RNA–Protein interactions for RNA: ENST00000339987.7

SDCBP2-201, Transcript of syndecan binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDCBP2, Length 1,404 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-201ENST00000339987 PNLIPRP1P54315 467 aa17.34■□□□□ 0.37
SDCBP2-201ENST00000339987 EPHA4P54764 986 aa17.34■□□□□ 0.37
SDCBP2-201ENST00000339987 SETDB1Q15047 1291 aa17.34■□□□□ 0.37
SDCBP2-201ENST00000339987 PLCL1Q15111 1095 aa17.34■□□□□ 0.37
SDCBP2-201ENST00000339987 PFKFB4Q16877 469 aa17.34■□□□□ 0.37
SDCBP2-201ENST00000339987 KLHDC8AQ8IYD2 350 aa17.34■□□□□ 0.37
SDCBP2-201ENST00000339987 PTGR2Q8N8N7 351 aaPredicted RBP17.34■□□□□ 0.37
SDCBP2-201ENST00000339987 OR2L8Q8NGY9 312 aa17.34■□□□□ 0.37
SDCBP2-201ENST00000339987 NAT6Q93015 286 aa17.34■□□□□ 0.37
SDCBP2-201ENST00000339987 SLC38A3Q99624 504 aa17.34■□□□□ 0.37
SDCBP2-201ENST00000339987 TWSG1Q9GZX9 223 aa17.34■□□□□ 0.37
SDCBP2-201ENST00000339987 OR6C2Q9NZP2 312 aa17.34■□□□□ 0.37
SDCBP2-201ENST00000339987 LRIT1Q9P2V4 623 aa17.34■□□□□ 0.37
SDCBP2-201ENST00000339987 CIDEBQ9UHD4 219 aa17.34■□□□□ 0.37
SDCBP2-201ENST00000339987 ANKRD12Q6UB98 2062 aa17.33■□□□□ 0.37
SDCBP2-201ENST00000339987 EME2A4GXA9 379 aaPredicted RBP17.33■□□□□ 0.36
SDCBP2-201ENST00000339987 C4orf47A7E2U8 309 aa17.33■□□□□ 0.36
SDCBP2-201ENST00000339987 TAPBPO15533 448 aa17.33■□□□□ 0.36
SDCBP2-201ENST00000339987 CKMT1AP12532 417 aa17.33■□□□□ 0.36
SDCBP2-201ENST00000339987 GPR3P46089 330 aa17.33■□□□□ 0.36
SDCBP2-201ENST00000339987 SERPINB4P48594 390 aa17.33■□□□□ 0.36
SDCBP2-201ENST00000339987 DUSP3P51452 185 aaPredicted RBP17.33■□□□□ 0.36
SDCBP2-201ENST00000339987 LIMK1P53667 647 aa17.33■□□□□ 0.36
SDCBP2-201ENST00000339987 PRKAA2P54646 552 aa17.33■□□□□ 0.36
SDCBP2-201ENST00000339987 WDR4P57081 412 aaKnown RBP17.33■□□□□ 0.36
SDCBP2-201ENST00000339987 PCLAFQ15004 111 aa17.33■□□□□ 0.36
SDCBP2-201ENST00000339987 METTL2BQ6P1Q9 378 aaKnown RBP17.33■□□□□ 0.36
SDCBP2-201ENST00000339987 AGTRAPQ6RW13 159 aa17.33■□□□□ 0.36
SDCBP2-201ENST00000339987 ALYREFQ86V81 257 aaKnown RBP17.33■□□□□ 0.36
SDCBP2-201ENST00000339987 AMIGO1Q86WK6 493 aa17.33■□□□□ 0.36
SDCBP2-201ENST00000339987 NAXDQ8IW45 347 aa17.33■□□□□ 0.36
SDCBP2-201ENST00000339987 ARFGAP2Q8N6H7 521 aa17.33■□□□□ 0.36
SDCBP2-201ENST00000339987 OR56A3Q8NH54 315 aa17.33■□□□□ 0.36
SDCBP2-201ENST00000339987 RHBDD1Q8TEB9 315 aa17.33■□□□□ 0.36
SDCBP2-201ENST00000339987 IL17FQ96PD4 163 aa17.33■□□□□ 0.36
SDCBP2-201ENST00000339987 SRMSQ9H3Y6 488 aa17.33■□□□□ 0.36
SDCBP2-201ENST00000339987 CNOT10Q9H9A5 744 aaKnown RBP17.33■□□□□ 0.36
SDCBP2-201ENST00000339987 WWOXQ9NZC7 414 aa17.33■□□□□ 0.36
SDCBP2-201ENST00000339987 USP34Q70CQ2 3546 aa17.33■□□□□ 0.36
SDCBP2-201ENST00000339987 VPS13AQ96RL7 3174 aa17.33■□□□□ 0.36
SDCBP2-201ENST00000339987 E7ENX8 843 aa17.32■□□□□ 0.36
SDCBP2-201ENST00000339987 BIRC5O15392 142 aa17.32■□□□□ 0.36
SDCBP2-201ENST00000339987 GDF9O60383 454 aa17.32■□□□□ 0.36
SDCBP2-201ENST00000339987 LDOC1O95751 146 aaPredicted RBP17.32■□□□□ 0.36
SDCBP2-201ENST00000339987 BPGMP07738 259 aa17.32■□□□□ 0.36
SDCBP2-201ENST00000339987 SLC6A12P48065 614 aa17.32■□□□□ 0.36
SDCBP2-201ENST00000339987 DNAJB13P59910 316 aa17.32■□□□□ 0.36
SDCBP2-201ENST00000339987 TAP2Q03519 686 aa17.32■□□□□ 0.36
SDCBP2-201ENST00000339987 ZXDCQ2QGD7 858 aaPredicted RBP17.32■□□□□ 0.36
SDCBP2-201ENST00000339987 STPG1Q5TH74 334 aa17.32■□□□□ 0.36
SDCBP2-201ENST00000339987 HHATQ5VTY9 493 aa17.32■□□□□ 0.36
SDCBP2-201ENST00000339987 RAB44Q7Z6P3 723 aaPredicted RBP17.32■□□□□ 0.36
SDCBP2-201ENST00000339987 LRRC56Q8IYG6 542 aaPredicted RBP17.32■□□□□ 0.36
SDCBP2-201ENST00000339987 SYTL1Q8IYJ3 562 aa17.32■□□□□ 0.36
SDCBP2-201ENST00000339987 OR4E2Q8NGC2 313 aa17.32■□□□□ 0.36
SDCBP2-201ENST00000339987 SETD7Q8WTS6 366 aaKnown RBP17.32■□□□□ 0.36
SDCBP2-201ENST00000339987 SMPDL3AQ92484 453 aa17.32■□□□□ 0.36
SDCBP2-201ENST00000339987 CNDP2Q96KP4 475 aaKnown RBP17.32■□□□□ 0.36
SDCBP2-201ENST00000339987 TMEM79Q9BSE2 394 aa17.32■□□□□ 0.36
SDCBP2-201ENST00000339987 TBC1D10AQ9BXI6 508 aa17.32■□□□□ 0.36
SDCBP2-201ENST00000339987 EPB41L1Q9H4G0 881 aa17.32■□□□□ 0.36
SDCBP2-201ENST00000339987 XKR8Q9H6D3 395 aa17.32■□□□□ 0.36
SDCBP2-201ENST00000339987 OXSMQ9NWU1 459 aa17.32■□□□□ 0.36
SDCBP2-201ENST00000339987 FAM53CQ9NYF3 392 aa17.32■□□□□ 0.36
SDCBP2-201ENST00000339987 TNPO3Q9Y5L0 923 aaKnown RBP17.32■□□□□ 0.36
SDCBP2-201ENST00000339987 SH3BP5O60239 455 aa17.31■□□□□ 0.36
SDCBP2-201ENST00000339987 MYF5P13349 255 aa17.31■□□□□ 0.36
SDCBP2-201ENST00000339987 CCND1P24385 295 aa17.31■□□□□ 0.36
SDCBP2-201ENST00000339987 ALDH3A1P30838 453 aa17.31■□□□□ 0.36
SDCBP2-201ENST00000339987 DAB2P98082 770 aa17.31■□□□□ 0.36
SDCBP2-201ENST00000339987 ASPHQ12797 758 aa17.31■□□□□ 0.36
SDCBP2-201ENST00000339987 PCBP2Q15366 365 aaKnown RBP eCLIP17.31■□□□□ 0.36
SDCBP2-201ENST00000339987 KLHL35Q6PF15 583 aa17.31■□□□□ 0.36
SDCBP2-201ENST00000339987 ZNF761Q86XN6 746 aaPredicted RBP17.31■□□□□ 0.36
SDCBP2-201ENST00000339987 LINC01555Q8NAE3 123 aa17.31■□□□□ 0.36
SDCBP2-201ENST00000339987 BAHD1Q8TBE0 780 aaPredicted RBP17.31■□□□□ 0.36
SDCBP2-201ENST00000339987 MDM1Q8TC05 714 aa17.31■□□□□ 0.36
SDCBP2-201ENST00000339987 MGARPQ8TDB4 240 aa17.31■□□□□ 0.36
SDCBP2-201ENST00000339987 JPH3Q8WXH2 748 aaPredicted RBP17.31■□□□□ 0.36
SDCBP2-201ENST00000339987 CCDC74AQ96AQ1 378 aa17.31■□□□□ 0.36
SDCBP2-201ENST00000339987 PHF21BQ96EK2 531 aa17.31■□□□□ 0.36
SDCBP2-201ENST00000339987 L3HYPDHQ96EM0 354 aa17.31■□□□□ 0.36
SDCBP2-201ENST00000339987 NRTNQ99748 197 aa17.31■□□□□ 0.36
SDCBP2-201ENST00000339987 SGPP1Q9BX95 441 aa17.31■□□□□ 0.36
SDCBP2-201ENST00000339987 C1QTNF3Q9BXJ4 246 aa17.31■□□□□ 0.36
SDCBP2-201ENST00000339987 ATG10Q9H0Y0 220 aa17.31■□□□□ 0.36
SDCBP2-201ENST00000339987 FTSJ1Q9UET6 329 aa17.31■□□□□ 0.36
SDCBP2-201ENST00000339987 ZW10O43264 779 aa17.3■□□□□ 0.36
SDCBP2-201ENST00000339987 TRIM13O60858 407 aa17.3■□□□□ 0.36
SDCBP2-201ENST00000339987 CBFA2T3O75081 653 aa17.3■□□□□ 0.36
SDCBP2-201ENST00000339987 STK16O75716 305 aa17.3■□□□□ 0.36
SDCBP2-201ENST00000339987 CHN1P15882 459 aa17.3■□□□□ 0.36
SDCBP2-201ENST00000339987 CKMT2P17540 419 aa17.3■□□□□ 0.36
SDCBP2-201ENST00000339987 IMPDH1P20839 514 aa17.3■□□□□ 0.36
SDCBP2-201ENST00000339987 KCNA4P22459 653 aa17.3■□□□□ 0.36
SDCBP2-201ENST00000339987 HSPA7P48741 367 aa17.3■□□□□ 0.36
SDCBP2-201ENST00000339987 AGTR2P50052 363 aa17.3■□□□□ 0.36
SDCBP2-201ENST00000339987 HERVK_113P63132 956 aa17.3■□□□□ 0.36
SDCBP2-201ENST00000339987 NAE1Q13564 534 aa17.3■□□□□ 0.36
SDCBP2-201ENST00000339987 FASTKQ14296 549 aaKnown RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms