RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 UHRF1Q96T88 793 aaPredicted RBP15.27■□□□□ 0.04
HERPUD1-201ENST00000300302 EFCAB1Q9HAE3 211 aa15.27■□□□□ 0.04
HERPUD1-201ENST00000300302 INTS7Q9NVH2 962 aaKnown RBP15.27■□□□□ 0.04
HERPUD1-201ENST00000300302 NDE1Q9NXR1 346 aa15.27■□□□□ 0.04
HERPUD1-201ENST00000300302 CCDC167Q9P0B6 97 aa15.27■□□□□ 0.04
HERPUD1-201ENST00000300302 GIMAP2Q9UG22 337 aa15.27■□□□□ 0.04
HERPUD1-201ENST00000300302 MOSPD1Q9UJG1 213 aa15.27■□□□□ 0.04
HERPUD1-201ENST00000300302 ZNF490Q9ULM2 529 aaPredicted RBP15.27■□□□□ 0.04
HERPUD1-201ENST00000300302 DOCK9Q9BZ29 2069 aa15.27■□□□□ 0.03
HERPUD1-201ENST00000300302 MANBAO00462 879 aa15.27■□□□□ 0.03
HERPUD1-201ENST00000300302 CLGNO14967 610 aa15.27■□□□□ 0.03
HERPUD1-201ENST00000300302 IGLV3-19P01714 112 aa15.27■□□□□ 0.03
HERPUD1-201ENST00000300302 ACP5P13686 325 aa15.27■□□□□ 0.03
HERPUD1-201ENST00000300302 AKT2P31751 481 aa15.27■□□□□ 0.03
HERPUD1-201ENST00000300302 HALP42357 657 aa15.27■□□□□ 0.03
HERPUD1-201ENST00000300302 SLC25A3Q00325 362 aa15.27■□□□□ 0.03
HERPUD1-201ENST00000300302 IRF8Q02556 426 aa15.27■□□□□ 0.03
HERPUD1-201ENST00000300302 ZP2Q05996 745 aa15.27■□□□□ 0.03
HERPUD1-201ENST00000300302 CPSF6Q16630 551 aaKnown RBP eCLIP15.27■□□□□ 0.03
HERPUD1-201ENST00000300302 IMPG1Q17R60 797 aa15.27■□□□□ 0.03
HERPUD1-201ENST00000300302 C6orf136Q5SQH8 315 aa15.27■□□□□ 0.03
HERPUD1-201ENST00000300302 FBXW10Q5XX13 1052 aa15.27■□□□□ 0.03
HERPUD1-201ENST00000300302 TRIM46Q7Z4K8 759 aa15.27■□□□□ 0.03
HERPUD1-201ENST00000300302 ZNF687Q8N1G0 1237 aa15.27■□□□□ 0.03
HERPUD1-201ENST00000300302 FNDC5Q8NAU1 212 aa15.27■□□□□ 0.03
HERPUD1-201ENST00000300302 SPDYE1Q8NFV5 336 aaPredicted RBP15.27■□□□□ 0.03
HERPUD1-201ENST00000300302 ZNF480Q8WV37 535 aa15.27■□□□□ 0.03
HERPUD1-201ENST00000300302 USP7Q93009 1102 aa15.27■□□□□ 0.03
HERPUD1-201ENST00000300302 SLC25A23Q9BV35 468 aa15.27■□□□□ 0.03
HERPUD1-201ENST00000300302 ELOVL6Q9H5J4 265 aa15.27■□□□□ 0.03
HERPUD1-201ENST00000300302 SDR39U1Q9NRG7 319 aaPredicted RBP15.27■□□□□ 0.03
HERPUD1-201ENST00000300302 GPRC5BQ9NZH0 403 aa15.27■□□□□ 0.03
HERPUD1-201ENST00000300302 WNT16Q9UBV4 365 aa15.27■□□□□ 0.03
HERPUD1-201ENST00000300302 EBF1Q9UH73 591 aa15.27■□□□□ 0.03
HERPUD1-201ENST00000300302 FBXL21Q9UKT6 434 aa15.27■□□□□ 0.03
HERPUD1-201ENST00000300302 AIM2O14862 343 aa15.26■□□□□ 0.03
HERPUD1-201ENST00000300302 MGRN1O60291 552 aa15.26■□□□□ 0.03
HERPUD1-201ENST00000300302 SNRPB2P08579 225 aaKnown RBP15.26■□□□□ 0.03
HERPUD1-201ENST00000300302 GPX3P22352 226 aa15.26■□□□□ 0.03
HERPUD1-201ENST00000300302 HTR1BP28222 390 aa15.26■□□□□ 0.03
HERPUD1-201ENST00000300302 MRPL19P49406 292 aaKnown RBP15.26■□□□□ 0.03
HERPUD1-201ENST00000300302 NUDT2P50583 147 aa15.26■□□□□ 0.03
HERPUD1-201ENST00000300302 CHIT1Q13231 466 aa15.26■□□□□ 0.03
HERPUD1-201ENST00000300302 NUMA1Q14980 2115 aa15.26■□□□□ 0.03
HERPUD1-201ENST00000300302 SMU1Q2TAY7 513 aa15.26■□□□□ 0.03
HERPUD1-201ENST00000300302 PYCR3Q53H96 274 aa15.26■□□□□ 0.03
HERPUD1-201ENST00000300302 C16orf89Q6UX73 402 aa15.26■□□□□ 0.03
HERPUD1-201ENST00000300302 KYQ8NBH2 561 aa15.26■□□□□ 0.03
HERPUD1-201ENST00000300302 MRPL1Q9BYD6 325 aaKnown RBP15.26■□□□□ 0.03
HERPUD1-201ENST00000300302 OSGEPL1Q9H4B0 414 aa15.26■□□□□ 0.03
