RNA–Protein interactions for RNA: ENST00000308639.13

RELA-201, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RELA, Length 2,681 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-201ENST00000308639 GRSF1Q12849 480 aaKnown RBP eCLIP20.34■□□□□ 0.85
RELA-201ENST00000308639 CBX2Q14781 532 aaPredicted RBP20.34■□□□□ 0.85
RELA-201ENST00000308639 CCDC92Q53HC0 331 aaPredicted RBP20.34■□□□□ 0.85
RELA-201ENST00000308639 CROCCP3Q8IVE0 287 aa20.34■□□□□ 0.85
RELA-201ENST00000308639 ZNF555Q8NEP9 628 aa20.34■□□□□ 0.85
RELA-201ENST00000308639 PARVBQ9HBI1 364 aa20.34■□□□□ 0.85
RELA-201ENST00000308639 DCAF13Q9NV06 445 aaKnown RBP20.34■□□□□ 0.85
RELA-201ENST00000308639 FAM8A1Q9UBU6 413 aa20.34■□□□□ 0.85
RELA-201ENST00000308639 ABT1Q9ULW3 272 aaKnown RBP20.34■□□□□ 0.85
RELA-201ENST00000308639 TRBV5-3A0A0A0MS03 114 aa20.33■□□□□ 0.85
RELA-201ENST00000308639 TRIM64BA6NI03 449 aa20.33■□□□□ 0.85
RELA-201ENST00000308639 IFRD1O00458 451 aaPredicted RBP20.33■□□□□ 0.85
RELA-201ENST00000308639 RPS14P62263 151 aaKnown RBP20.33■□□□□ 0.85
RELA-201ENST00000308639 ATP1A4Q13733 1029 aa20.33■□□□□ 0.85
RELA-201ENST00000308639 GTF2IRD2BQ6EKJ0 949 aa20.33■□□□□ 0.85
RELA-201ENST00000308639 GTF2IRD2Q86UP8 949 aa20.33■□□□□ 0.85
RELA-201ENST00000308639 BEGAINQ9BUH8 593 aa20.33■□□□□ 0.85
RELA-201ENST00000308639 EBPLQ9BY08 206 aa20.33■□□□□ 0.85
RELA-201ENST00000308639 ZNF334Q9HCZ1 680 aaPredicted RBP20.33■□□□□ 0.85
RELA-201ENST00000308639 SCN8AQ9UQD0 1980 aa20.33■□□□□ 0.85
RELA-201ENST00000308639 LOC100130705A0A1B0GUX0 176 aa20.33■□□□□ 0.84
RELA-201ENST00000308639 HTR1BP28222 390 aa20.33■□□□□ 0.84
RELA-201ENST00000308639 CTSOP43234 321 aaPredicted RBP20.33■□□□□ 0.84
RELA-201ENST00000308639 ALDH7A1P49419 539 aaKnown RBP20.33■□□□□ 0.84
RELA-201ENST00000308639 HSPA14Q0VDF9 509 aa20.33■□□□□ 0.84
RELA-201ENST00000308639 SF1Q15637 639 aaKnown RBP20.33■□□□□ 0.84
RELA-201ENST00000308639 TTC23Q5W5X9 447 aa20.33■□□□□ 0.84
RELA-201ENST00000308639 VRK3Q8IV63 474 aa20.33■□□□□ 0.84
RELA-201ENST00000308639 SELENOMQ8WWX9 145 aa20.33■□□□□ 0.84
RELA-201ENST00000308639 APIPQ96GX9 242 aa20.33■□□□□ 0.84
RELA-201ENST00000308639 CCDC138Q96M89 665 aa20.33■□□□□ 0.84
RELA-201ENST00000308639 TUBA1CQ9BQE3 449 aa20.33■□□□□ 0.84
RELA-201ENST00000308639 CPPED1Q9BRF8 314 aaPredicted RBP20.33■□□□□ 0.84
RELA-201ENST00000308639 RHNO1Q9BSD3 238 aa20.33■□□□□ 0.84
RELA-201ENST00000308639 FUNDC2Q9BWH2 189 aa20.33■□□□□ 0.84
RELA-201ENST00000308639 TMEFF2Q9UIK5 374 aaPredicted RBP20.33■□□□□ 0.84
RELA-201ENST00000308639 VPS4AQ9UN37 437 aa20.33■□□□□ 0.84
RELA-201ENST00000308639 CPQQ9Y646 472 aa20.33■□□□□ 0.84
RELA-201ENST00000308639 GREM1O60565 184 aa20.32■□□□□ 0.84
RELA-201ENST00000308639 MTX2O75431 263 aa20.32■□□□□ 0.84
RELA-201ENST00000308639 BCL10O95999 233 aa20.32■□□□□ 0.84
RELA-201ENST00000308639 EBLN1P0CF75 366 aa20.32■□□□□ 0.84
RELA-201ENST00000308639 CCR7P32248 378 aa20.32■□□□□ 0.84
RELA-201ENST00000308639 RPIAP49247 311 aa20.32■□□□□ 0.84
RELA-201ENST00000308639 B4GALNT1Q00973 533 aa20.32■□□□□ 0.84
RELA-201ENST00000308639 ZNF829Q3KNS6 432 aaPredicted RBP20.32■□□□□ 0.84
RELA-201ENST00000308639 DGKKQ5KSL6 1271 aa20.32■□□□□ 0.84
RELA-201ENST00000308639 GPR149Q86SP6 731 aa20.32■□□□□ 0.84
RELA-201ENST00000308639 CHPFQ8IZ52 775 aa20.32■□□□□ 0.84
RELA-201ENST00000308639 NXPE1Q8N323 547 aa20.32■□□□□ 0.84
RELA-201ENST00000308639 PNPT1Q8TCS8 783 aaKnown RBP20.32■□□□□ 0.84
RELA-201ENST00000308639 USP7Q93009 1102 aa20.32■□□□□ 0.84
RELA-201ENST00000308639 NTMT1Q9BV86 223 aa20.32■□□□□ 0.84
RELA-201ENST00000308639 TBC1D23Q9NUY8 699 aa20.32■□□□□ 0.84
RELA-201ENST00000308639 DNMT3BQ9UBC3 853 aaKnown RBP20.32■□□□□ 0.84
RELA-201ENST00000308639 PRAMEF4O60810 478 aa20.32■□□□□ 0.84
RELA-201ENST00000308639 ZNF682O95780 498 aa20.32■□□□□ 0.84
RELA-201ENST00000308639 FTH1P02794 183 aa20.32■□□□□ 0.84
RELA-201ENST00000308639 COL6A1P12109 1028 aa20.32■□□□□ 0.84
RELA-201ENST00000308639 PORP16435 677 aaPredicted RBP20.32■□□□□ 0.84
RELA-201ENST00000308639 JUNBP17275 347 aaPredicted RBP20.32■□□□□ 0.84
RELA-201ENST00000308639 MSH3P20585 1137 aa20.32■□□□□ 0.84
RELA-201ENST00000308639 GZMMP51124 257 aa20.32■□□□□ 0.84
RELA-201ENST00000308639 CCR3P51677 355 aa20.32■□□□□ 0.84
RELA-201ENST00000308639 CCL23P55773 120 aa20.32■□□□□ 0.84
RELA-201ENST00000308639 AP1S1P61966 158 aa20.32■□□□□ 0.84
RELA-201ENST00000308639 SIM2Q14190 667 aaPredicted RBP20.32■□□□□ 0.84
RELA-201ENST00000308639 SKIV2LQ15477 1246 aaKnown RBP20.32■□□□□ 0.84
RELA-201ENST00000308639 ATP13A5Q4VNC0 1218 aa20.32■□□□□ 0.84
RELA-201ENST00000308639 CARD16Q5EG05 197 aa20.32■□□□□ 0.84
RELA-201ENST00000308639 PRAMEF9Q5VWM5 478 aa20.32■□□□□ 0.84
RELA-201ENST00000308639 C16orf87Q6PH81 154 aa20.32■□□□□ 0.84
RELA-201ENST00000308639 BTLAQ7Z6A9 289 aa20.32■□□□□ 0.84
RELA-201ENST00000308639 DNAJB7Q7Z6W7 309 aaPredicted RBP20.32■□□□□ 0.84
RELA-201ENST00000308639 PJA1Q8NG27 643 aa20.32■□□□□ 0.84
RELA-201ENST00000308639 HDAC2Q92769 488 aaKnown RBP20.32■□□□□ 0.84
RELA-201ENST00000308639 RETREG1Q9H6L5 497 aa20.32■□□□□ 0.84
RELA-201ENST00000308639 TRPS1Q9UHF7 1281 aa20.32■□□□□ 0.84
RELA-201ENST00000308639 CD84Q9UIB8 345 aa20.32■□□□□ 0.84
RELA-201ENST00000308639 ABCG2Q9UNQ0 655 aa20.32■□□□□ 0.84
RELA-201ENST00000308639 TRBV5-4A0A0C4DH59 114 aa20.31■□□□□ 0.84
RELA-201ENST00000308639 A0A1W2PQ67 120 aa20.31■□□□□ 0.84
RELA-201ENST00000308639 ZNF821O75541 412 aaPredicted RBP20.31■□□□□ 0.84
RELA-201ENST00000308639 CLDN9O95484 217 aa20.31■□□□□ 0.84
RELA-201ENST00000308639 HPRP00739 348 aa20.31■□□□□ 0.84
RELA-201ENST00000308639 ITPKAP23677 461 aa20.31■□□□□ 0.84
RELA-201ENST00000308639 TM4SF4P48230 202 aa20.31■□□□□ 0.84
RELA-201ENST00000308639 TMBIM6P55061 237 aa20.31■□□□□ 0.84
RELA-201ENST00000308639 ISL1P61371 349 aa20.31■□□□□ 0.84
RELA-201ENST00000308639 RAPSNQ13702 412 aa20.31■□□□□ 0.84
RELA-201ENST00000308639 RBM48Q5RL73 367 aaKnown RBP20.31■□□□□ 0.84
RELA-201ENST00000308639 LAIR1Q6GTX8 287 aa20.31■□□□□ 0.84
RELA-201ENST00000308639 OR4F3Q6IEY1 312 aa20.31■□□□□ 0.84
RELA-201ENST00000308639 CEP68Q76N32 757 aa20.31■□□□□ 0.84
RELA-201ENST00000308639 CRIPAKQ8N1N5 446 aa20.31■□□□□ 0.84
RELA-201ENST00000308639 BORCS5Q969J3 196 aa20.31■□□□□ 0.84
RELA-201ENST00000308639 APOLD1Q96LR9 279 aa20.31■□□□□ 0.84
RELA-201ENST00000308639 RBM4BQ9BQ04 359 aaKnown RBP20.31■□□□□ 0.84
RELA-201ENST00000308639 RBM4Q9BWF3 364 aaKnown RBP20.31■□□□□ 0.84
RELA-201ENST00000308639 MYOFQ9NZM1 2061 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms