RNA–Protein interactions for RNA: ENST00000297615.9

TTC39B-201, Transcript of tetratricopeptide repeat domain 39B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39B, Length 3,053 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-201ENST00000297615 GRM6O15303 877 aa13.2□□□□□ -0.3
TTC39B-201ENST00000297615 FZD6O60353 706 aa13.2□□□□□ -0.3
TTC39B-201ENST00000297615 PRKD3O94806 890 aa13.2□□□□□ -0.3
TTC39B-201ENST00000297615 HIST1H2AGP0C0S8 130 aaPredicted RBP13.2□□□□□ -0.3
TTC39B-201ENST00000297615 HIST1H2ADP20671 130 aa13.2□□□□□ -0.3
TTC39B-201ENST00000297615 DGKAP23743 735 aa13.2□□□□□ -0.3
TTC39B-201ENST00000297615 CDKN2CP42773 168 aa13.2□□□□□ -0.3
TTC39B-201ENST00000297615 VAC14Q08AM6 782 aa13.2□□□□□ -0.3
TTC39B-201ENST00000297615 SMARCB1Q12824 385 aa13.2□□□□□ -0.3
TTC39B-201ENST00000297615 TRAF3Q13114 568 aa13.2□□□□□ -0.3
TTC39B-201ENST00000297615 RAB39AQ14964 217 aa13.2□□□□□ -0.3
TTC39B-201ENST00000297615 MPPE1Q53F39 396 aa13.2□□□□□ -0.3
TTC39B-201ENST00000297615 CYBRD1Q53TN4 286 aa13.2□□□□□ -0.3
TTC39B-201ENST00000297615 AARS2Q5JTZ9 985 aaKnown RBP13.2□□□□□ -0.3
TTC39B-201ENST00000297615 HACD2Q6Y1H2 254 aa13.2□□□□□ -0.3
TTC39B-201ENST00000297615 ZNF621Q6ZSS3 439 aa13.2□□□□□ -0.3
TTC39B-201ENST00000297615 SLC44A2Q8IWA5 706 aaPredicted RBP13.2□□□□□ -0.3
TTC39B-201ENST00000297615 TCEAL8Q8IYN2 117 aa13.2□□□□□ -0.3
TTC39B-201ENST00000297615 OR7A2PQ8NGA2 310 aa13.2□□□□□ -0.3
TTC39B-201ENST00000297615 RNF217Q8TC41 542 aa13.2□□□□□ -0.3
TTC39B-201ENST00000297615 C2orf15Q8WU43 125 aaKnown RBP13.2□□□□□ -0.3
TTC39B-201ENST00000297615 SDCCAG3Q96C92 435 aa13.2□□□□□ -0.3
TTC39B-201ENST00000297615 FBXL8Q96CD0 374 aa13.2□□□□□ -0.3
TTC39B-201ENST00000297615 HIST1H2AHQ96KK5 128 aa13.2□□□□□ -0.3
TTC39B-201ENST00000297615 ZBTB18Q99592 522 aa13.2□□□□□ -0.3
TTC39B-201ENST00000297615 HIST1H2AJQ99878 128 aa13.2□□□□□ -0.3
TTC39B-201ENST00000297615 H2AFJQ9BTM1 129 aa13.2□□□□□ -0.3
TTC39B-201ENST00000297615 BDH2Q9BUT1 245 aa13.2□□□□□ -0.3
TTC39B-201ENST00000297615 P2RY12Q9H244 342 aa13.2□□□□□ -0.3
TTC39B-201ENST00000297615 SLC52A3Q9NQ40 469 aa13.2□□□□□ -0.3
TTC39B-201ENST00000297615 GPRC5BQ9NZH0 403 aa13.2□□□□□ -0.3
TTC39B-201ENST00000297615 IFT80Q9P2H3 777 aaPredicted RBP13.2□□□□□ -0.3
TTC39B-201ENST00000297615 COL6A3P12111 3177 aa13.2□□□□□ -0.3
TTC39B-201ENST00000297615 TSPAN6O43657 245 aa13.19□□□□□ -0.3
TTC39B-201ENST00000297615 EEDO75530 441 aaKnown RBP13.19□□□□□ -0.3
TTC39B-201ENST00000297615 ZNF182P17025 639 aaPredicted RBP13.19□□□□□ -0.3
TTC39B-201ENST00000297615 ALDH4A1P30038 563 aa13.19□□□□□ -0.3
TTC39B-201ENST00000297615 SHMT2P34897 504 aa13.19□□□□□ -0.3
TTC39B-201ENST00000297615 RPL26P61254 145 aaKnown RBP13.19□□□□□ -0.3
TTC39B-201ENST00000297615 ATP6AP1Q15904 470 aa13.19□□□□□ -0.3
TTC39B-201ENST00000297615 MEP1AQ16819 746 aa13.19□□□□□ -0.3
TTC39B-201ENST00000297615 AASDHQ4L235 1098 aaPredicted RBP13.19□□□□□ -0.3
TTC39B-201ENST00000297615 NEK5Q6P3R8 708 aa13.19□□□□□ -0.3
TTC39B-201ENST00000297615 TRAPPC5Q8IUR0 188 aa13.19□□□□□ -0.3
TTC39B-201ENST00000297615 CCDC138Q96M89 665 aa13.19□□□□□ -0.3
TTC39B-201ENST00000297615 MAGEE1Q9HCI5 957 aa13.19□□□□□ -0.3
TTC39B-201ENST00000297615 CNOT11Q9UKZ1 510 aaKnown RBP13.19□□□□□ -0.3
TTC39B-201ENST00000297615 IFRD1O00458 451 aaPredicted RBP13.19□□□□□ -0.3
TTC39B-201ENST00000297615 PRAMEF4O60810 478 aa13.19□□□□□ -0.3
TTC39B-201ENST00000297615 TNFRSF1BP20333 461 aa13.19□□□□□ -0.3
TTC39B-201ENST00000297615 MAP4P27816 1152 aaKnown RBP13.19□□□□□ -0.3
TTC39B-201ENST00000297615 CAPGP40121 348 aa13.19□□□□□ -0.3
TTC39B-201ENST00000297615 CYP4F2P78329 520 aa13.19□□□□□ -0.3
TTC39B-201ENST00000297615 CHIT1Q13231 466 aa13.19□□□□□ -0.3
TTC39B-201ENST00000297615 DCTN2Q13561 401 aaKnown RBP13.19□□□□□ -0.3
TTC39B-201ENST00000297615 INO80DQ53TQ3 878 aaPredicted RBP13.19□□□□□ -0.3
TTC39B-201ENST00000297615 PRAMEF9Q5VWM5 478 aa13.19□□□□□ -0.3
TTC39B-201ENST00000297615 C11orf96Q7Z7L8 435 aa13.19□□□□□ -0.3
TTC39B-201ENST00000297615 ADAMTSL2Q86TH1 951 aa13.19□□□□□ -0.3
TTC39B-201ENST00000297615 ZFAND4Q86XD8 727 aa13.19□□□□□ -0.3
TTC39B-201ENST00000297615 GAB3Q8WWW8 586 aa13.19□□□□□ -0.3
TTC39B-201ENST00000297615 RHBDF1Q96CC6 855 aa13.19□□□□□ -0.3
TTC39B-201ENST00000297615 SLC25A13Q9UJS0 675 aa13.19□□□□□ -0.3
TTC39B-201ENST00000297615 DOLKQ9UPQ8 538 aa13.19□□□□□ -0.3
TTC39B-201ENST00000297615 LSM1O15116 133 aaKnown RBP13.19□□□□□ -0.3
TTC39B-201ENST00000297615 VPS4BO75351 444 aa13.19□□□□□ -0.3
TTC39B-201ENST00000297615 RASAL1O95294 804 aa13.19□□□□□ -0.3
TTC39B-201ENST00000297615 GPIP06744 558 aa13.19□□□□□ -0.3
TTC39B-201ENST00000297615 C1SP09871 688 aa13.19□□□□□ -0.3
TTC39B-201ENST00000297615 SPTBP11277 2137 aa13.19□□□□□ -0.3
TTC39B-201ENST00000297615 HOXB8P17481 243 aaPredicted RBP13.19□□□□□ -0.3
TTC39B-201ENST00000297615 LAG3P18627 525 aa13.19□□□□□ -0.3
TTC39B-201ENST00000297615 PAX3P23760 479 aa13.19□□□□□ -0.3
TTC39B-201ENST00000297615 NKG7Q16617 165 aa13.19□□□□□ -0.3
TTC39B-201ENST00000297615 SLC36A3Q495N2 470 aa13.19□□□□□ -0.3
TTC39B-201ENST00000297615 FAM98BQ52LJ0 330 aaKnown RBP13.19□□□□□ -0.3
TTC39B-201ENST00000297615 XKR7Q5GH72 579 aa13.19□□□□□ -0.3
TTC39B-201ENST00000297615 TXNDC11Q6PKC3 985 aa13.19□□□□□ -0.3
TTC39B-201ENST00000297615 USP45Q70EL2 814 aa13.19□□□□□ -0.3
TTC39B-201ENST00000297615 CFAP206Q8IYR0 622 aa13.19□□□□□ -0.3
TTC39B-201ENST00000297615 OR2A12Q8NGT7 310 aa13.19□□□□□ -0.3
TTC39B-201ENST00000297615 FAM81AQ8TBF8 368 aa13.19□□□□□ -0.3
TTC39B-201ENST00000297615 FRS2Q8WU20 508 aa13.19□□□□□ -0.3
TTC39B-201ENST00000297615 SLC13A3Q8WWT9 602 aa13.19□□□□□ -0.3
TTC39B-201ENST00000297615 OGDHLQ9ULD0 1010 aa13.19□□□□□ -0.3
TTC39B-201ENST00000297615 MRPS23Q9Y3D9 190 aaKnown RBP13.19□□□□□ -0.3
TTC39B-201ENST00000297615 hCG_2039718K7EN88 272 aa13.18□□□□□ -0.3
TTC39B-201ENST00000297615 MMP20O60882 483 aa13.18□□□□□ -0.3
TTC39B-201ENST00000297615 CXCL10P02778 98 aa13.18□□□□□ -0.3
TTC39B-201ENST00000297615 SERPIND1P05546 499 aa13.18□□□□□ -0.3
TTC39B-201ENST00000297615 AGXTP21549 392 aa13.18□□□□□ -0.3
TTC39B-201ENST00000297615 CDK9P50750 372 aaKnown RBP13.18□□□□□ -0.3
TTC39B-201ENST00000297615 SIM2Q14190 667 aaPredicted RBP13.18□□□□□ -0.3
TTC39B-201ENST00000297615 XKR6Q5GH73 641 aa13.18□□□□□ -0.3
TTC39B-201ENST00000297615 DLEU7Q6UYE1 221 aa13.18□□□□□ -0.3
TTC39B-201ENST00000297615 CCDC81Q6ZN84 652 aa13.18□□□□□ -0.3
TTC39B-201ENST00000297615 ZDHHC13Q8IUH4 622 aa13.18□□□□□ -0.3
TTC39B-201ENST00000297615 SYTL1Q8IYJ3 562 aa13.18□□□□□ -0.3
TTC39B-201ENST00000297615 TBC1D21Q8IYX1 336 aa13.18□□□□□ -0.3
TTC39B-201ENST00000297615 CLECL1Q8IZS7 167 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms