RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 H2AFJQ9BTM1 129 aa13.67□□□□□ -0.22
VPS25-201ENST00000253794 STMN4Q9H169 189 aaPredicted RBP13.67□□□□□ -0.22
VPS25-201ENST00000253794 ALG9Q9H6U8 611 aa13.67□□□□□ -0.22
VPS25-201ENST00000253794 TMBIM4Q9HC24 238 aa13.67□□□□□ -0.22
VPS25-201ENST00000253794 ZNF358Q9NW07 568 aa13.67□□□□□ -0.22
VPS25-201ENST00000253794 NUDT4Q9NZJ9 180 aa13.67□□□□□ -0.22
VPS25-201ENST00000253794 STOX2Q9P2F5 926 aaPredicted RBP13.67□□□□□ -0.22
VPS25-201ENST00000253794 LNPEPQ9UIQ6 1025 aa13.67□□□□□ -0.22
VPS25-201ENST00000253794 SYCE1LA8MT33 242 aa13.66□□□□□ -0.22
VPS25-201ENST00000253794 FOXO6A8MYZ6 492 aa13.66□□□□□ -0.22
VPS25-201ENST00000253794 E7ENX8 843 aa13.66□□□□□ -0.22
VPS25-201ENST00000253794 BTN3A3O00478 584 aa13.66□□□□□ -0.22
VPS25-201ENST00000253794 SASH3O75995 380 aa13.66□□□□□ -0.22
VPS25-201ENST00000253794 FKBP9O95302 570 aa13.66□□□□□ -0.22
VPS25-201ENST00000253794 CPNE6O95741 557 aa13.66□□□□□ -0.22
VPS25-201ENST00000253794 TOP3BO95985 862 aaKnown RBP13.66□□□□□ -0.22
VPS25-201ENST00000253794 RPLP0P05388 317 aaKnown RBP13.66□□□□□ -0.22
VPS25-201ENST00000253794 SBK3P0C264 359 aa13.66□□□□□ -0.22
VPS25-201ENST00000253794 FTH1P19P0C7X4 201 aa13.66□□□□□ -0.22
VPS25-201ENST00000253794 MTHFD2P13995 350 aa13.66□□□□□ -0.22
VPS25-201ENST00000253794 ALDH4A1P30038 563 aa13.66□□□□□ -0.22
VPS25-201ENST00000253794 GGT5P36269 586 aa13.66□□□□□ -0.22
VPS25-201ENST00000253794 CCT5P48643 541 aa13.66□□□□□ -0.22
VPS25-201ENST00000253794 NOVA1P51513 510 aaKnown RBP13.66□□□□□ -0.22
VPS25-201ENST00000253794 PNLIPRP1P54315 467 aa13.66□□□□□ -0.22
VPS25-201ENST00000253794 CCL7P80098 99 aa13.66□□□□□ -0.22
VPS25-201ENST00000253794 TAP2Q03519 686 aa13.66□□□□□ -0.22
VPS25-201ENST00000253794 CFHR1Q03591 330 aa13.66□□□□□ -0.22
VPS25-201ENST00000253794 KIR2DS3Q14952 304 aa13.66□□□□□ -0.22
VPS25-201ENST00000253794 ZXDCQ2QGD7 858 aaPredicted RBP13.66□□□□□ -0.22
VPS25-201ENST00000253794 CDCP2Q5VXM1 449 aa13.66□□□□□ -0.22
VPS25-201ENST00000253794 FRA10AC1Q70Z53 315 aa13.66□□□□□ -0.22
VPS25-201ENST00000253794 SLCO6A1Q86UG4 719 aa13.66□□□□□ -0.22
VPS25-201ENST00000253794 SRRM1Q8IYB3 904 aaKnown RBP13.66□□□□□ -0.22
VPS25-201ENST00000253794 TCAIMQ8N3R3 496 aa13.66□□□□□ -0.22
VPS25-201ENST00000253794 OR4E2Q8NGC2 313 aa13.66□□□□□ -0.22
VPS25-201ENST00000253794 OR56A3Q8NH54 315 aa13.66□□□□□ -0.22
VPS25-201ENST00000253794 FLVCR1-AS1Q8TAF5 88 aa13.66□□□□□ -0.22
VPS25-201ENST00000253794 TLCD1Q96CP7 247 aa13.66□□□□□ -0.22
VPS25-201ENST00000253794 APOPT1Q96IL0 206 aa13.66□□□□□ -0.22
VPS25-201ENST00000253794 CD180Q99467 661 aa13.66□□□□□ -0.22
VPS25-201ENST00000253794 UNKQ9C0B0 810 aaKnown RBP13.66□□□□□ -0.22
VPS25-201ENST00000253794 MRPL46Q9H2W6 279 aaKnown RBP13.66□□□□□ -0.22
VPS25-201ENST00000253794 ZNF446Q9NWS9 450 aa13.66□□□□□ -0.22
VPS25-201ENST00000253794 ARL15Q9NXU5 204 aa13.66□□□□□ -0.22
VPS25-201ENST00000253794 SEMA5BQ9P283 1151 aa13.66□□□□□ -0.22
VPS25-201ENST00000253794 GRID1Q9ULK0 1009 aa13.66□□□□□ -0.22
VPS25-201ENST00000253794 RNF112Q9ULX5 631 aa13.66□□□□□ -0.22
VPS25-201ENST00000253794 TMCO1Q9UM00 188 aa13.66□□□□□ -0.22
VPS25-201ENST00000253794 PLAGL1Q9UM63 463 aa13.66□□□□□ -0.22
VPS25-201ENST00000253794 APOBEC2Q9Y235 224 aaKnown RBP13.66□□□□□ -0.22
VPS25-201ENST00000253794 CNOT1A5YKK6 2376 aaKnown RBP13.66□□□□□ -0.22
VPS25-201ENST00000253794 COL27A1Q8IZC6 1860 aaPredicted RBP13.65□□□□□ -0.22
VPS25-201ENST00000253794 RP1P56715 2156 aa13.65□□□□□ -0.22
VPS25-201ENST00000253794 A0A1W2PPV9 198 aa13.65□□□□□ -0.22
VPS25-201ENST00000253794 KRT87PA6NCN2 255 aa13.65□□□□□ -0.22
VPS25-201ENST00000253794 OR6C74A6NCV1 312 aa13.65□□□□□ -0.22
VPS25-201ENST00000253794 PABPN1LA6NDY0 278 aaKnown RBP13.65□□□□□ -0.22
VPS25-201ENST00000253794 GOLGA6L10A6NI86 522 aa13.65□□□□□ -0.22
VPS25-201ENST00000253794 D6RAR5 112 aa13.65□□□□□ -0.22
VPS25-201ENST00000253794 GOLGA8RI6L899 631 aa13.65□□□□□ -0.22
VPS25-201ENST00000253794 COPEO14579 308 aa13.65□□□□□ -0.22
VPS25-201ENST00000253794 TOX3O15405 576 aaPredicted RBP13.65□□□□□ -0.22
VPS25-201ENST00000253794 ATP8B1O43520 1251 aa13.65□□□□□ -0.22
VPS25-201ENST00000253794 TYROBPO43914 113 aa13.65□□□□□ -0.22
VPS25-201ENST00000253794 IPO13O94829 963 aaKnown RBP13.65□□□□□ -0.22
VPS25-201ENST00000253794 ANXA5P08758 320 aa13.65□□□□□ -0.22
VPS25-201ENST00000253794 CHRM5P08912 532 aaPredicted RBP13.65□□□□□ -0.22
VPS25-201ENST00000253794 CCND1P24385 295 aa13.65□□□□□ -0.22
VPS25-201ENST00000253794 PEBP1P30086 187 aaKnown RBP13.65□□□□□ -0.22
VPS25-201ENST00000253794 CSF2RBP32927 897 aa13.65□□□□□ -0.22
VPS25-201ENST00000253794 SLC6A12P48065 614 aa13.65□□□□□ -0.22
VPS25-201ENST00000253794 GLRBP48167 497 aa13.65□□□□□ -0.22
VPS25-201ENST00000253794 SIM1P81133 766 aaPredicted RBP13.65□□□□□ -0.22
VPS25-201ENST00000253794 AGBL2Q5U5Z8 902 aa13.65□□□□□ -0.22
VPS25-201ENST00000253794 SULT1C3Q6IMI6 304 aa13.65□□□□□ -0.22
VPS25-201ENST00000253794 METTL2BQ6P1Q9 378 aaKnown RBP13.65□□□□□ -0.22
VPS25-201ENST00000253794 TMEM71Q6P5X7 295 aa13.65□□□□□ -0.22
VPS25-201ENST00000253794 AGTRAPQ6RW13 159 aa13.65□□□□□ -0.22
VPS25-201ENST00000253794 CDHR3Q6ZTQ4 885 aa13.65□□□□□ -0.22
VPS25-201ENST00000253794 EXOC3L1Q86VI1 746 aa13.65□□□□□ -0.22
VPS25-201ENST00000253794 PLXDC1Q8IUK5 500 aa13.65□□□□□ -0.22
VPS25-201ENST00000253794 C4orf33Q8N1A6 199 aa13.65□□□□□ -0.22
VPS25-201ENST00000253794 Q8N9G6 341 aaPredicted RBP13.65□□□□□ -0.22
VPS25-201ENST00000253794 OR4D9Q8NGE8 314 aa13.65□□□□□ -0.22
VPS25-201ENST00000253794 UBTD2Q8WUN7 234 aa13.65□□□□□ -0.22
VPS25-201ENST00000253794 JPH3Q8WXH2 748 aaPredicted RBP13.65□□□□□ -0.22
VPS25-201ENST00000253794 SMPDL3AQ92484 453 aa13.65□□□□□ -0.22
VPS25-201ENST00000253794 SLC22A18Q96BI1 424 aa13.65□□□□□ -0.22
VPS25-201ENST00000253794 RHBDF1Q96CC6 855 aa13.65□□□□□ -0.22
VPS25-201ENST00000253794 IL17FQ96PD4 163 aa13.65□□□□□ -0.22
VPS25-201ENST00000253794 GFM1Q96RP9 751 aaKnown RBP13.65□□□□□ -0.22
VPS25-201ENST00000253794 SMC6Q96SB8 1091 aa13.65□□□□□ -0.22
VPS25-201ENST00000253794 NRTNQ99748 197 aa13.65□□□□□ -0.22
VPS25-201ENST00000253794 SGPP1Q9BX95 441 aa13.65□□□□□ -0.22
VPS25-201ENST00000253794 PITPNM3Q9BZ71 974 aa13.65□□□□□ -0.22
VPS25-201ENST00000253794 XKR8Q9H6D3 395 aa13.65□□□□□ -0.22
VPS25-201ENST00000253794 HRASLS2Q9NWW9 162 aa13.65□□□□□ -0.22
VPS25-201ENST00000253794 TMEM216Q9P0N5 145 aa13.65□□□□□ -0.22
VPS25-201ENST00000253794 XPR1Q9UBH6 696 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms