RNA–Protein interactions for RNA: YBR182C

SMP1, Transcript of MADS-box transcription factor involved in osmotic stress response, yeast

Gene SMP1, Length 1,359 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SMP1	YBR182C	TMA17	Q12513	150 aa		6.13	□□□□□ -1.43
SMP1	YBR182C	COB	P00163	385 aa		6.12	□□□□□ -1.43
SMP1	YBR182C	SEC23	P15303	768 aa	Known RBP	6.12	□□□□□ -1.43
SMP1	YBR182C	VMA4	P22203	233 aa	Known RBP	6.12	□□□□□ -1.43
SMP1	YBR182C	PYC2	P32327	1180 aa	Known RBP	6.12	□□□□□ -1.43
SMP1	YBR182C	RER2	P35196	286 aa		6.12	□□□□□ -1.43
SMP1	YBR182C	SEA4	P38164	1038 aa		6.12	□□□□□ -1.43
SMP1	YBR182C	GIP2	P40036	548 aa		6.12	□□□□□ -1.43
SMP1	YBR182C	DAS1	P47005	663 aa		6.12	□□□□□ -1.43
SMP1	YBR182C	ENT3	P47160	408 aa		6.12	□□□□□ -1.43
SMP1	YBR182C	RTA1	P53047	317 aa		6.12	□□□□□ -1.43
SMP1	YBR182C	SIW14	P53965	281 aa		6.12	□□□□□ -1.43
SMP1	YBR182C	YLR225C	Q05948	407 aa	Known RBP	6.12	□□□□□ -1.43
SMP1	YBR182C	NUP145	P49687	1317 aa		6.11	□□□□□ -1.43
SMP1	YBR182C	MRP10	O75012	95 aa		6.11	□□□□□ -1.43
SMP1	YBR182C	TRX2	P22803	104 aa	Known RBP	6.11	□□□□□ -1.43
SMP1	YBR182C	DUR3	P33413	735 aa		6.11	□□□□□ -1.43
SMP1	YBR182C	FUI1	P38196	639 aa		6.11	□□□□□ -1.43
SMP1	YBR182C	SHU2	P38957	223 aa		6.11	□□□□□ -1.43
SMP1	YBR182C	ALR2	P43553	858 aa		6.11	□□□□□ -1.43
SMP1	YBR182C	SOK2	P53438	785 aa	Predicted RBP	6.11	□□□□□ -1.43
SMP1	YBR182C	DSE4	P53753	1117 aa		6.11	□□□□□ -1.43
SMP1	YBR182C	PEX13	P80667	386 aa		6.11	□□□□□ -1.43
SMP1	YBR182C	HDA2	Q06629	674 aa		6.11	□□□□□ -1.43
SMP1	YBR182C	YOR378W	Q08902	515 aa		6.11	□□□□□ -1.43
SMP1	YBR182C	TY4B-P	A0A0B7P3V8	1104 aa		6.1	□□□□□ -1.43
SMP1	YBR182C	THS1	P04801	734 aa	Known RBP	6.1	□□□□□ -1.43
SMP1	YBR182C	PIN4	P34217	668 aa	Known RBP RIP-Chip data	6.1	□□□□□ -1.43	not detected
SMP1	YBR182C	TED1	P40533	473 aa		6.1	□□□□□ -1.43
SMP1	YBR182C	NOG1	Q02892	647 aa	Known RBP	6.1	□□□□□ -1.43
SMP1	YBR182C	GIC2	Q06648	383 aa		6.1	□□□□□ -1.43
SMP1	YBR182C	NYV1	Q12255	253 aa		6.1	□□□□□ -1.43
SMP1	YBR182C	TY4A-H	Q6Q5P6	413 aa		6.1	□□□□□ -1.43
SMP1	YBR182C	ATP4	P05626	244 aa		6.09	□□□□□ -1.43
SMP1	YBR182C	KAE1	P36132	386 aa		6.09	□□□□□ -1.43
SMP1	YBR182C	GDH3	P39708	457 aa		6.09	□□□□□ -1.43
SMP1	YBR182C	YIL165C	P40446	119 aa		6.09	□□□□□ -1.43
SMP1	YBR182C	NIT1	P40447	199 aa		6.09	□□□□□ -1.43
SMP1	YBR182C	PPT1	P53043	513 aa		6.09	□□□□□ -1.43
SMP1	YBR182C	YNL193W	P53870	558 aa		6.09	□□□□□ -1.43
SMP1	YBR182C	THI73	Q07904	523 aa		6.09	□□□□□ -1.43
SMP1	YBR182C	NKP1	Q12493	238 aa		6.09	□□□□□ -1.43
SMP1	YBR182C	MSH3	P25336	1018 aa		6.08	□□□□□ -1.44
SMP1	YBR182C	BET3	P36149	193 aa		6.08	□□□□□ -1.44
SMP1	YBR182C	ERP2	P39704	215 aa		6.08	□□□□□ -1.44
SMP1	YBR182C	HXT13	P39924	564 aa		6.08	□□□□□ -1.44
SMP1	YBR182C	HXT17	P53631	564 aa		6.08	□□□□□ -1.44
SMP1	YBR182C	HXT15	P54854	567 aa		6.08	□□□□□ -1.44
SMP1	YBR182C	UME1	Q03010	460 aa		6.08	□□□□□ -1.44
SMP1	YBR182C	ATG16	Q03818	150 aa		6.08	□□□□□ -1.44
SMP1	YBR182C	PGM1	P33401	570 aa	Known RBP	6.07	□□□□□ -1.44
SMP1	YBR182C	RIM11	P38615	370 aa		6.07	□□□□□ -1.44
SMP1	YBR182C	MTR4	P47047	1073 aa	Known RBP	6.07	□□□□□ -1.44
SMP1	YBR182C	FAP7	Q12055	197 aa	Predicted RBP	6.07	□□□□□ -1.44
SMP1	YBR182C	REC8	Q12188	680 aa		6.07	□□□□□ -1.44
SMP1	YBR182C	INO1	P11986	533 aa		6.06	□□□□□ -1.44
SMP1	YBR182C	CDC11	P32458	415 aa		6.06	□□□□□ -1.44
SMP1	YBR182C	YJR120W	P47157	116 aa		6.06	□□□□□ -1.44
SMP1	YBR182C	SND1	Q04007	877 aa		6.06	□□□□□ -1.44
SMP1	YBR182C	MED7	Q08278	222 aa		6.06	□□□□□ -1.44
SMP1	YBR182C	RKM4	Q12504	494 aa		6.06	□□□□□ -1.44
SMP1	YBR182C	CHS2	P14180	963 aa		6.06	□□□□□ -1.44
SMP1	YBR182C	NPR1	P22211	790 aa		6.06	□□□□□ -1.44
SMP1	YBR182C	HIR1	P32479	840 aa		6.06	□□□□□ -1.44
SMP1	YBR182C	LEM3	P42838	414 aa		6.06	□□□□□ -1.44
SMP1	YBR182C	YGR021W	P53212	290 aa		6.06	□□□□□ -1.44
SMP1	YBR182C	SDA1	P53313	767 aa	Known RBP	6.06	□□□□□ -1.44
SMP1	YBR182C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	6.06	□□□□□ -1.44	not detected
SMP1	YBR182C	PRP5	P21372	849 aa	Predicted RBP	6.05	□□□□□ -1.44
SMP1	YBR182C	GSY1	P23337	708 aa		6.05	□□□□□ -1.44
SMP1	YBR182C	YKL107W	P34251	309 aa		6.05	□□□□□ -1.44
SMP1	YBR182C	MOT2	P34909	587 aa	Known RBP	6.05	□□□□□ -1.44
SMP1	YBR182C	YKL077W	P36081	392 aa		6.05	□□□□□ -1.44
SMP1	YBR182C	CCC2	P38995	1004 aa		6.05	□□□□□ -1.44
SMP1	YBR182C	DSS1	P39112	969 aa		6.05	□□□□□ -1.44
SMP1	YBR182C	INP52	P50942	1183 aa		6.05	□□□□□ -1.44
SMP1	YBR182C	MAL11	P53048	616 aa		6.05	□□□□□ -1.44
SMP1	YBR182C	ROD1	Q02805	837 aa		6.05	□□□□□ -1.44
SMP1	YBR182C	CMR1	Q12510	522 aa	Known RBP	6.05	□□□□□ -1.44
SMP1	YBR182C	MDM12	Q92328	271 aa		6.05	□□□□□ -1.44
SMP1	YBR182C	TOM70	P07213	617 aa	Known RBP	6.04	□□□□□ -1.44
SMP1	YBR182C	HEM13	P11353	328 aa	Known RBP	6.04	□□□□□ -1.44
SMP1	YBR182C	RPA135	P22138	1203 aa	Known RBP	6.04	□□□□□ -1.44
SMP1	YBR182C	PUF4	P25339	888 aa	Known RBP RIP-Chip data	6.04	□□□□□ -1.44	not detected
SMP1	YBR182C	RDH54	P38086	958 aa		6.04	□□□□□ -1.44
SMP1	YBR182C	INP51	P40559	946 aa	Known RBP	6.04	□□□□□ -1.44
SMP1	YBR182C	TY4A-J	P47023	414 aa		6.04	□□□□□ -1.44
SMP1	YBR182C	GUP1	P53154	560 aa		6.04	□□□□□ -1.44
SMP1	YBR182C	HFD1	Q04458	532 aa		6.04	□□□□□ -1.44
SMP1	YBR182C	HBN1	Q96VH4	193 aa		6.04	□□□□□ -1.44
SMP1	YBR182C	YEF3	P16521	1044 aa	Known RBP	6.03	□□□□□ -1.44
SMP1	YBR182C	SYP1	P25623	870 aa	Known RBP	6.03	□□□□□ -1.44
SMP1	YBR182C	YBR071W	P38243	211 aa		6.03	□□□□□ -1.44
SMP1	YBR182C	MBP1	P39678	833 aa		6.03	□□□□□ -1.44
SMP1	YBR182C	NOC2	P39744	710 aa	Known RBP	6.03	□□□□□ -1.44
SMP1	YBR182C	YGL176C	P46945	554 aa		6.03	□□□□□ -1.44
SMP1	YBR182C	TIF35	Q04067	274 aa	Known RBP	6.03	□□□□□ -1.44
SMP1	YBR182C	BRE1	Q07457	700 aa	Known RBP	6.03	□□□□□ -1.44
SMP1	YBR182C	TY1A-NL1	Q12391	440 aa	Known RBP	6.03	□□□□□ -1.44
SMP1	YBR182C	MKK2	P32491	506 aa		6.02	□□□□□ -1.45

Retrieved 100 of 5,963 RNA–protein pairs in 10.3 ms