RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 DHFR2Q86XF0 187 aa8.91□□□□□ -0.98
PDPN-201ENST00000294489 CHPFQ8IZ52 775 aa8.91□□□□□ -0.98
PDPN-201ENST00000294489 ATL1Q8WXF7 558 aa8.91□□□□□ -0.98
PDPN-201ENST00000294489 ZNF514Q96K75 400 aaPredicted RBP8.91□□□□□ -0.98
PDPN-201ENST00000294489 FOPNLQ96NB1 174 aa8.91□□□□□ -0.98
PDPN-201ENST00000294489 TRIM15Q9C019 465 aa8.91□□□□□ -0.98
PDPN-201ENST00000294489 ELOVL6Q9H5J4 265 aa8.91□□□□□ -0.98
PDPN-201ENST00000294489 ZDHHC4Q9NPG8 344 aa8.91□□□□□ -0.98
PDPN-201ENST00000294489 DNAJC11Q9NVH1 559 aa8.91□□□□□ -0.98
PDPN-201ENST00000294489 ZNHIT2Q9UHR6 403 aa8.91□□□□□ -0.98
PDPN-201ENST00000294489 POLR3HQ9Y535 204 aaPredicted RBP8.91□□□□□ -0.98
PDPN-201ENST00000294489 C15orf38-AP3S2A0A0A6YYH1 394 aa8.9□□□□□ -0.98
PDPN-201ENST00000294489 TMEM202A6NGA9 273 aa8.9□□□□□ -0.98
PDPN-201ENST00000294489 PEX1O43933 1283 aa8.9□□□□□ -0.98
PDPN-201ENST00000294489 SEC22BO75396 215 aa8.9□□□□□ -0.98
PDPN-201ENST00000294489 CATP04040 527 aaKnown RBP8.9□□□□□ -0.98
PDPN-201ENST00000294489 SLC6A2P23975 617 aa8.9□□□□□ -0.98
PDPN-201ENST00000294489 PEX2P28328 305 aa8.9□□□□□ -0.98
PDPN-201ENST00000294489 CASP2P42575 452 aa8.9□□□□□ -0.98
PDPN-201ENST00000294489 KLC1Q07866 573 aa8.9□□□□□ -0.98
PDPN-201ENST00000294489 BNIP2Q12982 314 aa8.9□□□□□ -0.98
PDPN-201ENST00000294489 CAPRIN1Q14444 709 aaKnown RBP8.9□□□□□ -0.98
PDPN-201ENST00000294489 GRAMD1BQ3KR37 738 aa8.9□□□□□ -0.98
PDPN-201ENST00000294489 GGTA1PQ4G0N0 100 aa8.9□□□□□ -0.98
PDPN-201ENST00000294489 ARPINQ7Z6K5 226 aa8.9□□□□□ -0.98
PDPN-201ENST00000294489 EGFL6Q8IUX8 553 aa8.9□□□□□ -0.98
PDPN-201ENST00000294489 SLC15A3Q8IY34 581 aa8.9□□□□□ -0.98
PDPN-201ENST00000294489 CATSPER1Q8NEC5 780 aa8.9□□□□□ -0.98
PDPN-201ENST00000294489 ASB12Q8WXK4 309 aa8.9□□□□□ -0.98
PDPN-201ENST00000294489 USP7Q93009 1102 aa8.9□□□□□ -0.98
PDPN-201ENST00000294489 FBXL8Q96CD0 374 aa8.9□□□□□ -0.98
PDPN-201ENST00000294489 LRCH3Q96II8 777 aa8.9□□□□□ -0.98
PDPN-201ENST00000294489 EFHD1Q9BUP0 239 aa8.9□□□□□ -0.98
PDPN-201ENST00000294489 TEX101Q9BY14 249 aa8.9□□□□□ -0.98
PDPN-201ENST00000294489 LRTM1Q9HBL6 345 aa8.9□□□□□ -0.98
PDPN-201ENST00000294489 SERGEFQ9UGK8 458 aa8.9□□□□□ -0.98
PDPN-201ENST00000294489 SCML1Q9UN30 329 aa8.9□□□□□ -0.98
PDPN-201ENST00000294489 CCL27Q9Y4X3 112 aa8.9□□□□□ -0.98
PDPN-201ENST00000294489 ANKRD12Q6UB98 2062 aa8.9□□□□□ -0.98
PDPN-201ENST00000294489 SERTM1A2A2V5 107 aa8.9□□□□□ -0.98
PDPN-201ENST00000294489 FXYD1O00168 92 aa8.9□□□□□ -0.98
PDPN-201ENST00000294489 NME4O00746 187 aa8.9□□□□□ -0.98
PDPN-201ENST00000294489 C8BP07358 591 aa8.9□□□□□ -0.98
PDPN-201ENST00000294489 HSD17B1P14061 328 aa8.9□□□□□ -0.98
PDPN-201ENST00000294489 EPORP19235 508 aa8.9□□□□□ -0.98
PDPN-201ENST00000294489 JAK1P23458 1154 aa8.9□□□□□ -0.98
PDPN-201ENST00000294489 TIE1P35590 1138 aa8.9□□□□□ -0.98
PDPN-201ENST00000294489 TRIM23P36406 574 aa8.9□□□□□ -0.98
PDPN-201ENST00000294489 GPR1P46091 355 aa8.9□□□□□ -0.98
PDPN-201ENST00000294489 ZFP36L2P47974 494 aaKnown RBP8.9□□□□□ -0.98
PDPN-201ENST00000294489 ABRQ12979 859 aa8.9□□□□□ -0.98
PDPN-201ENST00000294489 TMEM259Q4ZIN3 620 aa8.9□□□□□ -0.98
PDPN-201ENST00000294489 RAET1GQ6H3X3 334 aa8.9□□□□□ -0.98
PDPN-201ENST00000294489 IRGCQ6NXR0 463 aa8.9□□□□□ -0.98
PDPN-201ENST00000294489 TRMT11Q7Z4G4 463 aaKnown RBP8.9□□□□□ -0.98
PDPN-201ENST00000294489 C11orf96Q7Z7L8 435 aa8.9□□□□□ -0.98
PDPN-201ENST00000294489 ZNF547Q8IVP9 402 aa8.9□□□□□ -0.98
PDPN-201ENST00000294489 SELENOMQ8WWX9 145 aa8.9□□□□□ -0.98
PDPN-201ENST00000294489 PYCR2Q96C36 320 aa8.9□□□□□ -0.98
PDPN-201ENST00000294489 HIC2Q96JB3 615 aa8.9□□□□□ -0.98
PDPN-201ENST00000294489 C1QTNF2Q9BXJ5 285 aa8.9□□□□□ -0.98
PDPN-201ENST00000294489 COPS7BQ9H9Q2 264 aaPredicted RBP8.9□□□□□ -0.98
PDPN-201ENST00000294489 KCNK12Q9HB15 430 aa8.9□□□□□ -0.98
PDPN-201ENST00000294489 FARSBQ9NSD9 589 aaKnown RBP8.9□□□□□ -0.98
PDPN-201ENST00000294489 ZFR2Q9UPR6 939 aaKnown RBP8.9□□□□□ -0.98
PDPN-201ENST00000294489 SLC22A14Q9Y267 594 aa8.9□□□□□ -0.98
PDPN-201ENST00000294489 AP4S1Q9Y587 144 aa8.9□□□□□ -0.98
PDPN-201ENST00000294489 LIN7AO14910 233 aaPredicted RBP8.89□□□□□ -0.99
PDPN-201ENST00000294489 COL9A1P20849 921 aa8.89□□□□□ -0.99
PDPN-201ENST00000294489 IL12AP29459 219 aa8.89□□□□□ -0.99
PDPN-201ENST00000294489 HMGCS1Q01581 520 aa8.89□□□□□ -0.99
PDPN-201ENST00000294489 GTF2H3Q13889 308 aa8.89□□□□□ -0.99
PDPN-201ENST00000294489 PAGE3Q5JUK9 113 aa8.89□□□□□ -0.99
PDPN-201ENST00000294489 C6orf10Q5SRN2 563 aa8.89□□□□□ -0.99
PDPN-201ENST00000294489 OGFRL1Q5TC84 451 aaPredicted RBP8.89□□□□□ -0.99
PDPN-201ENST00000294489 PRR23BQ6ZRT6 265 aa8.89□□□□□ -0.99
PDPN-201ENST00000294489 PDSS2Q86YH6 399 aa8.89□□□□□ -0.99
PDPN-201ENST00000294489 RGL4Q8IZJ4 473 aa8.89□□□□□ -0.99
PDPN-201ENST00000294489 L3MBTL4Q8NA19 623 aa8.89□□□□□ -0.99
PDPN-201ENST00000294489 TP53I13Q8NBR0 393 aaPredicted RBP8.89□□□□□ -0.99
PDPN-201ENST00000294489 PLA2G15Q8NCC3 412 aa8.89□□□□□ -0.99
PDPN-201ENST00000294489 GLB1L3Q8NCI6 653 aaPredicted RBP8.89□□□□□ -0.99
PDPN-201ENST00000294489 ICA1LQ8NDH6 482 aa8.89□□□□□ -0.99
PDPN-201ENST00000294489 DNAJB14Q8TBM8 379 aa8.89□□□□□ -0.99
PDPN-201ENST00000294489 CCDC138Q96M89 665 aa8.89□□□□□ -0.99
PDPN-201ENST00000294489 ATG10Q9H0Y0 220 aa8.89□□□□□ -0.99
PDPN-201ENST00000294489 C1orf109Q9NX04 203 aa8.89□□□□□ -0.99
PDPN-201ENST00000294489 ATXN10Q9UBB4 475 aa8.89□□□□□ -0.99
PDPN-201ENST00000294489 FZD4Q9ULV1 537 aa8.89□□□□□ -0.99
PDPN-201ENST00000294489 DNMT3AQ9Y6K1 912 aaPredicted RBP8.89□□□□□ -0.99
PDPN-201ENST00000294489 PRSS51A0A1B0GVH4 220 aa8.89□□□□□ -0.99
PDPN-201ENST00000294489 IGLON5A6NGN9 336 aa8.89□□□□□ -0.99
PDPN-201ENST00000294489 GPR89AB7ZAQ6 455 aa8.89□□□□□ -0.99
PDPN-201ENST00000294489 GPR89BP0CG08 455 aa8.89□□□□□ -0.99
PDPN-201ENST00000294489 SEC13P55735 322 aa8.89□□□□□ -0.99
PDPN-201ENST00000294489 PON2Q15165 354 aa8.89□□□□□ -0.99
PDPN-201ENST00000294489 TLR1Q15399 786 aa8.89□□□□□ -0.99
PDPN-201ENST00000294489 WSCD2Q2TBF2 565 aa8.89□□□□□ -0.99
PDPN-201ENST00000294489 KIAA1161Q6NSJ0 714 aa8.89□□□□□ -0.99
PDPN-201ENST00000294489 NEK5Q6P3R8 708 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms