RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Tnpo3Q6P2B1 923 aaKnown RBP8.49□□□□□ -1.05
Trim39-201ENSMUST00000042717 Tas2r38Q7TQA6 331 aa8.49□□□□□ -1.05
Trim39-201ENSMUST00000042717 Clec4b1Q7TS58 209 aa8.49□□□□□ -1.05
Trim39-201ENSMUST00000042717 Znf32Q80V23 272 aa8.49□□□□□ -1.05
Trim39-201ENSMUST00000042717 Lrrtm4Q80XG9 590 aa8.49□□□□□ -1.05
Trim39-201ENSMUST00000042717 Chst8Q8BQ86 417 aa8.49□□□□□ -1.05
Trim39-201ENSMUST00000042717 Uts2rQ8VIH9 385 aa8.49□□□□□ -1.05
Trim39-201ENSMUST00000042717 Rbm47Q91WT8 590 aaKnown RBP8.49□□□□□ -1.05
Trim39-201ENSMUST00000042717 Pcdhgb5Q91XX5 926 aa8.49□□□□□ -1.05
Trim39-201ENSMUST00000042717 NlnQ91YP2 704 aa8.49□□□□□ -1.05
Trim39-201ENSMUST00000042717 Ptbp2Q91Z31 531 aaKnown RBP8.49□□□□□ -1.05
Trim39-201ENSMUST00000042717 Pacsin3Q99JB8 424 aa8.49□□□□□ -1.05
Trim39-201ENSMUST00000042717 Subh2bvQ9D9Z7 123 aa8.49□□□□□ -1.05
Trim39-201ENSMUST00000042717 HemgnQ9ERZ0 503 aa8.49□□□□□ -1.05
Trim39-201ENSMUST00000042717 Cul3Q9JLV5 768 aa8.49□□□□□ -1.05
Trim39-201ENSMUST00000042717 Apobec2Q9WV35 224 aa8.49□□□□□ -1.05
Trim39-201ENSMUST00000042717 Tgm7A2ART8 616 aa8.49□□□□□ -1.05
Trim39-201ENSMUST00000042717 Ptar1E9QAB6 424 aa8.49□□□□□ -1.05
Trim39-201ENSMUST00000042717 Vmn2r4K7N784 913 aa8.49□□□□□ -1.05
Trim39-201ENSMUST00000042717 Cyp21P03940 487 aa8.49□□□□□ -1.05
Trim39-201ENSMUST00000042717 H2-Q8P14430 326 aa8.49□□□□□ -1.05
Trim39-201ENSMUST00000042717 Svs4P18419 113 aa8.49□□□□□ -1.05
Trim39-201ENSMUST00000042717 Chrm4P32211 479 aa8.49□□□□□ -1.05
Trim39-201ENSMUST00000042717 CratP47934 626 aa8.49□□□□□ -1.05
Trim39-201ENSMUST00000042717 Ebf1Q07802 591 aa8.49□□□□□ -1.05
Trim39-201ENSMUST00000042717 Togaram2Q3TYG6 1002 aa8.49□□□□□ -1.05
Trim39-201ENSMUST00000042717 Taar7fQ5QD08 358 aa8.49□□□□□ -1.05
Trim39-201ENSMUST00000042717 Gstt2Q61133 244 aa8.49□□□□□ -1.05
Trim39-201ENSMUST00000042717 Ddx42Q810A7 929 aaKnown RBP8.49□□□□□ -1.05
Trim39-201ENSMUST00000042717 ChfrQ810L3 664 aa8.49□□□□□ -1.05
Trim39-201ENSMUST00000042717 Coq4Q8BGB8 266 aa8.49□□□□□ -1.05
Trim39-201ENSMUST00000042717 Ap5m1Q8BJ63 490 aa8.49□□□□□ -1.05
Trim39-201ENSMUST00000042717 Zbtb49Q8BXX2 756 aa8.49□□□□□ -1.05
Trim39-201ENSMUST00000042717 Casp9Q8C3Q9 454 aa8.49□□□□□ -1.05
Trim39-201ENSMUST00000042717 Rnf222Q8CEF8 211 aa8.49□□□□□ -1.05
Trim39-201ENSMUST00000042717 Q8CIL4 281 aa8.49□□□□□ -1.05
Trim39-201ENSMUST00000042717 Vmn1r33Q8R2E0 305 aa8.49□□□□□ -1.05
Trim39-201ENSMUST00000042717 Depdc7Q91WS7 511 aa8.49□□□□□ -1.05
Trim39-201ENSMUST00000042717 SncbQ91ZZ3 133 aa8.49□□□□□ -1.05
Trim39-201ENSMUST00000042717 Chchd3Q9CRB9 227 aaKnown RBP8.49□□□□□ -1.05
Trim39-201ENSMUST00000042717 Cyp2u1Q9CX98 530 aa8.49□□□□□ -1.05
Trim39-201ENSMUST00000042717 Dmap1Q9JI44 468 aa8.49□□□□□ -1.05
Trim39-201ENSMUST00000042717 Sppl2aQ9JJF9 523 aa8.49□□□□□ -1.05
Trim39-201ENSMUST00000042717 UxtQ9WTZ0 157 aa8.49□□□□□ -1.05
Trim39-201ENSMUST00000042717 ProdhQ9WU79 599 aa8.49□□□□□ -1.05
Trim39-201ENSMUST00000042717 H2-BlV9GXR0 257 aa8.49□□□□□ -1.05
Trim39-201ENSMUST00000042717 Vmn2r7E9PYL5 915 aa8.48□□□□□ -1.05
Trim39-201ENSMUST00000042717 Vmn2r3H3BJ88 915 aa8.48□□□□□ -1.05
Trim39-201ENSMUST00000042717 Vmn2r6H3BK29 913 aa8.48□□□□□ -1.05
Trim39-201ENSMUST00000042717 Vmn2r44L7N2E1 861 aa8.48□□□□□ -1.05
Trim39-201ENSMUST00000042717 Ackr2O08707 378 aa8.48□□□□□ -1.05
Trim39-201ENSMUST00000042717 Fv4P11370 679 aa8.48□□□□□ -1.05
Trim39-201ENSMUST00000042717 Esr1P19785 599 aa8.48□□□□□ -1.05
Trim39-201ENSMUST00000042717 Ap1g1P22892 822 aa8.48□□□□□ -1.05
Trim39-201ENSMUST00000042717 Tcea3P23881 347 aaKnown RBP8.48□□□□□ -1.05
Trim39-201ENSMUST00000042717 D17Wsu92eQ3TT38 291 aa8.48□□□□□ -1.05
Trim39-201ENSMUST00000042717 Zfp868Q3UTQ6 422 aa8.48□□□□□ -1.05
Trim39-201ENSMUST00000042717 KdsrQ6GV12 332 aa8.48□□□□□ -1.05
Trim39-201ENSMUST00000042717 Zfp324Q78F42 583 aa8.48□□□□□ -1.05
Trim39-201ENSMUST00000042717 Olfr320Q7TRZ4 306 aa8.48□□□□□ -1.05
Trim39-201ENSMUST00000042717 Rcn2Q8BP92 320 aa8.48□□□□□ -1.05
Trim39-201ENSMUST00000042717 Fjx1Q8BQB4 450 aa8.48□□□□□ -1.05
Trim39-201ENSMUST00000042717 Rdh1Q8CGV4 317 aa8.48□□□□□ -1.05
Trim39-201ENSMUST00000042717 Gas2l1Q8JZP9 678 aa8.48□□□□□ -1.05
Trim39-201ENSMUST00000042717 Serpinb10Q8K1K6 397 aa8.48□□□□□ -1.05
Trim39-201ENSMUST00000042717 Slc29a4Q8R139 528 aa8.48□□□□□ -1.05
Trim39-201ENSMUST00000042717 Mptx1Q8R1M8 219 aa8.48□□□□□ -1.05
Trim39-201ENSMUST00000042717 PpidQ9CR16 370 aaKnown RBP8.48□□□□□ -1.05
Trim39-201ENSMUST00000042717 Tbc1d21Q9D9D3 336 aa8.48□□□□□ -1.05
Trim39-201ENSMUST00000042717 Ropn1Q9ESG2 212 aa8.48□□□□□ -1.05
Trim39-201ENSMUST00000042717 Nectin1Q9JKF6 515 aa8.48□□□□□ -1.05
Trim39-201ENSMUST00000042717 VapbQ9QY76 243 aaKnown RBP8.48□□□□□ -1.05
Trim39-201ENSMUST00000042717 Copg1Q9QZE5 874 aa8.48□□□□□ -1.05
Trim39-201ENSMUST00000042717 Gm9573F7C950 1606 aa8.48□□□□□ -1.05
Trim39-201ENSMUST00000042717 Plxna2P70207 1894 aa8.48□□□□□ -1.05
Trim39-201ENSMUST00000042717 Saxo1B1AXP3 476 aa8.48□□□□□ -1.05
Trim39-201ENSMUST00000042717 Ccdc175E9PVB3 822 aa8.48□□□□□ -1.05
Trim39-201ENSMUST00000042717 Cdr1E9Q0B4 517 aa8.48□□□□□ -1.05
Trim39-201ENSMUST00000042717 Vmn1r169L7N275 304 aa8.48□□□□□ -1.05
Trim39-201ENSMUST00000042717 Capn5O08688 640 aaKnown RBP8.48□□□□□ -1.05
Trim39-201ENSMUST00000042717 Etv2P41163 335 aa8.48□□□□□ -1.05
Trim39-201ENSMUST00000042717 Ccr3P51678 359 aa8.48□□□□□ -1.05
Trim39-201ENSMUST00000042717 Tbc1d10aP58802 500 aa8.48□□□□□ -1.05
Trim39-201ENSMUST00000042717 Foxk2Q3UCQ1 651 aa8.48□□□□□ -1.05
Trim39-201ENSMUST00000042717 Nt5c3bQ3UFY7 300 aa8.48□□□□□ -1.05
Trim39-201ENSMUST00000042717 Rbl1Q64701 1063 aa8.48□□□□□ -1.05
Trim39-201ENSMUST00000042717 Znf513Q6PD29 541 aa8.48□□□□□ -1.05
Trim39-201ENSMUST00000042717 Ptx4Q6RUU0 478 aa8.48□□□□□ -1.05
Trim39-201ENSMUST00000042717 Olfr1051Q7TR76 308 aa8.48□□□□□ -1.05
Trim39-201ENSMUST00000042717 Olfr594Q7TRR4 311 aa8.48□□□□□ -1.05
Trim39-201ENSMUST00000042717 PdprQ7TSQ8 878 aa8.48□□□□□ -1.05
Trim39-201ENSMUST00000042717 Tubgcp5Q8BKN5 1024 aa8.48□□□□□ -1.05
Trim39-201ENSMUST00000042717 Cep68Q8C0D9 733 aa8.48□□□□□ -1.05
Trim39-201ENSMUST00000042717 Olfr1310Q8VF85 312 aa8.48□□□□□ -1.05
Trim39-201ENSMUST00000042717 Olfr1Q8VGI1 314 aa8.48□□□□□ -1.05
Trim39-201ENSMUST00000042717 Gtpbp3Q923K4 492 aa8.48□□□□□ -1.05
Trim39-201ENSMUST00000042717 BniplQ99JU7 328 aa8.48□□□□□ -1.05
Trim39-201ENSMUST00000042717 FopnlQ9CZS3 174 aa8.48□□□□□ -1.05
Trim39-201ENSMUST00000042717 Slco6d1Q9D5W6 683 aa8.48□□□□□ -1.05
Trim39-201ENSMUST00000042717 Mrpl17Q9D8P4 176 aa8.48□□□□□ -1.05
Retrieved 100 of 22,080 RNA–protein pairs in 43 ms