RNA–Protein interactions for RNA: ENST00000641496.1

CASC19-235, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 1,154 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-235ENST00000641496 COL23A1Q86Y22 540 aaPredicted RBP13.02□□□□□ -0.33
CASC19-235ENST00000641496 PLEKHG2Q9H7P9 1386 aa13.02□□□□□ -0.33
CASC19-235ENST00000641496 COL24A1Q17RW2 1714 aa13.02□□□□□ -0.33
CASC19-235ENST00000641496 UBR3Q6ZT12 1888 aa13.02□□□□□ -0.33
CASC19-235ENST00000641496 LOC102724428A0A0B4J2F2 783 aa13.01□□□□□ -0.33
CASC19-235ENST00000641496 SIK1P57059 783 aa13.01□□□□□ -0.33
CASC19-235ENST00000641496 LINC00116Q8NCU8 138 aa13.01□□□□□ -0.33
CASC19-235ENST00000641496 DCAF5Q96JK2 942 aa13.01□□□□□ -0.33
CASC19-235ENST00000641496 ERVV-2B6SEH9 535 aa13□□□□□ -0.33
CASC19-235ENST00000641496 C1orf141Q5JVX7 400 aa13□□□□□ -0.33
CASC19-235ENST00000641496 MSL1Q68DK7 614 aa13□□□□□ -0.33
CASC19-235ENST00000641496 SLC4A9Q96Q91 983 aa13□□□□□ -0.33
CASC19-235ENST00000641496 FHDC1Q9C0D6 1143 aaPredicted RBP13□□□□□ -0.33
CASC19-235ENST00000641496 U2SURPO15042 1029 aaKnown RBP12.99□□□□□ -0.33
CASC19-235ENST00000641496 HSP90AB1P08238 724 aaKnown RBP12.99□□□□□ -0.33
CASC19-235ENST00000641496 CABP4P57796 275 aa12.99□□□□□ -0.33
CASC19-235ENST00000641496 LGR6Q9HBX8 967 aa12.99□□□□□ -0.33
CASC19-235ENST00000641496 PHF14O94880 888 aa12.98□□□□□ -0.33
CASC19-235ENST00000641496 PPP2R1AP30153 589 aa12.98□□□□□ -0.33
CASC19-235ENST00000641496 ATP6V1AP38606 617 aa12.98□□□□□ -0.33
CASC19-235ENST00000641496 MTHFSDQ2M296 383 aaKnown RBP12.98□□□□□ -0.33
CASC19-235ENST00000641496 NFATC2IPQ8NCF5 419 aa12.98□□□□□ -0.33
CASC19-235ENST00000641496 SLC16A10Q8TF71 515 aa12.98□□□□□ -0.33
CASC19-235ENST00000641496 ARXQ96QS3 562 aa12.98□□□□□ -0.33
CASC19-235ENST00000641496 RBM42Q9BTD8 480 aaKnown RBP12.98□□□□□ -0.33
CASC19-235ENST00000641496 MYH14Q7Z406 1995 aaKnown RBP12.98□□□□□ -0.33
CASC19-235ENST00000641496 AKAP4Q5JQC9 854 aa12.97□□□□□ -0.33
CASC19-235ENST00000641496 AK7Q96M32 723 aa12.97□□□□□ -0.33
CASC19-235ENST00000641496 SYT17Q9BSW7 474 aa12.97□□□□□ -0.33
CASC19-235ENST00000641496 PTCD1O75127 700 aaKnown RBP12.96□□□□□ -0.33
CASC19-235ENST00000641496 KLHL34Q8N239 644 aa12.96□□□□□ -0.33
CASC19-235ENST00000641496 COL5A3P25940 1745 aaPredicted RBP12.96□□□□□ -0.34
CASC19-235ENST00000641496 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.95□□□□□ -0.34
CASC19-235ENST00000641496 RNMTO43148 476 aaKnown RBP12.95□□□□□ -0.34
CASC19-235ENST00000641496 ADAMTS7Q9UKP4 1686 aa12.95□□□□□ -0.34
CASC19-235ENST00000641496 TJP1Q07157 1748 aa12.94□□□□□ -0.34
CASC19-235ENST00000641496 ZNF831Q5JPB2 1677 aa12.94□□□□□ -0.34
CASC19-235ENST00000641496 GNPATO15228 680 aa12.94□□□□□ -0.34
CASC19-235ENST00000641496 SLC39A6Q13433 755 aa12.94□□□□□ -0.34
CASC19-235ENST00000641496 PHACTR3Q96KR7 559 aa12.94□□□□□ -0.34
CASC19-235ENST00000641496 MRC1P22897 1456 aa12.93□□□□□ -0.34
CASC19-235ENST00000641496 POLD1P28340 1107 aa12.93□□□□□ -0.34
CASC19-235ENST00000641496 PRKAR2BP31323 418 aa12.93□□□□□ -0.34
CASC19-235ENST00000641496 CFAP53Q96M91 514 aa12.93□□□□□ -0.34
CASC19-235ENST00000641496 RSPH6AQ9H0K4 717 aa12.93□□□□□ -0.34
CASC19-235ENST00000641496 SLC52A2Q9HAB3 445 aa12.93□□□□□ -0.34
CASC19-235ENST00000641496 NLGN2Q8NFZ4 835 aa12.92□□□□□ -0.34
CASC19-235ENST00000641496 U2AF1L5P0DN76 240 aaPredicted RBP12.91□□□□□ -0.34
CASC19-235ENST00000641496 SSFA2P28290 1259 aa12.91□□□□□ -0.34
CASC19-235ENST00000641496 U2AF1Q01081 240 aaKnown RBP eCLIP12.91□□□□□ -0.341e-15■■■□□ 14.9
CASC19-235ENST00000641496 DDX10Q13206 875 aaKnown RBP12.91□□□□□ -0.34
CASC19-235ENST00000641496 FLAD1Q8NFF5 587 aa12.91□□□□□ -0.34
CASC19-235ENST00000641496 MAP3K5Q99683 1374 aa12.91□□□□□ -0.34
CASC19-235ENST00000641496 SIPA1L3O60292 1781 aaPredicted RBP12.9□□□□□ -0.34
CASC19-235ENST00000641496 KCPQ6ZWJ8 1503 aa12.9□□□□□ -0.34
CASC19-235ENST00000641496 DNAJC10Q8IXB1 793 aa12.9□□□□□ -0.34
CASC19-235ENST00000641496 IL17REQ8NFR9 667 aa12.9□□□□□ -0.34
CASC19-235ENST00000641496 C4AP0C0L4 1744 aa12.9□□□□□ -0.34
CASC19-235ENST00000641496 CRKLP46109 303 aaKnown RBP12.89□□□□□ -0.35
CASC19-235ENST00000641496 GAS2L2Q8NHY3 880 aa12.89□□□□□ -0.35
CASC19-235ENST00000641496 RNF39Q9H2S5 420 aa12.89□□□□□ -0.35
CASC19-235ENST00000641496 NUDCQ9Y266 331 aa12.89□□□□□ -0.35
CASC19-235ENST00000641496 UBR2Q8IWV8 1755 aa12.89□□□□□ -0.35
CASC19-235ENST00000641496 CNTNAP4Q9C0A0 1308 aa12.88□□□□□ -0.35
CASC19-235ENST00000641496 CICQ96RK0 1608 aaPredicted RBP12.88□□□□□ -0.35
CASC19-235ENST00000641496 GNAT3A8MTJ3 354 aa12.88□□□□□ -0.35
CASC19-235ENST00000641496 RC3H1Q5TC82 1133 aaKnown RBP12.88□□□□□ -0.35
CASC19-235ENST00000641496 ARHGEF1Q92888 912 aaKnown RBP12.88□□□□□ -0.35
CASC19-235ENST00000641496 RTCBQ9Y3I0 505 aaKnown RBP12.88□□□□□ -0.35
CASC19-235ENST00000641496 RPS6KA4O75676 772 aa12.87□□□□□ -0.35
CASC19-235ENST00000641496 HMGB2P26583 209 aaKnown RBP12.87□□□□□ -0.35
CASC19-235ENST00000641496 INTS5Q6P9B9 1019 aaKnown RBP12.87□□□□□ -0.35
CASC19-235ENST00000641496 DLG5Q8TDM6 1919 aa12.87□□□□□ -0.35
CASC19-235ENST00000641496 KCNQ3O43525 872 aa12.86□□□□□ -0.35
CASC19-235ENST00000641496 YY1P25490 414 aa12.86□□□□□ -0.35
CASC19-235ENST00000641496 TRAPPC3LQ5T215 181 aa12.86□□□□□ -0.35
CASC19-235ENST00000641496 PELP1Q8IZL8 1130 aaKnown RBP12.86□□□□□ -0.35
CASC19-235ENST00000641496 SRP68Q9UHB9 627 aaKnown RBP12.86□□□□□ -0.35
CASC19-235ENST00000641496 CHD4Q14839 1912 aa12.86□□□□□ -0.35
CASC19-235ENST00000641496 MMP10P09238 476 aa12.85□□□□□ -0.35
CASC19-235ENST00000641496 TEFQ10587 303 aa12.85□□□□□ -0.35
CASC19-235ENST00000641496 DCTN1Q14203 1278 aa12.85□□□□□ -0.35
CASC19-235ENST00000641496 GPR162Q16538 588 aa12.85□□□□□ -0.35
CASC19-235ENST00000641496 WWC3Q9ULE0 1092 aa12.85□□□□□ -0.35
CASC19-235ENST00000641496 CEMIPQ8WUJ3 1361 aa12.84□□□□□ -0.35
CASC19-235ENST00000641496 FCHSD2O94868 740 aa12.84□□□□□ -0.35
CASC19-235ENST00000641496 CYP19A1P11511 503 aaPredicted RBP12.84□□□□□ -0.35
CASC19-235ENST00000641496 GYS1P13807 737 aa12.84□□□□□ -0.35
CASC19-235ENST00000641496 MCM10Q7L590 875 aa12.84□□□□□ -0.35
CASC19-235ENST00000641496 ZNF496Q96IT1 587 aaPredicted RBP12.84□□□□□ -0.35
CASC19-235ENST00000641496 CCDC87Q9NVE4 849 aa12.84□□□□□ -0.35
CASC19-235ENST00000641496 YBX3P16989 372 aaKnown RBP eCLIP12.83□□□□□ -0.36
CASC19-235ENST00000641496 RFC4P35249 363 aa12.83□□□□□ -0.36
CASC19-235ENST00000641496 CACNB1Q02641 598 aaPredicted RBP12.83□□□□□ -0.36
CASC19-235ENST00000641496 ZBTB1Q9Y2K1 713 aa12.83□□□□□ -0.36
CASC19-235ENST00000641496 SOS1Q07889 1333 aaPredicted RBP12.83□□□□□ -0.36
CASC19-235ENST00000641496 ZNF790Q6PG37 636 aa12.82□□□□□ -0.36
CASC19-235ENST00000641496 CD2APQ9Y5K6 639 aa12.82□□□□□ -0.36
CASC19-235ENST00000641496 N4BP2Q86UW6 1770 aaPredicted RBP12.81□□□□□ -0.36
CASC19-235ENST00000641496 FKBP8Q14318 412 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms