7 415 aaKnown RBP12.76□□□□□ -0.37
TUBD1-202ENST00000340993 MAGEC3Q8TD91 643 aa12.76□□□□□ -0.37
TUBD1-202ENST00000340993 ZFPM2Q8WW38 1151 aa12.76□□□□□ -0.37
TUBD1-202ENST00000340993 PTERQ96BW5 349 aa12.76□□□□□ -0.37
TUBD1-202ENST00000340993 NXNL1Q96CM4 212 aa12.76□□□□□ -0.37
TUBD1-202ENST00000340993 OR2A14Q96R47 310 aa12.76□□□□□ -0.37
TUBD1-202ENST00000340993 EGFL8Q99944 293 aa12.76□□□□□ -0.37
TUBD1-202ENST00000340993 FUT8Q9BYC5 575 aa12.76□□□□□ -0.37
TUBD1-202ENST00000340993 EPB41L1Q9H4G0 881 aa12.76□□□□□ -0.37
TUBD1-202ENST00000340993 ALG9Q9H6U8 611 aa12.76□□□□□ -0.37
TUBD1-202ENST00000340993 PARVBQ9HBI1 364 aa12.76□□□□□ -0.37
TUBD1-202ENST00000340993 SYTL2Q9HCH5 934 aa12.76□□□□□ -0.37
TUBD1-202ENST00000340993 PCMTD2Q9NV79 361 aa12.76□□□□□ -0.37
TUBD1-202ENST00000340993 KLHL42Q9P2K6 505 aa12.76□□□□□ -0.37
TUBD1-202ENST00000340993 LNPEPQ9UIQ6 1025 aa12.76□□□□□ -0.37
TUBD1-202ENST00000340993 POMT2Q9UKY4 750 aa12.76□□□□□ -0.37
TUBD1-202ENST00000340993 MSRB2Q9Y3D2 182 aa12.76□□□□□ -0.37
TUBD1-202ENST00000340993 NEUROG3Q9Y4Z2 214 aa12.76□□□□□ -0.37
TUBD1-202ENST00000340993 A0A096LPK6 155 aa12.76□□□□□ -0.37
TUBD1-202ENST00000340993 GFYI3L273 518 aa12.76□□□□□ -0.37
TUBD1-202ENST00000340993 MYO1CO00159 1063 aa12.76□□□□□ -0.37
TUBD1-202ENST00000340993 KDM1AO60341 852 aa12.76□□□□□ -0.37
TUBD1-202ENST00000340993 C9P02748 559 aa12.76□□□□□ -0.37
TUBD1-202ENST00000340993 C2P06681 752 aa12.76□□□□□ -0.37
TUBD1-202ENST00000340993 C8GP07360 202 aa12.76□□□□□ -0.37
TUBD1-202ENST00000340993 FGF3P11487 239 aaPredicted RBP12.76□□□□□ -0.37
TUBD1-202ENST00000340993 MAGP20916 626 aa12.76□□□□□ -0.37
TUBD1-202ENST00000340993 IMPA1P29218 277 aa12.76□□□□□ -0.37
TUBD1-202ENST00000340993 CCKBRP32239 447 aa12.76□□□□□ -0.37
TUBD1-202ENST00000340993 OR4D1Q15615 310 aa12.76□□□□□ -0.37
TUBD1-202ENST00000340993 GPR19Q15760 415 aa12.76□□□□□ -0.37
TUBD1-202ENST00000340993 ZKSCAN8Q15776 578 aaPredicted RBP12.76□□□□□ -0.37
TUBD1-202ENST00000340993 TAF1BQ53T94 588 aaPredicted RBP12.76□□□□□ -0.37
TUBD1-202ENST00000340993 SBSNQ6UWP8 590 aa12.76□□□□□ -0.37
TUBD1-202ENST00000340993 TAOK1Q7L7X3 1001 aa12.76□□□□□ -0.37
TUBD1-202ENST00000340993 PLD6Q8N2A8 252 aaKnown RBP12.76□□□□□ -0.37
TUBD1-202ENST00000340993 RAB42Q8N4Z0 105 aa12.76□□□□□ -0.37
TUBD1-202ENST00000340993 MCOLN3Q8TDD5 553 aa12.76□□□□□ -0.37
TUBD1-202ENST00000340993 ZNF480Q8WV37 535 aa12.76□□□□□ -0.37
TUBD1-202ENST00000340993 OR6C2Q9NZP2 312 aa12.76□□□□□ -0.37
TUBD1-202ENST00000340993 AKAP7Q9P0M2 348 aaPredicted RBP12.76□□□□□ -0.37
TUBD1-202ENST00000340993 STOX2Q9P2F5 926 aaPredicted RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms