RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 Adck1Q9D0L4 525 aa12.5□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Agpat5Q9D1E8 365 aa12.5□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Oser1Q9D722 291 aa12.5□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Gtf2e2Q9D902 292 aa12.5□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Spock2Q9ER58 423 aa12.5□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Tsga8Q9JJL0 238 aa12.5□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Fads2Q9Z0R9 444 aaKnown RBP12.5□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Slc22a4Q9Z306 553 aa12.5□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Slc27a6E9Q9W4 619 aa12.5□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Fabp3P11404 133 aa12.5□□□□□ -0.41
Clcn3-201ENSMUST00000004430 SqleP52019 572 aa12.5□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Tsc22d1P62500 1077 aa12.5□□□□□ -0.41
Clcn3-201ENSMUST00000004430 PtnP63089 168 aa12.5□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Rgs14P97492 547 aa12.5□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Nr4a2Q06219 598 aa12.5□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Lsmem1Q3UQS2 128 aa12.5□□□□□ -0.41
Clcn3-201ENSMUST00000004430 2900092C05RikQ5I0V9 184 aa12.5□□□□□ -0.41
Clcn3-201ENSMUST00000004430 MafkQ61827 156 aa12.5□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Mon1aQ6PDG8 556 aa12.5□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Tspan8Q8R3G9 235 aa12.5□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Adgrf1Q8VEC3 908 aa12.5□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Q9D4W2 315 aa12.5□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Rnf138rt1Q9D9M9 248 aa12.5□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Plscr1Q9JJ00 328 aa12.5□□□□□ -0.41
Clcn3-201ENSMUST00000004430 D7h11orf16Q9JJR6 402 aa12.5□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Mid2Q9QUS6 705 aa12.5□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Gm21915J3QPM7 133 aa12.5□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Ikzf3O08900 507 aa12.5□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Clk4O35493 481 aa12.5□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Hrh1P70174 488 aa12.5□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Usp39Q3TIX9 564 aa12.5□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Vtcn1Q7TSP5 283 aa12.5□□□□□ -0.41
Clcn3-201ENSMUST00000004430 GnsQ8BFR4 544 aa12.5□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Mterf2Q8BKY8 385 aa12.5□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Cbr4Q91VT4 236 aa12.5□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Tmem9Q9CR23 183 aa12.5□□□□□ -0.41
Clcn3-201ENSMUST00000004430 TesminQ9WTJ6 475 aa12.5□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Cylc1A0A1B0GR13 642 aa12.49□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Ankle1A8VU90 534 aa12.49□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Kbtbd6E9PYD7 486 aa12.49□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Kbtbd7G5E8C2 690 aa12.49□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Gm10324L7N208 604 aa12.49□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Csf2P01587 141 aa12.49□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Lire1P11260 357 aa12.49□□□□□ -0.41
Clcn3-201ENSMUST00000004430 TP20293 436 aa12.49□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Syt4P40749 425 aa12.49□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Rps17P63276 135 aaKnown RBP12.49□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Q3TYS2 187 aa12.49□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Sfmbt2Q5DTW2 938 aa12.49□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Ldoc1Q7TPY9 151 aa12.49□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Arhgap11aQ80Y19 987 aa12.49□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Rap2aQ80ZJ1 183 aa12.49□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Hspbap1Q8BK58 483 aa12.49□□□□□ -0.41
Clcn3-201ENSMUST00000004430 PstkQ8BP74 359 aa12.49□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Atg10Q8R1P4 215 aa12.49□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Vmn1r22Q8R2D1 302 aa12.49□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Oit3Q8R4V5 546 aa12.49□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Olfr985Q8VGB4 311 aa12.49□□□□□ -0.41
Clcn3-201ENSMUST00000004430 TraipQ8VIG6 470 aa12.49□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Dnase1l2Q9D1G0 278 aa12.49□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Rnase10Q9D5A9 208 aa12.49□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Pin1Q9QUR7 165 aa12.49□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Nufip1Q9QXX8 484 aa12.49□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Kctd14A0A0U1RNG7 287 aa12.49□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Gm31371A0A1D5RM70 265 aa12.49□□□□□ -0.41
Clcn3-201ENSMUST00000004430 1810010D01RikA0A1L1SR87 51 aa12.49□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Vmn2r21K7N6Y7 853 aa12.49□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Vmn2r112L7N221 857 aa12.49□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Vmn2r20L7N2B1 853 aa12.49□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Kcnc1P15388 511 aa12.49□□□□□ -0.41
Clcn3-201ENSMUST00000004430 SgcdP82347 289 aa12.49□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Coq8aQ60936 645 aa12.49□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Map4k2Q61161 821 aa12.49□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Itga2Q62469 1178 aa12.49□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Zfyve1Q810J8 777 aa12.49□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Vps9d1Q8C190 649 aa12.49□□□□□ -0.41
Clcn3-201ENSMUST00000004430 TbccQ8VCN9 341 aa12.49□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Akr1d1Q8VCX1 325 aa12.49□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Tmem150aQ91WN2 271 aa12.49□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Tex13bQ99MW5 186 aa12.49□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Nudt17Q9CWD3 296 aa12.49□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Ssr3Q9DCF9 185 aa12.49□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Il1rl2Q9ERS7 574 aa12.49□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Enpp2Q9R1E6 862 aa12.49□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Rgs7O54829 469 aa12.49□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Sap18O55128 153 aaKnown RBP12.49□□□□□ -0.41
Clcn3-201ENSMUST00000004430 DmpkP54265 631 aa12.49□□□□□ -0.41
Clcn3-201ENSMUST00000004430 PrlrQ08501 608 aa12.49□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Lingo4Q149C3 593 aa12.49□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Tmem181aQ3U3W2 474 aa12.49□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Zscan26Q5RJ54 466 aa12.49□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Thoc7Q7TMY4 204 aaKnown RBP12.49□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Otub1Q7TQI3 271 aa12.49□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Rxfp4Q7TQP4 414 aa12.49□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Insig1Q8BGI3 259 aa12.49□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Rpl17Q9CPR4 184 aaKnown RBP12.49□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Upk3bl1Q9D701 249 aa12.49□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Rad18Q9QXK2 509 aaKnown RBP12.49□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Ubqln2Q9QZM0 638 aa12.49□□□□□ -0.41
Clcn3-201ENSMUST00000004430 Nlrp1bA1Z198 1177 aa12.48□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 20.8 ms