RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 ALDH3B2P48448 385 aa12.61□□□□□ -0.39
USP47-202ENST00000339865 KLF1Q13351 362 aaPredicted RBP12.61□□□□□ -0.39
USP47-202ENST00000339865 BCL2A1Q16548 175 aa12.61□□□□□ -0.39
USP47-202ENST00000339865 MOB2Q70IA6 237 aa12.61□□□□□ -0.39
USP47-202ENST00000339865 OR6K2Q8NGY2 324 aa12.61□□□□□ -0.39
USP47-202ENST00000339865 FCAMRQ8WWV6 532 aa12.61□□□□□ -0.39
USP47-202ENST00000339865 PPP1R14DQ9NXH3 145 aa12.61□□□□□ -0.39
USP47-202ENST00000339865 PLLPQ9Y342 182 aa12.61□□□□□ -0.39
USP47-202ENST00000339865 TLL2Q9Y6L7 1015 aa12.61□□□□□ -0.39
USP47-202ENST00000339865 ZNF136P52737 540 aa12.6□□□□□ -0.39
USP47-202ENST00000339865 ATP6V0D1P61421 351 aa12.6□□□□□ -0.39
USP47-202ENST00000339865 PLPP4Q5VZY2 271 aa12.6□□□□□ -0.39
USP47-202ENST00000339865 CAPN13Q6MZZ7 669 aaPredicted RBP12.6□□□□□ -0.39
USP47-202ENST00000339865 RAVER1Q8IY67 606 aaKnown RBP12.6□□□□□ -0.39
USP47-202ENST00000339865 ZNF347Q96SE7 839 aa12.6□□□□□ -0.39
USP47-202ENST00000339865 DUSP16Q9BY84 665 aa12.6□□□□□ -0.39
USP47-202ENST00000339865 TPT1P8Q9HAU6 139 aa12.6□□□□□ -0.39
USP47-202ENST00000339865 PCDHGB2Q9Y5G2 931 aa12.6□□□□□ -0.39
USP47-202ENST00000339865 C1QTNF3-AMACRE9PGA6 284 aa12.6□□□□□ -0.39
USP47-202ENST00000339865 BCKDHAP12694 445 aa12.6□□□□□ -0.39
USP47-202ENST00000339865 TNFRSF8P28908 595 aa12.6□□□□□ -0.39
USP47-202ENST00000339865 UBE2UQ5VVX9 321 aa12.6□□□□□ -0.39
USP47-202ENST00000339865 MARCH9Q86YJ5 346 aa12.6□□□□□ -0.39
USP47-202ENST00000339865 BORCS7Q96B45 105 aa12.6□□□□□ -0.39
USP47-202ENST00000339865 PTPN18Q99952 460 aa12.6□□□□□ -0.39
USP47-202ENST00000339865 CORO1BQ9BR76 489 aa12.6□□□□□ -0.39
USP47-202ENST00000339865 HMX3A6NHT5 357 aa12.6□□□□□ -0.39
USP47-202ENST00000339865 LACTBL1A8MY62 500 aa12.6□□□□□ -0.39
USP47-202ENST00000339865 ARP10275 920 aa12.6□□□□□ -0.39
USP47-202ENST00000339865 RNF19AQ9NV58 838 aa12.6□□□□□ -0.39
USP47-202ENST00000339865 GNG8Q9UK08 70 aa12.6□□□□□ -0.39
USP47-202ENST00000339865 FBP2O00757 339 aa12.6□□□□□ -0.39
USP47-202ENST00000339865 FAM155BO75949 473 aa12.6□□□□□ -0.39
USP47-202ENST00000339865 SLC34A2O95436 690 aa12.6□□□□□ -0.39
USP47-202ENST00000339865 CTDNEP1O95476 244 aa12.6□□□□□ -0.39
USP47-202ENST00000339865 CCND3P30281 292 aaPredicted RBP12.6□□□□□ -0.39
USP47-202ENST00000339865 KHDC1Q4VXA5 237 aaKnown RBP12.6□□□□□ -0.39
USP47-202ENST00000339865 DPY19L4Q7Z388 723 aa12.6□□□□□ -0.39
USP47-202ENST00000339865 SLC9B2Q86UD5 537 aa12.6□□□□□ -0.39
USP47-202ENST00000339865 SLC6A7Q99884 636 aa12.6□□□□□ -0.39
USP47-202ENST00000339865 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.6□□□□□ -0.39
USP47-202ENST00000339865 ZNF446Q9NWS9 450 aa12.6□□□□□ -0.39
USP47-202ENST00000339865 ILVBLA1L0T0 632 aa12.6□□□□□ -0.39
USP47-202ENST00000339865 SLC9A3R1O14745 358 aaPredicted RBP12.6□□□□□ -0.39
USP47-202ENST00000339865 CASC3O15234 703 aaKnown RBP12.6□□□□□ -0.39
USP47-202ENST00000339865 LILRB5O75023 590 aa12.6□□□□□ -0.39
USP47-202ENST00000339865 TRUB2O95900 331 aaKnown RBP12.6□□□□□ -0.39
USP47-202ENST00000339865 GNRH1P01148 92 aa12.6□□□□□ -0.39
USP47-202ENST00000339865 ADH6P28332 368 aa12.6□□□□□ -0.39
USP47-202ENST00000339865 ADGRE1Q14246 886 aa12.6□□□□□ -0.39
