RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 PSKH2Q96QS6 385 aa16.6■□□□□ 0.25
FOXA1-201ENST00000250448 OSBPL10Q9BXB5 764 aa16.6■□□□□ 0.25
FOXA1-201ENST00000250448 UGT2B28Q9BY64 529 aa16.6■□□□□ 0.25
FOXA1-201ENST00000250448 ACTL8Q9H568 366 aa16.6■□□□□ 0.25
FOXA1-201ENST00000250448 TDP1Q9NUW8 608 aa16.6■□□□□ 0.25
FOXA1-201ENST00000250448 NLE1Q9NVX2 485 aaPredicted RBP16.6■□□□□ 0.25
FOXA1-201ENST00000250448 RABL2AQ9UBK7 228 aaPredicted RBP16.6■□□□□ 0.25
FOXA1-201ENST00000250448 DNAJB9Q9UBS3 223 aa16.6■□□□□ 0.25
FOXA1-201ENST00000250448 NEUROG3Q9Y4Z2 214 aa16.6■□□□□ 0.25
FOXA1-201ENST00000250448 OR51B4Q9Y5P0 310 aa16.6■□□□□ 0.25
FOXA1-201ENST00000250448 CLDN25C9JDP6 229 aa16.6■□□□□ 0.25
FOXA1-201ENST00000250448 SMAD6O43541 496 aaKnown RBP16.6■□□□□ 0.25
FOXA1-201ENST00000250448 HTR1BP28222 390 aa16.6■□□□□ 0.25
FOXA1-201ENST00000250448 PIGAP37287 484 aa16.6■□□□□ 0.25
FOXA1-201ENST00000250448 EPHA5P54756 1037 aa16.6■□□□□ 0.25
FOXA1-201ENST00000250448 PIGFQ07326 219 aa16.6■□□□□ 0.25
FOXA1-201ENST00000250448 LMAN2Q12907 356 aa16.6■□□□□ 0.25
FOXA1-201ENST00000250448 AADATQ8N5Z0 425 aa16.6■□□□□ 0.25
FOXA1-201ENST00000250448 VN1R2Q8NFZ6 395 aa16.6■□□□□ 0.25
FOXA1-201ENST00000250448 FBXO30Q8TB52 745 aa16.6■□□□□ 0.25
FOXA1-201ENST00000250448 FIG4Q92562 907 aa16.6■□□□□ 0.25
FOXA1-201ENST00000250448 ALG14Q96F25 216 aa16.6■□□□□ 0.25
FOXA1-201ENST00000250448 SH3YL1Q96HL8 342 aaPredicted RBP16.6■□□□□ 0.25
FOXA1-201ENST00000250448 CDK15Q96Q40 435 aa16.6■□□□□ 0.25
FOXA1-201ENST00000250448 MGME1Q9BQP7 344 aa16.6■□□□□ 0.25
FOXA1-201ENST00000250448 MAGEE1Q9HCI5 957 aa16.6■□□□□ 0.25
FOXA1-201ENST00000250448 USE1Q9NZ43 259 aa16.6■□□□□ 0.25
FOXA1-201ENST00000250448 CD274Q9NZQ7 290 aa16.6■□□□□ 0.25
FOXA1-201ENST00000250448 DAPK2Q9UIK4 370 aa16.6■□□□□ 0.25
FOXA1-201ENST00000250448 BAG5Q9UL15 447 aa16.6■□□□□ 0.25
FOXA1-201ENST00000250448 SNX5Q9Y5X3 404 aa16.6■□□□□ 0.25
FOXA1-201ENST00000250448 WNT6Q9Y6F9 365 aa16.6■□□□□ 0.25
FOXA1-201ENST00000250448 E2F3O00716 465 aa16.6■□□□□ 0.25
FOXA1-201ENST00000250448 XYLBO75191 536 aa16.6■□□□□ 0.25
FOXA1-201ENST00000250448 NDST3O95803 873 aa16.6■□□□□ 0.25
FOXA1-201ENST00000250448 LATS1O95835 1130 aa16.6■□□□□ 0.25
FOXA1-201ENST00000250448 G6PDP11413 515 aa16.6■□□□□ 0.25
FOXA1-201ENST00000250448 NR4A1P22736 598 aa16.6■□□□□ 0.25
FOXA1-201ENST00000250448 HALP42357 657 aa16.6■□□□□ 0.25
FOXA1-201ENST00000250448 RXRGP48443 463 aa16.6■□□□□ 0.25
FOXA1-201ENST00000250448 HTR6P50406 440 aa16.6■□□□□ 0.25
FOXA1-201ENST00000250448 DGKQP52824 942 aa16.6■□□□□ 0.25
FOXA1-201ENST00000250448 ERVPABLB-1P60509 514 aa16.6■□□□□ 0.25
FOXA1-201ENST00000250448 OCA2Q04671 838 aa16.6■□□□□ 0.25
FOXA1-201ENST00000250448 CD47Q08722 323 aa16.6■□□□□ 0.25
FOXA1-201ENST00000250448 PTPRNQ16849 979 aa16.6■□□□□ 0.25
FOXA1-201ENST00000250448 PPP2R2DQ66LE6 453 aa16.6■□□□□ 0.25
FOXA1-201ENST00000250448 CYP20A1Q6UW02 462 aa16.6■□□□□ 0.25
FOXA1-201ENST00000250448 ENPP6Q6UWR7 440 aa16.6■□□□□ 0.25
FOXA1-201ENST00000250448 FAM217AQ8IXS0 508 aa16.6■□□□□ 0.25
FOXA1-201ENST00000250448 TTC30BQ8N4P2 665 aa16.6■□□□□ 0.25
FOXA1-201ENST00000250448 OR52B6Q8NGF0 335 aa16.6■□□□□ 0.25
FOXA1-201ENST00000250448 OR8J3Q8NGG0 315 aa16.6■□□□□ 0.25
FOXA1-201ENST00000250448 SMG7Q92540 1137 aaKnown RBP16.6■□□□□ 0.25
FOXA1-201ENST00000250448 TAMM41Q96BW9 452 aa16.6■□□□□ 0.25
FOXA1-201ENST00000250448 MRPS23Q9Y3D9 190 aaKnown RBP16.6■□□□□ 0.25
FOXA1-201ENST00000250448 SPO11Q9Y5K1 396 aa16.6■□□□□ 0.25
FOXA1-201ENST00000250448 NEDD8-MDP1E9PL57 170 aa16.59■□□□□ 0.25
FOXA1-201ENST00000250448 NOBOXO60393 691 aa16.59■□□□□ 0.25
FOXA1-201ENST00000250448 TSPAN12O95859 305 aa16.59■□□□□ 0.25
FOXA1-201ENST00000250448 SERPINF2P08697 491 aa16.59■□□□□ 0.25
FOXA1-201ENST00000250448 GKP32189 559 aa16.59■□□□□ 0.25
FOXA1-201ENST00000250448 CTSOP43234 321 aaPredicted RBP16.59■□□□□ 0.25
FOXA1-201ENST00000250448 PPP2R2BQ00005 443 aa16.59■□□□□ 0.25
FOXA1-201ENST00000250448 KCNAB2Q13303 367 aa16.59■□□□□ 0.25
FOXA1-201ENST00000250448 TOP3AQ13472 1001 aaPredicted RBP16.59■□□□□ 0.25
FOXA1-201ENST00000250448 NKG7Q16617 165 aa16.59■□□□□ 0.25
FOXA1-201ENST00000250448 DPY19L1Q2PZI1 675 aa16.59■□□□□ 0.25
FOXA1-201ENST00000250448 ARHGAP15Q53QZ3 475 aa16.59■□□□□ 0.25
FOXA1-201ENST00000250448 PRSS36Q5K4E3 855 aa16.59■□□□□ 0.25
FOXA1-201ENST00000250448 GPSM1Q86YR5 675 aa16.59■□□□□ 0.25
FOXA1-201ENST00000250448 ZNF583Q96ND8 569 aa16.59■□□□□ 0.25
FOXA1-201ENST00000250448 ALPK1Q96QP1 1244 aa16.59■□□□□ 0.25
FOXA1-201ENST00000250448 SCUBE2Q9NQ36 999 aa16.59■□□□□ 0.25
FOXA1-201ENST00000250448 INTS6Q9UL03 887 aaKnown RBP16.59■□□□□ 0.25
FOXA1-201ENST00000250448 POLR3HQ9Y535 204 aaPredicted RBP16.59■□□□□ 0.25
FOXA1-201ENST00000250448 ATG2AQ2TAZ0 1938 aa16.59■□□□□ 0.25
FOXA1-201ENST00000250448 GSTA4O15217 222 aa16.59■□□□□ 0.25
FOXA1-201ENST00000250448 INSIG1O15503 277 aa16.59■□□□□ 0.25
FOXA1-201ENST00000250448 VPS26AO75436 327 aa16.59■□□□□ 0.25
FOXA1-201ENST00000250448 CST1P01037 141 aa16.59■□□□□ 0.25
FOXA1-201ENST00000250448 ITIH1P19827 911 aa16.59■□□□□ 0.25
FOXA1-201ENST00000250448 RAD23AP54725 363 aa16.59■□□□□ 0.25
FOXA1-201ENST00000250448 RPS3AP61247 264 aaKnown RBP16.59■□□□□ 0.25
FOXA1-201ENST00000250448 PLIN5Q00G26 463 aa16.59■□□□□ 0.25
FOXA1-201ENST00000250448 LETMD1Q6P1Q0 360 aa16.59■□□□□ 0.25
FOXA1-201ENST00000250448 PIWIL3Q7Z3Z3 882 aaKnown RBP16.59■□□□□ 0.25
FOXA1-201ENST00000250448 BTLAQ7Z6A9 289 aa16.59■□□□□ 0.25
FOXA1-201ENST00000250448 HS3ST5Q8IZT8 346 aa16.59■□□□□ 0.25
FOXA1-201ENST00000250448 SVOPLQ8N434 492 aa16.59■□□□□ 0.25
FOXA1-201ENST00000250448 NAT16Q8N8M0 369 aa16.59■□□□□ 0.25
FOXA1-201ENST00000250448 SIDT2Q8NBJ9 832 aaKnown RBP16.59■□□□□ 0.25
FOXA1-201ENST00000250448 OR2T12Q8NG77 320 aa16.59■□□□□ 0.25
FOXA1-201ENST00000250448 OR4K2Q8NGD2 314 aa16.59■□□□□ 0.25
FOXA1-201ENST00000250448 NUDT8Q8WV74 236 aa16.59■□□□□ 0.25
FOXA1-201ENST00000250448 LRRC3BQ96PB8 259 aa16.59■□□□□ 0.25
FOXA1-201ENST00000250448 ABCB8Q9NUT2 735 aa16.59■□□□□ 0.25
FOXA1-201ENST00000250448 EVLQ9UI08 416 aaPredicted RBP16.59■□□□□ 0.25
FOXA1-201ENST00000250448 TRMT6Q9UJA5 497 aaKnown RBP16.59■□□□□ 0.25
FOXA1-201ENST00000250448 IFRD1O00458 451 aaPredicted RBP16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms