RNA–Protein interactions for RNA: ENST00000254941.6

NIP7-202, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 1 (best) BASIC

Gene NIP7, Length 1,887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-202ENST00000254941 NAE1Q13564 534 aa9.19□□□□□ -0.94
NIP7-202ENST00000254941 PTK2BQ14289 1009 aa9.19□□□□□ -0.94
NIP7-202ENST00000254941 GRB7Q14451 532 aa9.19□□□□□ -0.94
NIP7-202ENST00000254941 KRT72Q14CN4 511 aa9.19□□□□□ -0.94
NIP7-202ENST00000254941 ALG11Q2TAA5 492 aa9.19□□□□□ -0.94
NIP7-202ENST00000254941 FAM219BQ5XKK7 198 aa9.19□□□□□ -0.94
NIP7-202ENST00000254941 CWF19L1Q69YN2 538 aaKnown RBP9.19□□□□□ -0.94
NIP7-202ENST00000254941 LARP4Q71RC2 724 aaKnown RBP eCLIP9.19□□□□□ -0.94
NIP7-202ENST00000254941 TBC1D21Q8IYX1 336 aa9.19□□□□□ -0.94
NIP7-202ENST00000254941 PHC3Q8NDX5 983 aa9.19□□□□□ -0.94
NIP7-202ENST00000254941 METTL6Q8TCB7 284 aa9.19□□□□□ -0.94
NIP7-202ENST00000254941 SNX19Q92543 992 aa9.19□□□□□ -0.94
NIP7-202ENST00000254941 SPACA7Q96KW9 195 aa9.19□□□□□ -0.94
NIP7-202ENST00000254941 C3orf30Q96M34 536 aa9.19□□□□□ -0.94
NIP7-202ENST00000254941 CCDC106Q9BWC9 280 aa9.19□□□□□ -0.94
NIP7-202ENST00000254941 OCEL1Q9H607 264 aa9.19□□□□□ -0.94
NIP7-202ENST00000254941 PFDN4Q9NQP4 134 aa9.19□□□□□ -0.94
NIP7-202ENST00000254941 TRNAU1APQ9NX07 287 aaKnown RBP9.19□□□□□ -0.94
NIP7-202ENST00000254941 CIDEBQ9UHD4 219 aa9.19□□□□□ -0.94
NIP7-202ENST00000254941 SLC12A4Q9UP95 1085 aa9.19□□□□□ -0.94
NIP7-202ENST00000254941 CFAP20Q9Y6A4 193 aaKnown RBP9.19□□□□□ -0.94
NIP7-202ENST00000254941 WDFY4Q6ZS81 3184 aa9.18□□□□□ -0.94
NIP7-202ENST00000254941 CACNA1EQ15878 2313 aa9.18□□□□□ -0.94
NIP7-202ENST00000254941 SPTY2D1-AS1A0A0U1RR47 76 aa9.18□□□□□ -0.94
NIP7-202ENST00000254941 ATP6AP2A0A1C7CYW4 349 aa9.18□□□□□ -0.94
NIP7-202ENST00000254941 E7ENX8 843 aa9.18□□□□□ -0.94
NIP7-202ENST00000254941 PIP5K1BO14986 540 aa9.18□□□□□ -0.94
NIP7-202ENST00000254941 PI15O43692 258 aa9.18□□□□□ -0.94
NIP7-202ENST00000254941 ATP6AP2O75787 350 aa9.18□□□□□ -0.94
NIP7-202ENST00000254941 CLDN9O95484 217 aa9.18□□□□□ -0.94
NIP7-202ENST00000254941 THEGLP0DJG4 465 aa9.18□□□□□ -0.94
NIP7-202ENST00000254941 T-ENOLP0DO92 83 aa9.18□□□□□ -0.94
NIP7-202ENST00000254941 ERGP11308 486 aa9.18□□□□□ -0.94
NIP7-202ENST00000254941 HGFP14210 728 aa9.18□□□□□ -0.94
NIP7-202ENST00000254941 NCF2P19878 526 aaPredicted RBP9.18□□□□□ -0.94
NIP7-202ENST00000254941 ITPKAP23677 461 aa9.18□□□□□ -0.94
NIP7-202ENST00000254941 HOXA6P31267 233 aa9.18□□□□□ -0.94
NIP7-202ENST00000254941 ARL1P40616 181 aaPredicted RBP9.18□□□□□ -0.94
NIP7-202ENST00000254941 CTBSQ01459 385 aa9.18□□□□□ -0.94
NIP7-202ENST00000254941 RPL6Q02878 288 aaKnown RBP9.18□□□□□ -0.94
NIP7-202ENST00000254941 TAP2Q03519 686 aa9.18□□□□□ -0.94
NIP7-202ENST00000254941 PCDH1Q08174 1060 aa9.18□□□□□ -0.94
NIP7-202ENST00000254941 ARHGAP19Q14CB8 494 aa9.18□□□□□ -0.94
NIP7-202ENST00000254941 CLCA4Q14CN2 919 aa9.18□□□□□ -0.94
NIP7-202ENST00000254941 TBCCQ15814 346 aa9.18□□□□□ -0.94
NIP7-202ENST00000254941 UAP1L1Q3KQV9 507 aa9.18□□□□□ -0.94
NIP7-202ENST00000254941 GGTA1PQ4G0N0 100 aa9.18□□□□□ -0.94
NIP7-202ENST00000254941 USP39Q53GS9 565 aaKnown RBP9.18□□□□□ -0.94
NIP7-202ENST00000254941 NXNQ6DKJ4 435 aa9.18□□□□□ -0.94
NIP7-202ENST00000254941 ABRAXAS1Q6UWZ7 409 aa9.18□□□□□ -0.94
NIP7-202ENST00000254941 WASH2PQ6VEQ5 465 aa9.18□□□□□ -0.94
NIP7-202ENST00000254941 RNF165Q6ZSG1 346 aa9.18□□□□□ -0.94
NIP7-202ENST00000254941 THOC6Q86W42 341 aaKnown RBP9.18□□□□□ -0.94
NIP7-202ENST00000254941 LRRC56Q8IYG6 542 aaPredicted RBP9.18□□□□□ -0.94
NIP7-202ENST00000254941 SYTL1Q8IYJ3 562 aa9.18□□□□□ -0.94
NIP7-202ENST00000254941 SNX31Q8N9S9 440 aa9.18□□□□□ -0.94
NIP7-202ENST00000254941 C12orf66Q96MD2 445 aa9.18□□□□□ -0.94
NIP7-202ENST00000254941 OR4K3Q96R72 315 aa9.18□□□□□ -0.94
NIP7-202ENST00000254941 INSM2Q96T92 566 aaPredicted RBP9.18□□□□□ -0.94
NIP7-202ENST00000254941 SGPP1Q9BX95 441 aa9.18□□□□□ -0.94
NIP7-202ENST00000254941 TRIT1Q9H3H1 467 aaKnown RBP9.18□□□□□ -0.94
NIP7-202ENST00000254941 WASH6PQ9NQA3 447 aa9.18□□□□□ -0.94
NIP7-202ENST00000254941 ARMCX1Q9P291 453 aa9.18□□□□□ -0.94
NIP7-202ENST00000254941 TRPS1Q9UHF7 1281 aa9.18□□□□□ -0.94
NIP7-202ENST00000254941 PCOLCE2Q9UKZ9 415 aa9.18□□□□□ -0.94
NIP7-202ENST00000254941 INVSQ9Y283 1065 aa9.18□□□□□ -0.94
NIP7-202ENST00000254941 RNF11Q9Y3C5 154 aa9.18□□□□□ -0.94
NIP7-202ENST00000254941 SLCO1B1Q9Y6L6 691 aa9.18□□□□□ -0.94
NIP7-202ENST00000254941 CCDC163A0A0D9SF12 145 aa9.17□□□□□ -0.94
NIP7-202ENST00000254941 UGDHO60701 494 aa9.17□□□□□ -0.94
NIP7-202ENST00000254941 VPS4BO75351 444 aa9.17□□□□□ -0.94
NIP7-202ENST00000254941 WFS1O76024 890 aa9.17□□□□□ -0.94
NIP7-202ENST00000254941 UNC5CO95185 931 aa9.17□□□□□ -0.94
NIP7-202ENST00000254941 PDGFBP01127 241 aaPredicted RBP9.17□□□□□ -0.94
NIP7-202ENST00000254941 LINC00032P0C843 101 aa9.17□□□□□ -0.94
NIP7-202ENST00000254941 AOC1P19801 751 aa9.17□□□□□ -0.94
NIP7-202ENST00000254941 PNLIPRP1P54315 467 aa9.17□□□□□ -0.94
NIP7-202ENST00000254941 UBAP2LQ14157 1087 aaKnown RBP9.17□□□□□ -0.94
NIP7-202ENST00000254941 XKR7Q5GH72 579 aa9.17□□□□□ -0.94
NIP7-202ENST00000254941 SLC36A4Q6YBV0 504 aa9.17□□□□□ -0.94
NIP7-202ENST00000254941 CHSY3Q70JA7 882 aa9.17□□□□□ -0.94
NIP7-202ENST00000254941 RD3Q7Z3Z2 195 aa9.17□□□□□ -0.94
NIP7-202ENST00000254941 DCP2Q8IU60 420 aaKnown RBP9.17□□□□□ -0.94
NIP7-202ENST00000254941 HID1Q8IV36 788 aa9.17□□□□□ -0.94
NIP7-202ENST00000254941 DDIASQ8IXT1 998 aa9.17□□□□□ -0.94
NIP7-202ENST00000254941 RGL4Q8IZJ4 473 aa9.17□□□□□ -0.94
NIP7-202ENST00000254941 L3MBTL4Q8NA19 623 aa9.17□□□□□ -0.94
NIP7-202ENST00000254941 PPFIBP2Q8ND30 876 aa9.17□□□□□ -0.94
NIP7-202ENST00000254941 EDAQ92838 391 aa9.17□□□□□ -0.94
NIP7-202ENST00000254941 MED8Q96G25 268 aa9.17□□□□□ -0.94
NIP7-202ENST00000254941 KLHDC7BQ96G42 594 aa9.17□□□□□ -0.94
NIP7-202ENST00000254941 MAGEB10Q96LZ2 347 aaPredicted RBP9.17□□□□□ -0.94
NIP7-202ENST00000254941 SLC6A18Q96N87 628 aa9.17□□□□□ -0.94
NIP7-202ENST00000254941 NECAB3Q96P71 396 aaPredicted RBP9.17□□□□□ -0.94
NIP7-202ENST00000254941 MENTQ9BUN1 341 aa9.17□□□□□ -0.94
NIP7-202ENST00000254941 SLC29A3Q9BZD2 475 aa9.17□□□□□ -0.94
NIP7-202ENST00000254941 TMEM168Q9H0V1 697 aa9.17□□□□□ -0.94
NIP7-202ENST00000254941 ZNF385DQ9H6B1 395 aa9.17□□□□□ -0.94
NIP7-202ENST00000254941 AKTIPQ9H8T0 292 aa9.17□□□□□ -0.94
NIP7-202ENST00000254941 ACTR8Q9H981 624 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms