RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Glt28d2Q8BML3 165 aa9.97□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Polr1eQ8K202 482 aaKnown RBP9.97□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Zfp709Q8VC29 727 aa9.97□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Zfand2bQ91X58 257 aa9.97□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Prorsd1Q9D820 169 aa9.97□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Glipr1l1Q9DAG6 236 aa9.97□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Dap3Q9ER88 391 aaKnown RBP9.97□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Serinc3Q9QZI9 472 aa9.97□□□□□ -0.81
Ubr1-201ENSMUST00000028728 PrebQ9WUQ2 417 aa9.97□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Cbx4O55187 551 aa9.97□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Nat3P50296 290 aa9.97□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Kcnab2P62482 367 aa9.97□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Cpa6Q5U901 438 aa9.97□□□□□ -0.81
Ubr1-201ENSMUST00000028728 PtprnQ60673 979 aa9.97□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Ddx51Q6P9R1 639 aaKnown RBP9.97□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Olfr834Q7TRG8 312 aa9.97□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Gpr171Q8BG55 319 aa9.97□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Asb14Q8C6Y6 587 aa9.97□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Pi4k2bQ8CBQ5 469 aa9.97□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Slc14a1Q8VHL0 384 aa9.97□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Pcdhb3Q91XZ7 784 aa9.97□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Ufsp2Q99K23 461 aa9.97□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Nudt7Q99P30 236 aa9.97□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Snap29Q9ERB0 260 aa9.97□□□□□ -0.81
Ubr1-201ENSMUST00000028728 ClpxQ9JHS4 634 aaKnown RBP9.97□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Zc3h13E9Q784 1729 aaKnown RBP9.97□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Dbx2F8VQH7 377 aa9.97□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Zw10O54692 779 aa9.97□□□□□ -0.81
Ubr1-201ENSMUST00000028728 LdhcP00342 332 aa9.97□□□□□ -0.81
Ubr1-201ENSMUST00000028728 EpycP70186 322 aa9.97□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Scgb1c1Q7M742 95 aa9.97□□□□□ -0.81
Ubr1-201ENSMUST00000028728 AasdhQ80WC9 1100 aa9.97□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Trnt1Q8K1J6 434 aa9.97□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Vwa1Q8R2Z5 415 aa9.97□□□□□ -0.81
Ubr1-201ENSMUST00000028728 PyurfQ9D1C3 112 aa9.97□□□□□ -0.81
Ubr1-201ENSMUST00000028728 SncgQ9Z0F7 123 aaKnown RBP9.97□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Armc4B2RY50 1037 aa9.96□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Olfr652B9EHE6 318 aa9.96□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Ptrhd1D3Z4S3 140 aa9.96□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Ddx43D3Z6P9 646 aa9.96□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Gm20441G3UYJ7 252 aa9.96□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Kcnj2P35561 428 aa9.96□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Ctps1P70698 591 aa9.96□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Brf2Q3UAW9 420 aa9.96□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Trcg1Q58Y74 825 aa9.96□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Ggt1Q60928 568 aa9.96□□□□□ -0.81
Ubr1-201ENSMUST00000028728 MaobQ8BW75 520 aa9.96□□□□□ -0.81
Ubr1-201ENSMUST00000028728 RybpQ8CCI5 228 aa9.96□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Batf2Q8R1H8 277 aa9.96□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Olfr1090Q8VGA6 313 aa9.96□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Trappc5Q9CQA1 188 aa9.96□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Smim23Q9DAL0 136 aa9.96□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Zfp600A2A7V0 737 aa9.96□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Olfr1049A2ARZ0 308 aa9.96□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Gm7275E9Q1B3 247 aa9.96□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Smpdl3aP70158 445 aa9.96□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Vipr1P97751 459 aa9.96□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Emx2Q04744 253 aa9.96□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Tas2r106Q7M724 308 aa9.96□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Map4k5Q8BPM2 847 aaKnown RBP9.96□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Arfrp1Q8BXL7 201 aa9.96□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Olfr985Q8VGB4 311 aa9.96□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Olfr606Q8VGZ8 319 aa9.96□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Mrps17Q9CQE3 120 aaKnown RBP9.96□□□□□ -0.81
Ubr1-201ENSMUST00000028728 TesclQ9DAJ7 231 aa9.96□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Gm13088A2AGW6 460 aa9.96□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Fam181aJ3QNB7 292 aa9.96□□□□□ -0.81
Ubr1-201ENSMUST00000028728 LeprP48356 1162 aa9.96□□□□□ -0.81
Ubr1-201ENSMUST00000028728 SPINDOCQ05AH6 381 aa9.96□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Znf800Q0VEE6 662 aa9.96□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Cep76Q0VEJ0 659 aa9.96□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Olfr616Q3KPB0 317 aa9.96□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Zfp180Q6NZI9 655 aa9.96□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Mfsd6Q8CBH5 775 aa9.96□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Rsph1Q8VIG3 301 aa9.96□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Cstf1Q99LC2 431 aaKnown RBP9.96□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Lhfpl3Q9CTN8 222 aa9.96□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Ears2Q9CXJ1 523 aa9.96□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Pus10Q9D3U0 527 aa9.96□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Maged1Q9QYH6 775 aaKnown RBP9.96□□□□□ -0.81
Ubr1-201ENSMUST00000028728 PnckQ9QYK9 343 aa9.96□□□□□ -0.81
Ubr1-201ENSMUST00000028728 Bclaf3A2AG58 752 aaKnown RBP9.96□□□□□ -0.82
Ubr1-201ENSMUST00000028728 MafbP54841 323 aa9.96□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Rps3P62908 243 aaKnown RBP9.96□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Il18r1Q61098 537 aa9.96□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Olfr1355Q7TQU9 310 aa9.96□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Rhbdf2Q80WQ6 827 aa9.96□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Zbtb6Q8K088 423 aa9.96□□□□□ -0.82
Ubr1-201ENSMUST00000028728 PpcsQ8VDG5 311 aa9.96□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Nle1Q8VEJ4 485 aa9.96□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Gstt3Q99L20 241 aa9.96□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Fndc8Q9D2H8 321 aa9.96□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Cntnap5aQ0V8T9 1304 aa9.96□□□□□ -0.82
Ubr1-201ENSMUST00000028728 IsxA1A546 240 aa9.96□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Olfr520E9Q518 316 aa9.96□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Rhox13F6YCR7 232 aa9.96□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Slc6a6O35316 621 aa9.96□□□□□ -0.82
Ubr1-201ENSMUST00000028728 GiprQ0P543 460 aa9.96□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Cyp2c65Q148B1 490 aa9.96□□□□□ -0.82
Ubr1-201ENSMUST00000028728 Zfp957Q3UT76 567 aa9.96□□□□□ -0.82
Retrieved 100 of 22,080 RNA–protein pairs in 34.4 ms