USP47-202ENST00000339865 HEPACAMQ14CZ8 416 aa12.6□□□□□ -0.39
USP47-202ENST00000339865 LIX1Q8N485 282 aa12.6□□□□□ -0.39
USP47-202ENST00000339865 ARNTL2Q8WYA1 636 aa12.6□□□□□ -0.39
USP47-202ENST00000339865 SLC41A3Q96GZ6 507 aa12.6□□□□□ -0.39
USP47-202ENST00000339865 PWWP2AQ96N64 755 aa12.6□□□□□ -0.39
USP47-202ENST00000339865 DENND2DQ9H6A0 471 aaPredicted RBP12.6□□□□□ -0.39
USP47-202ENST00000339865 PPP4R1LQ9P1A2 415 aa12.6□□□□□ -0.39
USP47-202ENST00000339865 RPL36Q9Y3U8 105 aaKnown RBP12.6□□□□□ -0.39
USP47-202ENST00000339865 FAM227AF5H4B4 570 aa12.6□□□□□ -0.39
USP47-202ENST00000339865 SNAPC5O75971 98 aa12.6□□□□□ -0.39
USP47-202ENST00000339865 DCBLD2Q96PD2 775 aa12.6□□□□□ -0.39
USP47-202ENST00000339865 ULBP1Q9BZM6 244 aa12.6□□□□□ -0.39
USP47-202ENST00000339865 TIGARQ9NQ88 270 aa12.6□□□□□ -0.39
USP47-202ENST00000339865 MYO5CQ9NQX4 1742 aa12.59□□□□□ -0.39
USP47-202ENST00000339865 SLC7A1P30825 629 aa12.59□□□□□ -0.39
USP47-202ENST00000339865 TRIM28Q13263 835 aaKnown RBP12.59□□□□□ -0.39
USP47-202ENST00000339865 NAT16Q8N8M0 369 aa12.59□□□□□ -0.39
USP47-202ENST00000339865 KIAA0895Q8NCT3 520 aa12.59□□□□□ -0.39
USP47-202ENST00000339865 SLC25A36Q96CQ1 311 aa12.59□□□□□ -0.39
USP47-202ENST00000339865 ZNF670Q9BS34 389 aa12.59□□□□□ -0.39
USP47-202ENST00000339865 RTFDC1Q9BY42 306 aaPredicted RBP12.59□□□□□ -0.39
USP47-202ENST00000339865 KBTBD4Q9NVX7 518 aa12.59□□□□□ -0.39
USP47-202ENST00000339865 CLUHO75153 1309 aa12.59□□□□□ -0.39
USP47-202ENST00000339865 COL15A1P39059 1388 aa12.59□□□□□ -0.39
USP47-202ENST00000339865 RHPN2P1A8MT19 583 aa12.59□□□□□ -0.39
USP47-202ENST00000339865 CYP11A1P05108 521 aa12.59□□□□□ -0.39
USP47-202ENST00000339865 GNSP15586 552 aa12.59□□□□□ -0.39
USP47-202ENST00000339865 CRHR1P34998 444 aa12.59□□□□□ -0.39
USP47-202ENST00000339865 TEAD4Q15561 434 aa12.59□□□□□ -0.39
USP47-202ENST00000339865 PAMR1Q6UXH9 720 aa12.59□□□□□ -0.39
USP47-202ENST00000339865 PCDHGB1Q9Y5G3 927 aa12.59□□□□□ -0.39
USP47-202ENST00000339865 LRRC72A6NJI9 287 aa12.59□□□□□ -0.39
USP47-202ENST00000339865 OR2B3O76000 313 aa12.59□□□□□ -0.39
USP47-202ENST00000339865 BPGMP07738 259 aa12.59□□□□□ -0.39
USP47-202ENST00000339865 DHPSP49366 369 aaPredicted RBP12.59□□□□□ -0.39
USP47-202ENST00000339865 ZNF460Q14592 562 aa12.59□□□□□ -0.39
USP47-202ENST00000339865 SGCBQ16585 318 aa12.59□□□□□ -0.39
USP47-202ENST00000339865 TSTQ16762 297 aaKnown RBP12.59□□□□□ -0.39
USP47-202ENST00000339865 HCAR2Q8TDS4 363 aa12.59□□□□□ -0.39
USP47-202ENST00000339865 WNT8BQ93098 351 aa12.59□□□□□ -0.39
USP47-202ENST00000339865 SETD4Q9NVD3 440 aa12.59□□□□□ -0.39
USP47-202ENST00000339865 GPATCH2Q9NW75 528 aa12.59□□□□□ -0.39
USP47-202ENST00000339865 OTOFQ9HC10 1997 aa12.59□□□□□ -0.39
USP47-202ENST00000339865 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.59□□□□□ -0.39
USP47-202ENST00000339865 TCAF2A6NFQ2 919 aa12.59□□□□□ -0.39
USP47-202ENST00000339865 TNFSF12O43508 249 aa12.59□□□□□ -0.39
USP47-202ENST00000339865 CALCAP01258 141 aa12.59□□□□□ -0.39
USP47-202ENST00000339865 ICAM1P05362 532 aa12.59□□□□□ -0.39
USP47-202ENST00000339865 NINJ1Q92982 152 aa12.59□□□□□ -0.39
USP47-202ENST00000339865 TMEM41AQ96HV5 264 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms