RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 ZNF226Q9NYT6 803 aa7.63□□□□□ -1.19
CNOT4-201ENST00000315544 CROTQ9UKG9 612 aa7.63□□□□□ -1.19
CNOT4-201ENST00000315544 CPQQ9Y646 472 aa7.63□□□□□ -1.19
CNOT4-201ENST00000315544 GIPC1O14908 333 aa7.63□□□□□ -1.19
CNOT4-201ENST00000315544 GPR37L1O60883 481 aa7.63□□□□□ -1.19
CNOT4-201ENST00000315544 VPS4BO75351 444 aa7.63□□□□□ -1.19
CNOT4-201ENST00000315544 TULP3O75386 442 aa7.63□□□□□ -1.19
CNOT4-201ENST00000315544 SLCO2B1O94956 709 aa7.63□□□□□ -1.19
CNOT4-201ENST00000315544 ACRP10323 421 aa7.63□□□□□ -1.19
CNOT4-201ENST00000315544 ACRV1P26436 265 aa7.63□□□□□ -1.19
CNOT4-201ENST00000315544 AOAHP28039 575 aa7.63□□□□□ -1.19
CNOT4-201ENST00000315544 EPHB1P54762 984 aa7.63□□□□□ -1.19
CNOT4-201ENST00000315544 CREMQ03060 361 aa7.63□□□□□ -1.19
CNOT4-201ENST00000315544 CSHL1Q14406 222 aa7.63□□□□□ -1.19
CNOT4-201ENST00000315544 AGAP7PQ5VUJ5 663 aa7.63□□□□□ -1.19
CNOT4-201ENST00000315544 ADGRD2Q7Z7M1 963 aa7.63□□□□□ -1.19
CNOT4-201ENST00000315544 VRK3Q8IV63 474 aa7.63□□□□□ -1.19
CNOT4-201ENST00000315544 FAM47BQ8NA70 645 aa7.63□□□□□ -1.19
CNOT4-201ENST00000315544 LZICQ8WZA0 190 aa7.63□□□□□ -1.19
CNOT4-201ENST00000315544 EGLN2Q96KS0 407 aa7.63□□□□□ -1.19
CNOT4-201ENST00000315544 SLC22A12Q96S37 553 aa7.63□□□□□ -1.19
CNOT4-201ENST00000315544 CENPKQ9BS16 269 aa7.63□□□□□ -1.19
CNOT4-201ENST00000315544 CYP4F11Q9HBI6 524 aa7.63□□□□□ -1.19
CNOT4-201ENST00000315544 SMPD3Q9NY59 655 aaPredicted RBP7.63□□□□□ -1.19
CNOT4-201ENST00000315544 KLHL8Q9P2G9 620 aaPredicted RBP7.63□□□□□ -1.19
CNOT4-201ENST00000315544 APPL1Q9UKG1 709 aa7.63□□□□□ -1.19
CNOT4-201ENST00000315544 ABCG2Q9UNQ0 655 aa7.63□□□□□ -1.19
CNOT4-201ENST00000315544 PCDHB1Q9Y5F3 818 aa7.63□□□□□ -1.19
CNOT4-201ENST00000315544 CASTOR2A6NHX0 329 aa7.62□□□□□ -1.19
CNOT4-201ENST00000315544 KLF4O43474 513 aa7.62□□□□□ -1.19
CNOT4-201ENST00000315544 DFNA5O60443 496 aa7.62□□□□□ -1.19
CNOT4-201ENST00000315544 TBX19O60806 448 aa7.62□□□□□ -1.19
CNOT4-201ENST00000315544 RFPL2O75678 378 aa7.62□□□□□ -1.19
CNOT4-201ENST00000315544 WDR47O94967 919 aa7.62□□□□□ -1.19
CNOT4-201ENST00000315544 HSPA4LO95757 839 aa7.62□□□□□ -1.19
CNOT4-201ENST00000315544 CCDC159P0C7I6 412 aa7.62□□□□□ -1.19
CNOT4-201ENST00000315544 SLC19A1P41440 591 aa7.62□□□□□ -1.19
CNOT4-201ENST00000315544 RENBPP51606 427 aa7.62□□□□□ -1.19
CNOT4-201ENST00000315544 LIPEQ05469 1076 aa7.62□□□□□ -1.19
CNOT4-201ENST00000315544 MAP7D1Q3KQU3 841 aa7.62□□□□□ -1.19
CNOT4-201ENST00000315544 LIX1LQ8IVB5 337 aa7.62□□□□□ -1.19
CNOT4-201ENST00000315544 CADM3Q8N126 398 aa7.62□□□□□ -1.19
CNOT4-201ENST00000315544 PARP8Q8N3A8 854 aa7.62□□□□□ -1.19
CNOT4-201ENST00000315544 TP53I13Q8NBR0 393 aaPredicted RBP7.62□□□□□ -1.19
CNOT4-201ENST00000315544 FBXO15Q8NCQ5 510 aaPredicted RBP7.62□□□□□ -1.19
CNOT4-201ENST00000315544 ASB11Q8WXH4 323 aa7.62□□□□□ -1.19
CNOT4-201ENST00000315544 NRBF2Q96F24 287 aa7.62□□□□□ -1.19
CNOT4-201ENST00000315544 ACOX2Q99424 681 aa7.62□□□□□ -1.19
CNOT4-201ENST00000315544 SLC2A4RGQ9NR83 387 aa7.62□□□□□ -1.19
CNOT4-201ENST00000315544 CCDC167Q9P0B6 97 aa7.62□□□□□ -1.19
CNOT4-201ENST00000315544 AFF4Q9UHB7 1163 aaKnown RBP7.62□□□□□ -1.19
CNOT4-201ENST00000315544 VPS9D1Q9Y2B5 631 aa7.62□□□□□ -1.19
CNOT4-201ENST00000315544 MBTPS2O43462 519 aa7.62□□□□□ -1.19
CNOT4-201ENST00000315544 TACR1P25103 407 aa7.62□□□□□ -1.19
CNOT4-201ENST00000315544 SSTR4P31391 388 aa7.62□□□□□ -1.19
CNOT4-201ENST00000315544 EIF2DP41214 584 aaKnown RBP7.62□□□□□ -1.19
CNOT4-201ENST00000315544 MAGEA8P43361 318 aa7.62□□□□□ -1.19
CNOT4-201ENST00000315544 POLE2P56282 527 aa7.62□□□□□ -1.19
CNOT4-201ENST00000315544 DCDC1P59894 354 aa7.62□□□□□ -1.19
CNOT4-201ENST00000315544 STX5Q13190 355 aa7.62□□□□□ -1.19
CNOT4-201ENST00000315544 RAB33AQ14088 237 aa7.62□□□□□ -1.19
CNOT4-201ENST00000315544 MEP1AQ16819 746 aa7.62□□□□□ -1.19
CNOT4-201ENST00000315544 CCNYL2Q5T2Q4 361 aa7.62□□□□□ -1.19
CNOT4-201ENST00000315544 ZNF697Q5TEC3 545 aa7.62□□□□□ -1.19
CNOT4-201ENST00000315544 AGAP9Q5VTM2 703 aa7.62□□□□□ -1.19
CNOT4-201ENST00000315544 C11orf96Q7Z7L8 435 aa7.62□□□□□ -1.19
CNOT4-201ENST00000315544 PROSER1Q86XN7 944 aa7.62□□□□□ -1.19
CNOT4-201ENST00000315544 ZC3H7AQ8IWR0 971 aaKnown RBP7.62□□□□□ -1.19
CNOT4-201ENST00000315544 RPS4Y2Q8TD47 263 aa7.62□□□□□ -1.19
CNOT4-201ENST00000315544 HRASLS5Q96KN8 279 aa7.62□□□□□ -1.19
CNOT4-201ENST00000315544 CGREF1Q99674 301 aa7.62□□□□□ -1.19
CNOT4-201ENST00000315544 SNX25Q9H3E2 840 aa7.62□□□□□ -1.19
CNOT4-201ENST00000315544 IFT80Q9P2H3 777 aaPredicted RBP7.62□□□□□ -1.19
CNOT4-201ENST00000315544 MID2Q9UJV3 735 aa7.62□□□□□ -1.19
CNOT4-201ENST00000315544 CLDN24A6NM45 220 aa7.62□□□□□ -1.19
CNOT4-201ENST00000315544 SLC1A7O00341 560 aa7.62□□□□□ -1.19
CNOT4-201ENST00000315544 PCDHGA12O60330 932 aa7.62□□□□□ -1.19
CNOT4-201ENST00000315544 FOXD2O60548 495 aaPredicted RBP7.62□□□□□ -1.19
CNOT4-201ENST00000315544 PSIP1O75475 530 aaKnown RBP7.62□□□□□ -1.19
CNOT4-201ENST00000315544 TACR2P21452 398 aa7.62□□□□□ -1.19
CNOT4-201ENST00000315544 SLC11A1P49279 550 aa7.62□□□□□ -1.19
CNOT4-201ENST00000315544 SELENBP1Q13228 472 aa7.62□□□□□ -1.19
CNOT4-201ENST00000315544 IL18R1Q13478 541 aa7.62□□□□□ -1.19
CNOT4-201ENST00000315544 C6orf141Q5SZD1 244 aa7.62□□□□□ -1.19
CNOT4-201ENST00000315544 SULT1C3Q6IMI6 304 aa7.62□□□□□ -1.19
CNOT4-201ENST00000315544 TMEM26Q6ZUK4 368 aa7.62□□□□□ -1.19
CNOT4-201ENST00000315544 ENTHD1Q8IYW4 607 aa7.62□□□□□ -1.19
CNOT4-201ENST00000315544 ST13P4Q8IZP2 240 aaPredicted RBP7.62□□□□□ -1.19
CNOT4-201ENST00000315544 NLGN4XQ8N0W4 816 aa7.62□□□□□ -1.19
CNOT4-201ENST00000315544 LEMD2Q8NC56 503 aa7.62□□□□□ -1.19
CNOT4-201ENST00000315544 PPHLN1Q8NEY8 458 aaKnown RBP7.62□□□□□ -1.19
CNOT4-201ENST00000315544 OR4F6Q8NGB9 312 aa7.62□□□□□ -1.19
CNOT4-201ENST00000315544 CCDC124Q96CT7 223 aaKnown RBP7.62□□□□□ -1.19
CNOT4-201ENST00000315544 ITPKCQ96DU7 683 aa7.62□□□□□ -1.19
CNOT4-201ENST00000315544 TRMT61AQ96FX7 289 aaKnown RBP7.62□□□□□ -1.19
CNOT4-201ENST00000315544 JAM3Q9BX67 310 aa7.62□□□□□ -1.19
CNOT4-201ENST00000315544 BARHL1Q9BZE3 327 aa7.62□□□□□ -1.19
CNOT4-201ENST00000315544 CATSPERBQ9H7T0 1116 aa7.62□□□□□ -1.19
CNOT4-201ENST00000315544 OPTCQ9UBM4 332 aa7.62□□□□□ -1.19
CNOT4-201ENST00000315544 TRAPPC4Q9Y296 219 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms