RNA–Protein interactions for RNA: YBR221C

PDB1, Transcript of E1 beta subunit of the pyruvate dehydrogenase (PDH) complex, yeastyeast

Gene PDB1, Length 1,101 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDB1YBR221C PAP2P53632 584 aaKnown RBP6.33□□□□□ -1.4
PDB1YBR221C UME1Q03010 460 aa6.33□□□□□ -1.4
PDB1YBR221C UGO1Q03327 502 aa6.33□□□□□ -1.4
PDB1YBR221C ISA1Q07821 250 aaPredicted RBP6.33□□□□□ -1.4
PDB1YBR221C MDM38Q08179 573 aa6.33□□□□□ -1.4
PDB1YBR221C NEW1Q08972 1196 aaKnown RBP6.33□□□□□ -1.4
PDB1YBR221C FAP7Q12055 197 aaPredicted RBP6.33□□□□□ -1.4
PDB1YBR221C CAN1P04817 590 aa6.32□□□□□ -1.4
PDB1YBR221C RPS24AP0CX31 135 aaKnown RBP6.32□□□□□ -1.4
PDB1YBR221C RPS24BP0CX32 135 aaKnown RBP6.32□□□□□ -1.4
PDB1YBR221C HXT5P38695 592 aa6.32□□□□□ -1.4
PDB1YBR221C YHL008CP38750 627 aa6.32□□□□□ -1.4
PDB1YBR221C SUM1P46676 1062 aa6.32□□□□□ -1.4
PDB1YBR221C BNA1P47096 177 aa6.32□□□□□ -1.4
PDB1YBR221C YNR063WP53749 607 aa6.32□□□□□ -1.4
PDB1YBR221C UFD2P54860 961 aa6.32□□□□□ -1.4
PDB1YBR221C PUS5Q06244 254 aa6.32□□□□□ -1.4
PDB1YBR221C ESC2Q06340 456 aa6.32□□□□□ -1.4
PDB1YBR221C THI73Q07904 523 aa6.32□□□□□ -1.4
PDB1YBR221C CDC45Q08032 650 aa6.32□□□□□ -1.4
PDB1YBR221C TRE2Q08693 809 aa6.32□□□□□ -1.4
PDB1YBR221C YRR1Q12172 810 aa6.32□□□□□ -1.4
PDB1YBR221C CTT1P06115 562 aa6.31□□□□□ -1.4
PDB1YBR221C MCM10P32354 571 aa6.31□□□□□ -1.4
PDB1YBR221C EUG1P32474 517 aa6.31□□□□□ -1.4
PDB1YBR221C TBS1P38114 1094 aa6.31□□□□□ -1.4
PDB1YBR221C CCT3P39077 534 aaKnown RBP6.31□□□□□ -1.4
PDB1YBR221C GEM1P39722 662 aa6.31□□□□□ -1.4
PDB1YBR221C SGM1P47166 707 aa6.31□□□□□ -1.4
PDB1YBR221C ATH1P48016 1211 aa6.31□□□□□ -1.4
PDB1YBR221C YGR053CP53234 283 aa6.31□□□□□ -1.4
PDB1YBR221C ELA1P53861 379 aaPredicted RBP6.31□□□□□ -1.4
PDB1YBR221C MEC3Q02574 474 aa6.31□□□□□ -1.4
PDB1YBR221C YPR109WQ06104 294 aa6.31□□□□□ -1.4
PDB1YBR221C YPR172WQ06608 200 aa6.31□□□□□ -1.4
PDB1YBR221C HSP60P19882 572 aaKnown RBP6.3□□□□□ -1.4
PDB1YBR221C PLC1P32383 869 aa6.3□□□□□ -1.4
PDB1YBR221C YKL069WP36088 180 aa6.3□□□□□ -1.4
PDB1YBR221C TOS1P38288 455 aa6.3□□□□□ -1.4
PDB1YBR221C NPR3P38742 1146 aa6.3□□□□□ -1.4
PDB1YBR221C MAM1P40065 302 aa6.3□□□□□ -1.4
PDB1YBR221C GPG1P53130 126 aa6.3□□□□□ -1.4
PDB1YBR221C UTP22P53254 1237 aaPredicted RBP6.3□□□□□ -1.4
PDB1YBR221C SAS4Q04003 481 aa6.3□□□□□ -1.4
PDB1YBR221C YDR286CQ05530 114 aa6.3□□□□□ -1.4
PDB1YBR221C OPY2Q06810 360 aa6.3□□□□□ -1.4
PDB1YBR221C SSP2Q08646 371 aa6.3□□□□□ -1.4
PDB1YBR221C YDR056CQ12025 205 aa6.3□□□□□ -1.4
PDB1YBR221C BUG1Q12191 341 aa6.3□□□□□ -1.4
PDB1YBR221C TSC13Q99190 310 aa6.3□□□□□ -1.4
PDB1YBR221C CCP1P00431 361 aa6.29□□□□□ -1.4
PDB1YBR221C RGP1P16664 663 aa6.29□□□□□ -1.4
PDB1YBR221C SLY41P22215 453 aa6.29□□□□□ -1.4
PDB1YBR221C GUT1P32190 709 aa6.29□□□□□ -1.4
PDB1YBR221C HSP78P33416 811 aa6.29□□□□□ -1.4
PDB1YBR221C EAP1P36041 632 aaKnown RBP6.29□□□□□ -1.4
PDB1YBR221C POP2P39008 433 aa6.29□□□□□ -1.4
PDB1YBR221C CNN1P43618 361 aa6.29□□□□□ -1.4
PDB1YBR221C MSN5P52918 1224 aa6.29□□□□□ -1.4
PDB1YBR221C SQS1P53866 767 aaKnown RBP6.29□□□□□ -1.4
PDB1YBR221C PGC1Q08959 321 aa6.29□□□□□ -1.4
PDB1YBR221C FAL1Q12099 399 aaKnown RBP6.29□□□□□ -1.4
PDB1YBR221C HXK1P04806 485 aaKnown RBP6.28□□□□□ -1.4
PDB1YBR221C RED1P14291 827 aa6.28□□□□□ -1.4
PDB1YBR221C SPE2P21182 396 aa6.28□□□□□ -1.4
PDB1YBR221C DBF20P32328 564 aa6.28□□□□□ -1.4
PDB1YBR221C YBR184WP38299 523 aa6.28□□□□□ -1.4
PDB1YBR221C YER156CP40093 338 aaKnown RBP6.28□□□□□ -1.4
PDB1YBR221C SEC9P40357 651 aa6.28□□□□□ -1.4
PDB1YBR221C YNL193WP53870 558 aa6.28□□□□□ -1.4
PDB1YBR221C FRK1Q03002 865 aaPredicted RBP6.28□□□□□ -1.4
PDB1YBR221C NSE5Q03718 556 aa6.28□□□□□ -1.4
PDB1YBR221C MLC2Q06580 163 aa6.28□□□□□ -1.4
PDB1YBR221C TY4B-HP0C2J7 1802 aa6.27□□□□□ -1.41
PDB1YBR221C TY4B-JP47024 1803 aa6.27□□□□□ -1.41
PDB1YBR221C RPL8BP29453 256 aaKnown RBP6.27□□□□□ -1.41
PDB1YBR221C IME2P32581 645 aa6.27□□□□□ -1.41
PDB1YBR221C TFC4P33339 1025 aa6.27□□□□□ -1.41
PDB1YBR221C NIC96P34077 839 aa6.27□□□□□ -1.41
PDB1YBR221C RRF1P38771 230 aa6.27□□□□□ -1.41
PDB1YBR221C CIC1P38779 376 aaKnown RBP6.27□□□□□ -1.41
PDB1YBR221C BUB1P41695 1021 aaKnown RBP RIP-Chip data6.27□□□□□ -1.41not detected
PDB1YBR221C GPD2P41911 440 aaKnown RBP6.27□□□□□ -1.41
PDB1YBR221C MRPS18P42847 217 aa6.27□□□□□ -1.41
PDB1YBR221C IML2P47031 731 aa6.27□□□□□ -1.41
PDB1YBR221C KXD1P53158 218 aa6.27□□□□□ -1.41
PDB1YBR221C YRF1-3P0CX14 1859 aa6.26□□□□□ -1.41
PDB1YBR221C YRF1-7P0CX15 1859 aa6.26□□□□□ -1.41
PDB1YBR221C YRF1-6P53819 1859 aa6.26□□□□□ -1.41
PDB1YBR221C MCM1P11746 286 aa6.26□□□□□ -1.41
PDB1YBR221C IDI1P15496 288 aa6.26□□□□□ -1.41
PDB1YBR221C KAR2P16474 682 aaKnown RBP6.26□□□□□ -1.41
PDB1YBR221C APN1P22936 367 aa6.26□□□□□ -1.41
PDB1YBR221C VPS8P39702 1274 aa6.26□□□□□ -1.41
PDB1YBR221C YIL166CP40445 542 aa6.26□□□□□ -1.41
PDB1YBR221C HUL4P40985 892 aa6.26□□□□□ -1.41
PDB1YBR221C CCT8P47079 568 aaKnown RBP6.26□□□□□ -1.41
PDB1YBR221C YJR115WP47152 169 aa6.26□□□□□ -1.41
PDB1YBR221C PBP1P53297 722 aaKnown RBP6.26□□□□□ -1.41
PDB1YBR221C ADE16P54113 591 aaKnown RBP6.26□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 35.8 ms