HERPUD1-201ENST00000300302 AIG1Q9NVV5 245 aa15.26■□□□□ 0.03
HERPUD1-201ENST00000300302 CIDEBQ9UHD4 219 aa15.26■□□□□ 0.03
HERPUD1-201ENST00000300302 SUFUQ9UMX1 484 aa15.26■□□□□ 0.03
HERPUD1-201ENST00000300302 PSMD13Q9UNM6 376 aa15.26■□□□□ 0.03
HERPUD1-201ENST00000300302 GPSM3Q9Y4H4 160 aa15.26■□□□□ 0.03
HERPUD1-201ENST00000300302 KCNE2Q9Y6J6 123 aa15.26■□□□□ 0.03
HERPUD1-201ENST00000300302 KANSL1LA0AUZ9 987 aa15.25■□□□□ 0.03
HERPUD1-201ENST00000300302 POM121BA6NF01 834 aa15.25■□□□□ 0.03
HERPUD1-201ENST00000300302 LSM1O15116 133 aaKnown RBP15.25■□□□□ 0.03
HERPUD1-201ENST00000300302 LATO43561 262 aa15.25■□□□□ 0.03
HERPUD1-201ENST00000300302 FUCA1P04066 466 aa15.25■□□□□ 0.03
HERPUD1-201ENST00000300302 JUPP14923 745 aa15.25■□□□□ 0.03
HERPUD1-201ENST00000300302 GNAZP19086 355 aa15.25■□□□□ 0.03
HERPUD1-201ENST00000300302 OXTRP30559 389 aa15.25■□□□□ 0.03
HERPUD1-201ENST00000300302 CLDN2P57739 230 aa15.25■□□□□ 0.03
HERPUD1-201ENST00000300302 EMX2Q04743 252 aa15.25■□□□□ 0.03
HERPUD1-201ENST00000300302 PCDH1Q08174 1060 aa15.25■□□□□ 0.03
HERPUD1-201ENST00000300302 MAD2L1Q13257 205 aaPredicted RBP15.25■□□□□ 0.03
HERPUD1-201ENST00000300302 ART3Q13508 389 aa15.25■□□□□ 0.03
HERPUD1-201ENST00000300302 NFATC4Q14934 902 aa15.25■□□□□ 0.03
HERPUD1-201ENST00000300302 UBXN2BQ14CS0 331 aa15.25■□□□□ 0.03
HERPUD1-201ENST00000300302 MMEL1Q495T6 779 aa15.25■□□□□ 0.03
HERPUD1-201ENST00000300302 XKR6Q5GH73 641 aa15.25■□□□□ 0.03
HERPUD1-201ENST00000300302 ANO7Q6IWH7 933 aa15.25■□□□□ 0.03
HERPUD1-201ENST00000300302 GK5Q6ZS86 529 aa15.25■□□□□ 0.03
HERPUD1-201ENST00000300302 SFRP1Q8N474 314 aa15.25■□□□□ 0.03
HERPUD1-201ENST00000300302 PPFIBP2Q8ND30 876 aa15.25■□□□□ 0.03
HERPUD1-201ENST00000300302 FAM13CQ8NE31 585 aa15.25■□□□□ 0.03
HERPUD1-201ENST00000300302 TSTD1Q8NFU3 115 aa15.25■□□□□ 0.03
HERPUD1-201ENST00000300302 OR5K2Q8NHB8 316 aa15.25■□□□□ 0.03
HERPUD1-201ENST00000300302 RCN3Q96D15 328 aa15.25■□□□□ 0.03
HERPUD1-201ENST00000300302 SCARF2Q96GP6 870 aaPredicted RBP15.25■□□□□ 0.03
HERPUD1-201ENST00000300302 HBEGFQ99075 208 aa15.25■□□□□ 0.03
HERPUD1-201ENST00000300302 NELL2Q99435 816 aa15.25■□□□□ 0.03
HERPUD1-201ENST00000300302 THTPAQ9BU02 230 aa15.25■□□□□ 0.03
HERPUD1-201ENST00000300302 TRIT1Q9H3H1 467 aaKnown RBP15.25■□□□□ 0.03
HERPUD1-201ENST00000300302 GPR45Q9Y5Y3 372 aa15.25■□□□□ 0.03
HERPUD1-201ENST00000300302 KCNE1BA0A087WTH5 132 aa15.25■□□□□ 0.03
HERPUD1-201ENST00000300302 PRSS38A1L453 326 aa15.25■□□□□ 0.03
HERPUD1-201ENST00000300302 TOR1BO14657 336 aa15.25■□□□□ 0.03
HERPUD1-201ENST00000300302 WFS1O76024 890 aa15.25■□□□□ 0.03
HERPUD1-201ENST00000300302 APBB3O95704 486 aa15.25■□□□□ 0.03
HERPUD1-201ENST00000300302 ITGAXP20702 1163 aa15.25■□□□□ 0.03
HERPUD1-201ENST00000300302 CCND1P24385 295 aa15.25■□□□□ 0.03
HERPUD1-201ENST00000300302 RPL10P27635 214 aaKnown RBP15.25■□□□□ 0.03
HERPUD1-201ENST00000300302 HSD17B2P37059 387 aa15.25■□□□□ 0.03
HERPUD1-201ENST00000300302 HNF4AP41235 474 aa15.25■□□□□ 0.03
HERPUD1-201ENST00000300302 GNPDA1P46926 289 aa15.25■□□□□ 0.03
HERPUD1-201ENST00000300302 CLCNKAP51800 687 aa15.25■□□□□ 0.03
HERPUD1-201ENST00000300302 PNLIPRP1P54315 467 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms