RNA–Protein interactions for RNA: ENST00000328596.10

TNFRSF18-201, Transcript of TNF receptor superfamily member 18, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TNFRSF18, Length 851 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF18-201ENST00000328596 MATN4O95460 622 aa20.21■□□□□ 0.83
TNFRSF18-201ENST00000328596 CTAGE8P0CG41 777 aa20.21■□□□□ 0.83
TNFRSF18-201ENST00000328596 TCN2P20062 427 aa20.21■□□□□ 0.83
TNFRSF18-201ENST00000328596 BDKRB1P46663 353 aa20.21■□□□□ 0.83
TNFRSF18-201ENST00000328596 RPL21P46778 160 aaKnown RBP20.21■□□□□ 0.83
TNFRSF18-201ENST00000328596 CLCN7P51798 805 aa20.21■□□□□ 0.83
TNFRSF18-201ENST00000328596 ITGA8P53708 1063 aa20.21■□□□□ 0.83
TNFRSF18-201ENST00000328596 ZIC1Q15915 447 aa20.21■□□□□ 0.83
TNFRSF18-201ENST00000328596 BBS9Q3SYG4 887 aa20.21■□□□□ 0.83
TNFRSF18-201ENST00000328596 CRTC2Q53ET0 693 aaPredicted RBP20.21■□□□□ 0.83
TNFRSF18-201ENST00000328596 SPANXN3Q5MJ09 141 aa20.21■□□□□ 0.83
TNFRSF18-201ENST00000328596 CNSTQ6PJW8 725 aa20.21■□□□□ 0.83
TNFRSF18-201ENST00000328596 CTAGE6Q86UF2 777 aa20.21■□□□□ 0.83
TNFRSF18-201ENST00000328596 CTAGE4Q8IX94 777 aa20.21■□□□□ 0.83
TNFRSF18-201ENST00000328596 PDIK1LQ8N165 341 aa20.21■□□□□ 0.83
TNFRSF18-201ENST00000328596 MAGEC3Q8TD91 643 aa20.21■□□□□ 0.83
TNFRSF18-201ENST00000328596 SLC22A18Q96BI1 424 aa20.21■□□□□ 0.83
TNFRSF18-201ENST00000328596 CATSPER2Q96P56 530 aa20.21■□□□□ 0.83
TNFRSF18-201ENST00000328596 ARHGAP9Q9BRR9 750 aa20.21■□□□□ 0.83
TNFRSF18-201ENST00000328596 RAB17Q9H0T7 212 aa20.21■□□□□ 0.83
TNFRSF18-201ENST00000328596 FAM60AQ9NP50 221 aa20.21■□□□□ 0.83
TNFRSF18-201ENST00000328596 IARS2Q9NSE4 1012 aaKnown RBP20.21■□□□□ 0.83
TNFRSF18-201ENST00000328596 KLHL42Q9P2K6 505 aa20.21■□□□□ 0.83
TNFRSF18-201ENST00000328596 SNX24Q9Y343 169 aa20.21■□□□□ 0.83
TNFRSF18-201ENST00000328596 UTP11Q9Y3A2 253 aaKnown RBP20.21■□□□□ 0.83
TNFRSF18-201ENST00000328596 MRPS18BQ9Y676 258 aaKnown RBP20.21■□□□□ 0.83
TNFRSF18-201ENST00000328596 COMMD10Q9Y6G5 202 aa20.21■□□□□ 0.83
TNFRSF18-201ENST00000328596 C21orf140B9A014 251 aa20.2■□□□□ 0.82
TNFRSF18-201ENST00000328596 ZNF500O60304 480 aaPredicted RBP20.2■□□□□ 0.82
TNFRSF18-201ENST00000328596 C1QL1O75973 258 aa20.2■□□□□ 0.82
TNFRSF18-201ENST00000328596 PRKAR1AP10644 381 aa20.2■□□□□ 0.82
TNFRSF18-201ENST00000328596 CYP2A7P20853 494 aa20.2■□□□□ 0.82
TNFRSF18-201ENST00000328596 ITGA1P56199 1179 aa20.2■□□□□ 0.82
TNFRSF18-201ENST00000328596 MPP1Q00013 466 aa20.2■□□□□ 0.82
TNFRSF18-201ENST00000328596 CDC20Q12834 499 aa20.2■□□□□ 0.82
TNFRSF18-201ENST00000328596 DNASE1L3Q13609 305 aa20.2■□□□□ 0.82
TNFRSF18-201ENST00000328596 TTLL9Q3SXZ7 439 aa20.2■□□□□ 0.82
TNFRSF18-201ENST00000328596 ACSBG2Q5FVE4 666 aa20.2■□□□□ 0.82
TNFRSF18-201ENST00000328596 PRAMEF17Q5VTA0 474 aa20.2■□□□□ 0.82
TNFRSF18-201ENST00000328596 DUPD1Q68J44 220 aa20.2■□□□□ 0.82
TNFRSF18-201ENST00000328596 C8orf74Q6P047 294 aa20.2■□□□□ 0.82
TNFRSF18-201ENST00000328596 ZNF549Q6P9A3 640 aa20.2■□□□□ 0.82
TNFRSF18-201ENST00000328596 IGDCC3Q8IVU1 814 aa20.2■□□□□ 0.82
TNFRSF18-201ENST00000328596 MMGT1Q8N4V1 131 aa20.2■□□□□ 0.82
TNFRSF18-201ENST00000328596 RAB42Q8N4Z0 105 aa20.2■□□□□ 0.82
TNFRSF18-201ENST00000328596 C2orf73Q8N5S3 287 aaPredicted RBP20.2■□□□□ 0.82
TNFRSF18-201ENST00000328596 CEP112Q8N8E3 955 aa20.2■□□□□ 0.82
TNFRSF18-201ENST00000328596 LMNTD1Q8N9Z9 388 aa20.2■□□□□ 0.82
TNFRSF18-201ENST00000328596 SLC38A9Q8NBW4 561 aa20.2■□□□□ 0.82
TNFRSF18-201ENST00000328596 GABPB2Q8TAK5 448 aaPredicted RBP20.2■□□□□ 0.82
TNFRSF18-201ENST00000328596 CT55Q8WUE5 264 aa20.2■□□□□ 0.82
TNFRSF18-201ENST00000328596 N4BP2L2Q92802 583 aaPredicted RBP20.2■□□□□ 0.82
TNFRSF18-201ENST00000328596 KCNJ9Q92806 393 aa20.2■□□□□ 0.82
TNFRSF18-201ENST00000328596 MED8Q96G25 268 aa20.2■□□□□ 0.82
TNFRSF18-201ENST00000328596 LRFN5Q96NI6 719 aa20.2■□□□□ 0.82
TNFRSF18-201ENST00000328596 SEMA4CQ9C0C4 833 aa20.2■□□□□ 0.82
TNFRSF18-201ENST00000328596 AKIRIN1Q9H9L7 192 aaPredicted RBP20.2■□□□□ 0.82
TNFRSF18-201ENST00000328596 WHRNQ9P202 907 aa20.2■□□□□ 0.82
TNFRSF18-201ENST00000328596 TSR3Q9UJK0 312 aaKnown RBP20.2■□□□□ 0.82
TNFRSF18-201ENST00000328596 PCDHGA6Q9Y5G7 932 aa20.2■□□□□ 0.82
TNFRSF18-201ENST00000328596 E7EQ34 232 aa20.19■□□□□ 0.82
TNFRSF18-201ENST00000328596 KALRNO60229 2985 aa20.19■□□□□ 0.82
TNFRSF18-201ENST00000328596 KATNA1O75449 491 aa20.19■□□□□ 0.82
TNFRSF18-201ENST00000328596 HAUS5O94927 633 aa20.19■□□□□ 0.82
TNFRSF18-201ENST00000328596 ERVK-10P10266 1014 aa20.19■□□□□ 0.82
TNFRSF18-201ENST00000328596 GPS2Q13227 327 aa20.19■□□□□ 0.82
TNFRSF18-201ENST00000328596 KLHL38Q2WGJ6 581 aa20.19■□□□□ 0.82
TNFRSF18-201ENST00000328596 CCSMST1Q4G0I0 132 aa20.19■□□□□ 0.82
TNFRSF18-201ENST00000328596 BORAQ6PGQ7 559 aa20.19■□□□□ 0.82
TNFRSF18-201ENST00000328596 TAX1BP1Q86VP1 789 aa20.19■□□□□ 0.82
TNFRSF18-201ENST00000328596 EXD3Q8N9H8 876 aa20.19■□□□□ 0.82
TNFRSF18-201ENST00000328596 C2CD4AQ8NCU7 369 aaPredicted RBP20.19■□□□□ 0.82
TNFRSF18-201ENST00000328596 SLC30A3Q99726 388 aa20.19■□□□□ 0.82
TNFRSF18-201ENST00000328596 MED16Q9Y2X0 877 aa20.19■□□□□ 0.82
TNFRSF18-201ENST00000328596 PIEZO2Q9H5I5 2752 aa20.18■□□□□ 0.82
TNFRSF18-201ENST00000328596 SNRNP200O75643 2136 aaKnown RBP20.18■□□□□ 0.82
TNFRSF18-201ENST00000328596 TP73O15350 636 aa20.18■□□□□ 0.82
TNFRSF18-201ENST00000328596 KLK3P07288 261 aaPredicted RBP20.18■□□□□ 0.82
TNFRSF18-201ENST00000328596 OAS2P29728 719 aaKnown RBP20.18■□□□□ 0.82
TNFRSF18-201ENST00000328596 GABRA4P48169 554 aa20.18■□□□□ 0.82
TNFRSF18-201ENST00000328596 C19orf57Q0VDD7 668 aa20.18■□□□□ 0.82
TNFRSF18-201ENST00000328596 CALCOCO2Q13137 446 aa20.18■□□□□ 0.82
TNFRSF18-201ENST00000328596 HIF1AQ16665 826 aa20.18■□□□□ 0.82
TNFRSF18-201ENST00000328596 C16orf46Q6P387 395 aa20.18■□□□□ 0.82
TNFRSF18-201ENST00000328596 FAM199XQ6PEV8 388 aaPredicted RBP20.18■□□□□ 0.82
TNFRSF18-201ENST00000328596 ZNF517Q6ZMY9 492 aaPredicted RBP20.18■□□□□ 0.82
TNFRSF18-201ENST00000328596 NEK10Q6ZWH5 1172 aa20.18■□□□□ 0.82
TNFRSF18-201ENST00000328596 FAM20CQ8IXL6 584 aa20.18■□□□□ 0.82
TNFRSF18-201ENST00000328596 GPR135Q8IZ08 494 aa20.18■□□□□ 0.82
TNFRSF18-201ENST00000328596 ZNF843Q8N446 348 aa20.18■□□□□ 0.82
TNFRSF18-201ENST00000328596 GIMAP7Q8NHV1 300 aa20.18■□□□□ 0.82
TNFRSF18-201ENST00000328596 HMGCLL1Q8TB92 370 aa20.18■□□□□ 0.82
TNFRSF18-201ENST00000328596 MR1Q95460 341 aa20.18■□□□□ 0.82
TNFRSF18-201ENST00000328596 LRRC39Q96DD0 335 aa20.18■□□□□ 0.82
TNFRSF18-201ENST00000328596 CLIP3Q96DZ5 547 aa20.18■□□□□ 0.82
TNFRSF18-201ENST00000328596 PWWP2AQ96N64 755 aa20.18■□□□□ 0.82
TNFRSF18-201ENST00000328596 GPR87Q9BY21 358 aa20.18■□□□□ 0.82
TNFRSF18-201ENST00000328596 DPH5Q9H2P9 285 aa20.18■□□□□ 0.82
TNFRSF18-201ENST00000328596 ACTR5Q9H9F9 607 aaPredicted RBP20.18■□□□□ 0.82
TNFRSF18-201ENST00000328596 SPATA7Q9P0W8 599 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms