RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 CPZQ66K79 652 aa17.64■□□□□ 0.41
SPSB4-201ENST00000310546 ANKS6Q68DC2 871 aa17.64■□□□□ 0.41
SPSB4-201ENST00000310546 P3H2Q8IVL5 708 aa17.64■□□□□ 0.41
SPSB4-201ENST00000310546 ATPAF2Q8N5M1 289 aa17.64■□□□□ 0.41
SPSB4-201ENST00000310546 SLC7A6Q92536 515 aa17.64■□□□□ 0.41
SPSB4-201ENST00000310546 RIPOR3Q96MK2 946 aa17.64■□□□□ 0.41
SPSB4-201ENST00000310546 ZNF599Q96NL3 588 aa17.64■□□□□ 0.41
SPSB4-201ENST00000310546 SIK2Q9H0K1 926 aa17.64■□□□□ 0.41
SPSB4-201ENST00000310546 RNF112Q9ULX5 631 aa17.64■□□□□ 0.41
SPSB4-201ENST00000310546 PCDHGA12O60330 932 aa17.64■□□□□ 0.41
SPSB4-201ENST00000310546 PAPSS2O95340 614 aaPredicted RBP17.64■□□□□ 0.41
SPSB4-201ENST00000310546 STAU1O95793 577 aaKnown RBP17.64■□□□□ 0.41
SPSB4-201ENST00000310546 S1PR4O95977 384 aa17.64■□□□□ 0.41
SPSB4-201ENST00000310546 SERPINF2P08697 491 aa17.64■□□□□ 0.41
SPSB4-201ENST00000310546 SOX6P35712 828 aa17.64■□□□□ 0.41
SPSB4-201ENST00000310546 GEMP55040 296 aa17.64■□□□□ 0.41
SPSB4-201ENST00000310546 PRKCZQ05513 592 aa17.64■□□□□ 0.41
SPSB4-201ENST00000310546 ZMAT1Q5H9K5 638 aa17.64■□□□□ 0.41
SPSB4-201ENST00000310546 DPY19L3Q6ZPD9 716 aa17.64■□□□□ 0.41
SPSB4-201ENST00000310546 MICAL3Q7RTP6 2002 aa17.64■□□□□ 0.41
SPSB4-201ENST00000310546 UNC93AQ86WB7 457 aa17.64■□□□□ 0.41
SPSB4-201ENST00000310546 DTX3Q8N9I9 347 aa17.64■□□□□ 0.41
SPSB4-201ENST00000310546 DNASE1L2Q92874 299 aa17.64■□□□□ 0.41
SPSB4-201ENST00000310546 MRGPRX2Q96LB1 330 aa17.64■□□□□ 0.41
SPSB4-201ENST00000310546 TKTL2Q9H0I9 626 aa17.64■□□□□ 0.41
SPSB4-201ENST00000310546 FKBP14Q9NWM8 211 aa17.64■□□□□ 0.41
SPSB4-201ENST00000310546 GALPQ9UBC7 116 aa17.64■□□□□ 0.41
SPSB4-201ENST00000310546 ZNF225Q9UK10 706 aa17.64■□□□□ 0.41
SPSB4-201ENST00000310546 FBXW11Q9UKB1 542 aa17.64■□□□□ 0.41
SPSB4-201ENST00000310546 COL1A2P08123 1366 aa17.64■□□□□ 0.41
SPSB4-201ENST00000310546 ZSWIM8A7E2V4 1837 aa17.63■□□□□ 0.41
SPSB4-201ENST00000310546 UGT2B15P54855 530 aa17.63■□□□□ 0.41
SPSB4-201ENST00000310546 POU6F2P78424 691 aaPredicted RBP17.63■□□□□ 0.41
SPSB4-201ENST00000310546 CARD16Q5EG05 197 aa17.63■□□□□ 0.41
SPSB4-201ENST00000310546 INTS6LQ5JSJ4 861 aaKnown RBP17.63■□□□□ 0.41
SPSB4-201ENST00000310546 FAM205BPQ63HN1 556 aa17.63■□□□□ 0.41
SPSB4-201ENST00000310546 CYP4Z2PQ8N1L4 340 aa17.63■□□□□ 0.41
SPSB4-201ENST00000310546 UBE2J2Q8N2K1 259 aa17.63■□□□□ 0.41
SPSB4-201ENST00000310546 CCDC115Q96NT0 180 aa17.63■□□□□ 0.41
SPSB4-201ENST00000310546 GON7Q9BXV9 100 aa17.63■□□□□ 0.41
SPSB4-201ENST00000310546 UCK2Q9BZX2 261 aa17.63■□□□□ 0.41
SPSB4-201ENST00000310546 GOLGA2P5Q9HBQ8 144 aa17.63■□□□□ 0.41
SPSB4-201ENST00000310546 RBM22Q9NW64 420 aaKnown RBP eCLIP17.63■□□□□ 0.41
SPSB4-201ENST00000310546 IPPQ9Y573 584 aa17.63■□□□□ 0.41
SPSB4-201ENST00000310546 WBP4O75554 376 aaKnown RBP17.63■□□□□ 0.41
SPSB4-201ENST00000310546 MSH3P20585 1137 aa17.63■□□□□ 0.41
SPSB4-201ENST00000310546 ADRA1AP35348 466 aa17.63■□□□□ 0.41
SPSB4-201ENST00000310546 PTGS2P35354 604 aa17.63■□□□□ 0.41
SPSB4-201ENST00000310546 ARHGDIAP52565 204 aa17.63■□□□□ 0.41
SPSB4-201ENST00000310546 KEAP1Q14145 624 aa17.63■□□□□ 0.41
SPSB4-201ENST00000310546 TRIM71Q2Q1W2 868 aaKnown RBP17.63■□□□□ 0.41
SPSB4-201ENST00000310546 RANBP10Q6VN20 620 aa17.63■□□□□ 0.41
SPSB4-201ENST00000310546 CCDC190Q86UF4 302 aa17.63■□□□□ 0.41
SPSB4-201ENST00000310546 SLC51BQ86UW2 128 aa17.63■□□□□ 0.41
SPSB4-201ENST00000310546 NETO1Q8TDF5 533 aa17.63■□□□□ 0.41
SPSB4-201ENST00000310546 EDEM1Q92611 657 aa17.63■□□□□ 0.41
SPSB4-201ENST00000310546 DPF3Q92784 378 aa17.63■□□□□ 0.41
SPSB4-201ENST00000310546 ATOH8Q96SQ7 321 aa17.63■□□□□ 0.41
SPSB4-201ENST00000310546 RNF39Q9H2S5 420 aa17.63■□□□□ 0.41
SPSB4-201ENST00000310546 WDCPQ9H6R7 721 aa17.63■□□□□ 0.41
SPSB4-201ENST00000310546 KIF17Q9P2E2 1029 aa17.63■□□□□ 0.41
SPSB4-201ENST00000310546 MUTYHQ9UIF7 546 aa17.63■□□□□ 0.41
SPSB4-201ENST00000310546 YJEFN3A6XGL0 299 aa17.62■□□□□ 0.41
SPSB4-201ENST00000310546 ANKRD28O15084 1053 aa17.62■□□□□ 0.41
SPSB4-201ENST00000310546 CREG1O75629 220 aa17.62■□□□□ 0.41
SPSB4-201ENST00000310546 HLA-DQB2P05538 268 aa17.62■□□□□ 0.41
SPSB4-201ENST00000310546 SLC10A3P09131 477 aa17.62■□□□□ 0.41
SPSB4-201ENST00000310546 IGFBP6P24592 240 aaPredicted RBP17.62■□□□□ 0.41
SPSB4-201ENST00000310546 RPL34P49207 117 aaKnown RBP17.62■□□□□ 0.41
SPSB4-201ENST00000310546 XKR7Q5GH72 579 aa17.62■□□□□ 0.41
SPSB4-201ENST00000310546 CCDC71Q8IV32 467 aaPredicted RBP17.62■□□□□ 0.41
SPSB4-201ENST00000310546 OR8J3Q8NGG0 315 aa17.62■□□□□ 0.41
SPSB4-201ENST00000310546 RNF34Q969K3 372 aa17.62■□□□□ 0.41
SPSB4-201ENST00000310546 B3GNT4Q9C0J1 378 aa17.62■□□□□ 0.41
SPSB4-201ENST00000310546 AP5M1Q9H0R1 490 aa17.62■□□□□ 0.41
SPSB4-201ENST00000310546 FAM124BQ9H5Z6 455 aaPredicted RBP17.62■□□□□ 0.41
SPSB4-201ENST00000310546 DCAF13Q9NV06 445 aaKnown RBP17.62■□□□□ 0.41
SPSB4-201ENST00000310546 CCDC59Q9P031 241 aaKnown RBP17.62■□□□□ 0.41
SPSB4-201ENST00000310546 MYLKQ15746 1914 aa17.62■□□□□ 0.41
SPSB4-201ENST00000310546 CACNG3O60359 315 aa17.62■□□□□ 0.41
SPSB4-201ENST00000310546 MAGEA11P43364 429 aa17.62■□□□□ 0.41
SPSB4-201ENST00000310546 CRISP3P54108 245 aa17.62■□□□□ 0.41
SPSB4-201ENST00000310546 WNT3AP56704 352 aa17.62■□□□□ 0.41
SPSB4-201ENST00000310546 PROX2Q3B8N5 592 aa17.62■□□□□ 0.41
SPSB4-201ENST00000310546 SHQ1Q6PI26 577 aaKnown RBP17.62■□□□□ 0.41
SPSB4-201ENST00000310546 ZDHHC21Q8IVQ6 265 aa17.62■□□□□ 0.41
SPSB4-201ENST00000310546 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.62■□□□□ 0.41
SPSB4-201ENST00000310546 ATG16L2Q8NAA4 619 aa17.62■□□□□ 0.41
SPSB4-201ENST00000310546 IPCEF1Q8WWN9 437 aaPredicted RBP17.62■□□□□ 0.41
SPSB4-201ENST00000310546 CCDC32Q9BV29 185 aa17.62■□□□□ 0.41
SPSB4-201ENST00000310546 NXF3Q9H4D5 531 aaKnown RBP17.62■□□□□ 0.41
SPSB4-201ENST00000310546 SYTL2Q9HCH5 934 aa17.62■□□□□ 0.41
SPSB4-201ENST00000310546 PIN4Q9Y237 131 aaKnown RBP17.62■□□□□ 0.41
SPSB4-201ENST00000310546 ARHGEF9O43307 516 aa17.61■□□□□ 0.41
SPSB4-201ENST00000310546 AKR7A2O43488 359 aa17.61■□□□□ 0.41
SPSB4-201ENST00000310546 TSPAN1O60635 241 aa17.61■□□□□ 0.41
SPSB4-201ENST00000310546 WISP3O95389 354 aaPredicted RBP17.61■□□□□ 0.41
SPSB4-201ENST00000310546 ZNF682O95780 498 aa17.61■□□□□ 0.41
SPSB4-201ENST00000310546 UROSP10746 265 aa17.61■□□□□ 0.41
SPSB4-201ENST00000310546 TNFSF8P32971 234 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms