RNA–Protein interactions for RNA: ENST00000329970.7

GTF3C6-201, Transcript of general transcription factor IIIC subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C6, Length 952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C6-201ENST00000329970 COL12A1Q99715 3063 aa13.08□□□□□ -0.32
GTF3C6-201ENST00000329970 USP9XQ93008 2570 aaPredicted RBP13.07□□□□□ -0.32
GTF3C6-201ENST00000329970 IQCF5A8MTL0 148 aa13.07□□□□□ -0.32
GTF3C6-201ENST00000329970 ISM1B1AKI9 464 aa13.07□□□□□ -0.32
GTF3C6-201ENST00000329970 RASGRF2O14827 1237 aa13.07□□□□□ -0.32
GTF3C6-201ENST00000329970 HCRTR1O43613 425 aa13.07□□□□□ -0.32
GTF3C6-201ENST00000329970 PRICKLE3O43900 615 aaPredicted RBP13.07□□□□□ -0.32
GTF3C6-201ENST00000329970 IGHEP01854 428 aa13.07□□□□□ -0.32
GTF3C6-201ENST00000329970 ARNTP27540 789 aa13.07□□□□□ -0.32
GTF3C6-201ENST00000329970 ATP5DP30049 168 aa13.07□□□□□ -0.32
GTF3C6-201ENST00000329970 SESN2P58004 480 aaPredicted RBP13.07□□□□□ -0.32
GTF3C6-201ENST00000329970 DCDP81605 110 aaKnown RBP13.07□□□□□ -0.32
GTF3C6-201ENST00000329970 GBX1Q14549 363 aa13.07□□□□□ -0.32
GTF3C6-201ENST00000329970 RNF187Q5TA31 235 aaPredicted RBP13.07□□□□□ -0.32
GTF3C6-201ENST00000329970 MRPL14Q6P1L8 145 aaKnown RBP13.07□□□□□ -0.32
GTF3C6-201ENST00000329970 HMGCLL1Q8TB92 370 aa13.07□□□□□ -0.32
GTF3C6-201ENST00000329970 RAD51AP1Q96B01 352 aa13.07□□□□□ -0.32
GTF3C6-201ENST00000329970 TCF12Q99081 682 aa13.07□□□□□ -0.32
GTF3C6-201ENST00000329970 INTS7Q9NVH2 962 aaKnown RBP13.07□□□□□ -0.32
GTF3C6-201ENST00000329970 PLAGL1Q9UM63 463 aa13.07□□□□□ -0.32
GTF3C6-201ENST00000329970 SOX13Q9UN79 622 aa13.07□□□□□ -0.32
GTF3C6-201ENST00000329970 G3BP2Q9UN86 482 aaKnown RBP13.07□□□□□ -0.32
GTF3C6-201ENST00000329970 KLK4Q9Y5K2 254 aa13.07□□□□□ -0.32
GTF3C6-201ENST00000329970 ESPL1Q14674 2120 aa13.07□□□□□ -0.32
GTF3C6-201ENST00000329970 MAST4O15021 2626 aa13.07□□□□□ -0.32
GTF3C6-201ENST00000329970 NAV2Q8IVL1 2488 aa13.06□□□□□ -0.32
GTF3C6-201ENST00000329970 TARM1B6A8C7 271 aa13.06□□□□□ -0.32
GTF3C6-201ENST00000329970 H3BMM5 538 aa13.06□□□□□ -0.32
GTF3C6-201ENST00000329970 PFDN6O15212 129 aa13.06□□□□□ -0.32
GTF3C6-201ENST00000329970 CBSLP0DN79 551 aa13.06□□□□□ -0.32
GTF3C6-201ENST00000329970 MAGP20916 626 aa13.06□□□□□ -0.32
GTF3C6-201ENST00000329970 NMBRP28336 390 aa13.06□□□□□ -0.32
GTF3C6-201ENST00000329970 CBSP35520 551 aa13.06□□□□□ -0.32
GTF3C6-201ENST00000329970 CCNFP41002 786 aa13.06□□□□□ -0.32
GTF3C6-201ENST00000329970 CCL11P51671 97 aa13.06□□□□□ -0.32
GTF3C6-201ENST00000329970 ARSFP54793 590 aa13.06□□□□□ -0.32
GTF3C6-201ENST00000329970 SARNPP82979 210 aaKnown RBP13.06□□□□□ -0.32
GTF3C6-201ENST00000329970 KCNJ11Q14654 390 aa13.06□□□□□ -0.32
GTF3C6-201ENST00000329970 IGFBP7Q16270 282 aa13.06□□□□□ -0.32
GTF3C6-201ENST00000329970 DEFB110Q30KQ9 67 aa13.06□□□□□ -0.32
GTF3C6-201ENST00000329970 ZC3H12BQ5HYM0 836 aaKnown RBP13.06□□□□□ -0.32
GTF3C6-201ENST00000329970 COLEC12Q5KU26 742 aa13.06□□□□□ -0.32
GTF3C6-201ENST00000329970 YOD1Q5VVQ6 348 aaPredicted RBP13.06□□□□□ -0.32
GTF3C6-201ENST00000329970 PTRHD1Q6GMV3 140 aaKnown RBP13.06□□□□□ -0.32
GTF3C6-201ENST00000329970 KIAA0930Q6ICG6 404 aaPredicted RBP13.06□□□□□ -0.32
GTF3C6-201ENST00000329970 MRNIPQ6NTE8 343 aa13.06□□□□□ -0.32
GTF3C6-201ENST00000329970 TTC23LQ6PF05 361 aa13.06□□□□□ -0.32
GTF3C6-201ENST00000329970 GSTA5Q7RTV2 222 aa13.06□□□□□ -0.32
GTF3C6-201ENST00000329970 LDB1Q86U70 411 aaPredicted RBP13.06□□□□□ -0.32
GTF3C6-201ENST00000329970 KRT222Q8N1A0 295 aa13.06□□□□□ -0.32
GTF3C6-201ENST00000329970 OR2Y1Q8NGV0 311 aa13.06□□□□□ -0.32
GTF3C6-201ENST00000329970 DLG3Q92796 817 aa13.06□□□□□ -0.32
GTF3C6-201ENST00000329970 ZUFSPQ96AP4 578 aa13.06□□□□□ -0.32
GTF3C6-201ENST00000329970 ZNF285Q96NJ3 590 aa13.06□□□□□ -0.32
GTF3C6-201ENST00000329970 BIRC8Q96P09 236 aa13.06□□□□□ -0.32
GTF3C6-201ENST00000329970 SMAD5Q99717 465 aaKnown RBP13.06□□□□□ -0.32
GTF3C6-201ENST00000329970 SPRTNQ9H040 489 aaPredicted RBP13.06□□□□□ -0.32
GTF3C6-201ENST00000329970 EURLQ9NYK6 297 aa13.06□□□□□ -0.32
GTF3C6-201ENST00000329970 C5AR2Q9P296 337 aa13.06□□□□□ -0.32
GTF3C6-201ENST00000329970 KLHL41O60662 606 aa13.05□□□□□ -0.32
GTF3C6-201ENST00000329970 DPM1O60762 260 aa13.05□□□□□ -0.32
GTF3C6-201ENST00000329970 NDUFS3O75489 264 aa13.05□□□□□ -0.32
GTF3C6-201ENST00000329970 SORBS2O94875 1100 aaKnown RBP13.05□□□□□ -0.32
GTF3C6-201ENST00000329970 C1orf105O95561 183 aa13.05□□□□□ -0.32
GTF3C6-201ENST00000329970 ESR1P03372 595 aa13.05□□□□□ -0.32
GTF3C6-201ENST00000329970 MLNP12872 115 aa13.05□□□□□ -0.32
GTF3C6-201ENST00000329970 OGNP20774 298 aaKnown RBP13.05□□□□□ -0.32
GTF3C6-201ENST00000329970 MGAT1P26572 445 aa13.05□□□□□ -0.32
GTF3C6-201ENST00000329970 KCNJ1P48048 391 aa13.05□□□□□ -0.32
GTF3C6-201ENST00000329970 CSE1LP55060 971 aaKnown RBP13.05□□□□□ -0.32
GTF3C6-201ENST00000329970 CRADDP78560 199 aa13.05□□□□□ -0.32
GTF3C6-201ENST00000329970 CCZ1BP86790 482 aa13.05□□□□□ -0.32
GTF3C6-201ENST00000329970 CCZ1P86791 482 aaPredicted RBP13.05□□□□□ -0.32
GTF3C6-201ENST00000329970 CHAF1BQ13112 559 aa13.05□□□□□ -0.32
GTF3C6-201ENST00000329970 UBAP2LQ14157 1087 aaKnown RBP13.05□□□□□ -0.32
GTF3C6-201ENST00000329970 TCTE1Q5JU00 501 aa13.05□□□□□ -0.32
GTF3C6-201ENST00000329970 CTSL3PQ5NE16 218 aa13.05□□□□□ -0.32
GTF3C6-201ENST00000329970 OTOAQ7RTW8 1153 aa13.05□□□□□ -0.32
GTF3C6-201ENST00000329970 SDCCAG8Q86SQ7 713 aaPredicted RBP13.05□□□□□ -0.32
GTF3C6-201ENST00000329970 ATCAYQ86WG3 371 aa13.05□□□□□ -0.32
GTF3C6-201ENST00000329970 RASGEF1CQ8N431 466 aa13.05□□□□□ -0.32
GTF3C6-201ENST00000329970 RAB42Q8N4Z0 105 aa13.05□□□□□ -0.32
GTF3C6-201ENST00000329970 ZNF655Q8N720 491 aaPredicted RBP13.05□□□□□ -0.32
GTF3C6-201ENST00000329970 PRELID2Q8N945 189 aa13.05□□□□□ -0.32
GTF3C6-201ENST00000329970 GSDMBQ8TAX9 411 aa13.05□□□□□ -0.32
GTF3C6-201ENST00000329970 MAGEC3Q8TD91 643 aa13.05□□□□□ -0.32
GTF3C6-201ENST00000329970 LPGAT1Q92604 370 aa13.05□□□□□ -0.32
GTF3C6-201ENST00000329970 FKBP10Q96AY3 582 aa13.05□□□□□ -0.32
GTF3C6-201ENST00000329970 MFSD3Q96ES6 412 aa13.05□□□□□ -0.32
GTF3C6-201ENST00000329970 FER1L6-AS2Q96M78 137 aa13.05□□□□□ -0.32
GTF3C6-201ENST00000329970 NDC1Q9BTX1 674 aa13.05□□□□□ -0.32
GTF3C6-201ENST00000329970 TXLNGQ9NUQ3 528 aa13.05□□□□□ -0.32
GTF3C6-201ENST00000329970 SYBUQ9NX95 663 aa13.05□□□□□ -0.32
GTF3C6-201ENST00000329970 SPATA7Q9P0W8 599 aa13.05□□□□□ -0.32
GTF3C6-201ENST00000329970 NDOR1Q9UHB4 597 aa13.05□□□□□ -0.32
GTF3C6-201ENST00000329970 GPN3Q9UHW5 284 aaPredicted RBP13.05□□□□□ -0.32
GTF3C6-201ENST00000329970 TTC7AQ9ULT0 858 aaPredicted RBP13.05□□□□□ -0.32
GTF3C6-201ENST00000329970 USP9YO00507 2555 aaPredicted RBP13.05□□□□□ -0.32
GTF3C6-201ENST00000329970 SPTBN1Q01082 2364 aaKnown RBP13.05□□□□□ -0.32
GTF3C6-201ENST00000329970 SPTAN1Q13813 2472 aaKnown RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms