RNA–Protein interactions for RNA: ENSMUST00000080860.12

Ccdc28a-202, Transcript of Coiled-coil domain-containing 28A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28a, Length 1,190 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-202ENSMUST00000080860 Tacr2P30549 384 aa11.76□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Tnfsf9P41274 309 aa11.76□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Tbx6P70327 436 aa11.76□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Vps41Q5KU39 853 aa11.76□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Ephx4Q6IE26 359 aa11.76□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Stambpl1Q76N33 436 aa11.76□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Tubb2aQ7TMM9 445 aa11.76□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Amigo1Q80ZD8 492 aa11.76□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Zfp101Q8BP18 612 aa11.76□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Gm9881Q8BR56 211 aa11.76□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Smyd4Q8BTK5 799 aa11.76□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Klhl7Q8BUL5 586 aa11.76□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Tmem154Q8C4Q9 181 aa11.76□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Fcho1Q8K285 873 aa11.76□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Tubg2Q8VCK3 451 aa11.76□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Hdac11Q91WA3 347 aa11.76□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Slc44a3Q921V7 656 aa11.76□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Ceacam2Q925P2 520 aa11.76□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Tnk1Q99ML2 666 aa11.76□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Lrrc40Q9CRC8 602 aa11.76□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Tubb2bQ9CWF2 445 aa11.76□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Ilf2Q9CXY6 390 aaKnown RBP11.76□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 D930007J09RikQ9D2K6 131 aa11.76□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Kcne2Q9D808 123 aa11.76□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Ddx59Q9DBN9 619 aa11.76□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Ccdc97Q9DBT3 340 aa11.76□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Cyp3a44Q9EQW4 504 aa11.76□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 HrgQ9ESB3 525 aa11.76□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Htr3bQ9JHJ5 437 aa11.76□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 CasrQ9QY96 1079 aa11.76□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Ap4b1Q9WV76 738 aa11.76□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Tln1P26039 2541 aaKnown RBP11.76□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 RelnQ60841 3461 aa11.75□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Zfp300A2AE21 645 aa11.75□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Fam71f2B2RXB0 297 aa11.75□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Smpd5D6MZJ6 483 aa11.75□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Vmn2r59E9PUT5 865 aa11.75□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Vmn2r22E9Q7S8 853 aa11.75□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Mkln1O89050 735 aa11.75□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 JunP05627 334 aa11.75□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Cntn1P12960 1020 aa11.75□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Pou5f1P20263 352 aaKnown RBP11.75□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Eno3P21550 434 aa11.75□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 CebpbP28033 296 aa11.75□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Hmx2P43687 273 aa11.75□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Pcbp4P57724 403 aaKnown RBP11.75□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Tubb4bP68372 445 aaKnown RBP11.75□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Slc9a3r1P70441 355 aa11.75□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Teddm2Q208S0 260 aa11.75□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Tfb2mQ3TL26 396 aaKnown RBP11.75□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Nt5dc3Q3UHB1 546 aa11.75□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Tmem102Q3UPR7 509 aa11.75□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 TfrcQ62351 763 aaKnown RBP11.75□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Kif18bQ6PFD6 834 aa11.75□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Ubtd2Q6PGH0 234 aa11.75□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Kcng4Q80XM3 506 aa11.75□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Snx14Q8BHY8 964 aa11.75□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Sdhaf3Q8BQU3 125 aa11.75□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 C1rbQ8CFG9 706 aa11.75□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Trpv3Q8K424 791 aa11.75□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Klrb1fQ8VD98 217 aa11.75□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Ankrd49Q8VE42 238 aa11.75□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Olfr801Q8VEU1 318 aa11.75□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Olfr98Q8VFD9 309 aa11.75□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Olfr811Q8VFI1 319 aa11.75□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Pcdha6Q91Y14 946 aa11.75□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 St13Q99L47 371 aaKnown RBP11.75□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Cep19Q9CQA8 163 aa11.75□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Asf1aQ9CQE6 204 aa11.75□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Arl2bpQ9D385 163 aa11.75□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Erich6bQ9D4S6 220 aa11.75□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Slxl1Q9D515 155 aa11.75□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Iqcf1Q9D9K8 182 aa11.75□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Fam13cQ9DBR2 601 aa11.75□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Krt7Q9DCV7 457 aa11.75□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Taf8Q9EQH4 308 aa11.75□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Cdc20Q9JJ66 499 aa11.75□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Nt5cQ9JM14 200 aa11.75□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Edf1Q9JMG1 148 aaKnown RBP11.75□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Cyhr1Q9QXA1 311 aa11.75□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Ckap5A2AGT5 2032 aaKnown RBP11.75□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 SptbP15508 2128 aa11.74□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Gm6370A0A0G2JGX9 315 aa11.74□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Igkv15-103A0A140T8P3 115 aa11.74□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Tmem74bA2AU34 232 aa11.74□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Trmt1lA2RSY6 728 aaKnown RBP11.74□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 5430403G16RikD3Z5L4 667 aa11.74□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Vmn2r7E9PYL5 915 aa11.74□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Gm6309L7N481 315 aa11.74□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 PdynO35417 248 aa11.74□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Man2b2O54782 1018 aa11.74□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Tcn2O88968 430 aa11.74□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Mmp12P34960 473 aa11.74□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Pdha2P35487 391 aa11.74□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Elk3P41971 409 aa11.74□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 AcadlP51174 430 aaKnown RBP11.74□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 StarP51557 284 aa11.74□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 NcstnP57716 708 aa11.74□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Arl4cP61208 192 aa11.74□□□□□ -0.53
Ccdc28a-202ENSMUST00000080860 Rasgrf2P70392 1189 aa11.74□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 27.9 ms