RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 SNAP29O95721 258 aa14.48□□□□□ -0.09
CLCNKA-201ENST00000331433 MPC1LP0DKB6 136 aa14.48□□□□□ -0.09
CLCNKA-201ENST00000331433 TIMP2P16035 220 aa14.48□□□□□ -0.09
CLCNKA-201ENST00000331433 EPCAMP16422 314 aa14.48□□□□□ -0.09
CLCNKA-201ENST00000331433 ZNF30P17039 623 aa14.48□□□□□ -0.09
CLCNKA-201ENST00000331433 CYP2A7P20853 494 aa14.48□□□□□ -0.09
CLCNKA-201ENST00000331433 MYF6P23409 242 aa14.48□□□□□ -0.09
CLCNKA-201ENST00000331433 CTNNB1P35222 781 aa14.48□□□□□ -0.09
CLCNKA-201ENST00000331433 RPS9P46781 194 aaKnown RBP14.48□□□□□ -0.09
CLCNKA-201ENST00000331433 OTUD3Q5T2D3 398 aaPredicted RBP14.48□□□□□ -0.09
CLCNKA-201ENST00000331433 ENPP6Q6UWR7 440 aa14.48□□□□□ -0.09
CLCNKA-201ENST00000331433 ZNF786Q8N393 782 aa14.48□□□□□ -0.09
CLCNKA-201ENST00000331433 TCAIMQ8N3R3 496 aa14.48□□□□□ -0.09
CLCNKA-201ENST00000331433 POF1BQ8WVV4 589 aa14.48□□□□□ -0.09
CLCNKA-201ENST00000331433 TMIGD2Q96BF3 282 aa14.48□□□□□ -0.09
CLCNKA-201ENST00000331433 APIPQ96GX9 242 aa14.48□□□□□ -0.09
CLCNKA-201ENST00000331433 CLK4Q9HAZ1 481 aaKnown RBP14.48□□□□□ -0.09
CLCNKA-201ENST00000331433 NTN4Q9HB63 628 aa14.48□□□□□ -0.09
CLCNKA-201ENST00000331433 IL23AQ9NPF7 189 aa14.48□□□□□ -0.09
CLCNKA-201ENST00000331433 SNX6Q9UNH7 406 aa14.48□□□□□ -0.09
CLCNKA-201ENST00000331433 A0A1W2PQ67 120 aa14.47□□□□□ -0.09
CLCNKA-201ENST00000331433 UPK3BL1B0FP48 263 aa14.47□□□□□ -0.09
CLCNKA-201ENST00000331433 CFAP99D6REC4 459 aa14.47□□□□□ -0.09
CLCNKA-201ENST00000331433 UPK3BL2E5RIL1 263 aa14.47□□□□□ -0.09
CLCNKA-201ENST00000331433 CLGNO14967 610 aa14.47□□□□□ -0.09
CLCNKA-201ENST00000331433 CLOCKO15516 846 aa14.47□□□□□ -0.09
CLCNKA-201ENST00000331433 GMNNO75496 209 aa14.47□□□□□ -0.09
CLCNKA-201ENST00000331433 GSNP06396 782 aa14.47□□□□□ -0.09
CLCNKA-201ENST00000331433 DDX6P26196 483 aaKnown RBP eCLIP14.47□□□□□ -0.09
CLCNKA-201ENST00000331433 HALP42357 657 aa14.47□□□□□ -0.09
CLCNKA-201ENST00000331433 HNMTP50135 292 aa14.47□□□□□ -0.09
CLCNKA-201ENST00000331433 GCNT7Q6ZNI0 430 aa14.47□□□□□ -0.09
CLCNKA-201ENST00000331433 C10orf111Q8N326 155 aa14.47□□□□□ -0.09
CLCNKA-201ENST00000331433 LILRA3Q8N6C8 439 aaPredicted RBP14.47□□□□□ -0.09
CLCNKA-201ENST00000331433 MCOLN3Q8TDD5 553 aa14.47□□□□□ -0.09
CLCNKA-201ENST00000331433 GFM2Q969S9 779 aaKnown RBP14.47□□□□□ -0.09
CLCNKA-201ENST00000331433 EGLN2Q96KS0 407 aa14.47□□□□□ -0.09
CLCNKA-201ENST00000331433 HAUS8Q9BT25 410 aa14.47□□□□□ -0.09
CLCNKA-201ENST00000331433 BDH2Q9BUT1 245 aa14.47□□□□□ -0.09
CLCNKA-201ENST00000331433 HPS4Q9NQG7 708 aa14.47□□□□□ -0.09
CLCNKA-201ENST00000331433 SMPD3Q9NY59 655 aaPredicted RBP14.47□□□□□ -0.09
CLCNKA-201ENST00000331433 INSL6Q9Y581 213 aa14.47□□□□□ -0.09
CLCNKA-201ENST00000331433 PCDHB14Q9Y5E9 798 aa14.47□□□□□ -0.09
CLCNKA-201ENST00000331433 MAGED1Q9Y5V3 778 aaPredicted RBP14.47□□□□□ -0.09
CLCNKA-201ENST00000331433 CHD9Q3L8U1 2897 aa14.47□□□□□ -0.09
CLCNKA-201ENST00000331433 H3BSA7 217 aa14.47□□□□□ -0.09
CLCNKA-201ENST00000331433 SDC1P18827 310 aa14.47□□□□□ -0.09
CLCNKA-201ENST00000331433 CTSCP53634 463 aa14.47□□□□□ -0.09
CLCNKA-201ENST00000331433 ABRQ12979 859 aa14.47□□□□□ -0.09
CLCNKA-201ENST00000331433 DMC1Q14565 340 aa14.47□□□□□ -0.09
CLCNKA-201ENST00000331433 NKG7Q16617 165 aa14.47□□□□□ -0.09
CLCNKA-201ENST00000331433 GGTA1PQ4G0N0 100 aa14.47□□□□□ -0.09
CLCNKA-201ENST00000331433 CYBRD1Q53TN4 286 aa14.47□□□□□ -0.09
CLCNKA-201ENST00000331433 RUNDC3AQ59EK9 446 aa14.47□□□□□ -0.09
CLCNKA-201ENST00000331433 TTC33Q6PID6 262 aaPredicted RBP14.47□□□□□ -0.09
CLCNKA-201ENST00000331433 GRASPQ7Z6J2 395 aaPredicted RBP14.47□□□□□ -0.09
CLCNKA-201ENST00000331433 L3MBTL4Q8NA19 623 aa14.47□□□□□ -0.09
CLCNKA-201ENST00000331433 APOLD1Q96LR9 279 aa14.47□□□□□ -0.09
CLCNKA-201ENST00000331433 CCDC115Q96NT0 180 aa14.47□□□□□ -0.09
CLCNKA-201ENST00000331433 INPP5KQ9BT40 448 aa14.47□□□□□ -0.09
CLCNKA-201ENST00000331433 DNAJC11Q9NVH1 559 aa14.47□□□□□ -0.09
CLCNKA-201ENST00000331433 UTS2RQ9UKP6 389 aa14.47□□□□□ -0.09
CLCNKA-201ENST00000331433 INVSQ9Y283 1065 aa14.47□□□□□ -0.09
CLCNKA-201ENST00000331433 ITM2BQ9Y287 266 aa14.47□□□□□ -0.09
CLCNKA-201ENST00000331433 FADS3Q9Y5Q0 445 aa14.47□□□□□ -0.09
CLCNKA-201ENST00000331433 UPK1AO00322 258 aa14.46□□□□□ -0.09
CLCNKA-201ENST00000331433 TULP3O75386 442 aa14.46□□□□□ -0.09
CLCNKA-201ENST00000331433 RAP2AP10114 183 aa14.46□□□□□ -0.09
CLCNKA-201ENST00000331433 IRS1P35568 1242 aa14.46□□□□□ -0.09
CLCNKA-201ENST00000331433 PREPP48147 710 aa14.46□□□□□ -0.09
CLCNKA-201ENST00000331433 PFN3P60673 137 aa14.46□□□□□ -0.09
CLCNKA-201ENST00000331433 CHIT1Q13231 466 aa14.46□□□□□ -0.09
CLCNKA-201ENST00000331433 SP140Q13342 867 aa14.46□□□□□ -0.09
CLCNKA-201ENST00000331433 LSAMPQ13449 338 aa14.46□□□□□ -0.09
CLCNKA-201ENST00000331433 FAM98BQ52LJ0 330 aaKnown RBP14.46□□□□□ -0.09
CLCNKA-201ENST00000331433 HENMT1Q5T8I9 393 aaKnown RBP14.46□□□□□ -0.09
CLCNKA-201ENST00000331433 TTC23LQ6PF05 361 aa14.46□□□□□ -0.09
CLCNKA-201ENST00000331433 CYP2U1Q7Z449 544 aa14.46□□□□□ -0.09
CLCNKA-201ENST00000331433 ASZ1Q8WWH4 475 aa14.46□□□□□ -0.09
CLCNKA-201ENST00000331433 PAIP1Q9H074 479 aaKnown RBP14.46□□□□□ -0.09
CLCNKA-201ENST00000331433 SERHLQ9NQF3 203 aa14.46□□□□□ -0.09
CLCNKA-201ENST00000331433 TBC1D14Q9P2M4 693 aa14.46□□□□□ -0.09
CLCNKA-201ENST00000331433 LIMD1Q9UGP4 676 aa14.46□□□□□ -0.09
CLCNKA-201ENST00000331433 ADGRE2Q9UHX3 823 aa14.46□□□□□ -0.09
CLCNKA-201ENST00000331433 ZNF639Q9UID6 485 aa14.46□□□□□ -0.09
CLCNKA-201ENST00000331433 PPT2Q9UMR5 302 aa14.46□□□□□ -0.09
CLCNKA-201ENST00000331433 DMTF1Q9Y222 760 aa14.46□□□□□ -0.09
CLCNKA-201ENST00000331433 PLXNA2O75051 1894 aa14.46□□□□□ -0.1
CLCNKA-201ENST00000331433 TRBV5-3A0A0A0MS03 114 aa14.46□□□□□ -0.1
CLCNKA-201ENST00000331433 ARHGEF33A8MVX0 844 aa14.46□□□□□ -0.1
CLCNKA-201ENST00000331433 TSPAN6O43657 245 aa14.46□□□□□ -0.1
CLCNKA-201ENST00000331433 SYN1P17600 705 aa14.46□□□□□ -0.1
CLCNKA-201ENST00000331433 XPAP23025 273 aaPredicted RBP14.46□□□□□ -0.1
CLCNKA-201ENST00000331433 S100A3P33764 101 aa14.46□□□□□ -0.1
CLCNKA-201ENST00000331433 NNMTP40261 264 aa14.46□□□□□ -0.1
CLCNKA-201ENST00000331433 GJA8P48165 433 aa14.46□□□□□ -0.1
CLCNKA-201ENST00000331433 CLDN8P56748 225 aa14.46□□□□□ -0.1
CLCNKA-201ENST00000331433 CHRNB3Q05901 458 aa14.46□□□□□ -0.1
CLCNKA-201ENST00000331433 GRIN2CQ14957 1233 aa14.46□□□□□ -0.1
CLCNKA-201ENST00000331433 ADRM1Q16186 407 aa14.46□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms