RNA–Protein interactions for RNA: ENST00000641496.1

CASC19-235, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 1,154 nt, Biotype lincRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-235ENST00000641496 COL23A1Q86Y22 540 aaPredicted RBP13.02□□□□□ -0.33
CASC19-235ENST00000641496 PLEKHG2Q9H7P9 1386 aa13.02□□□□□ -0.33
CASC19-235ENST00000641496 COL24A1Q17RW2 1714 aa13.02□□□□□ -0.33
CASC19-235ENST00000641496 UBR3Q6ZT12 1888 aa13.02□□□□□ -0.33
CASC19-235ENST00000641496 LOC102724428A0A0B4J2F2 783 aa13.01□□□□□ -0.33
CASC19-235ENST00000641496 SIK1P57059 783 aa13.01□□□□□ -0.33
CASC19-235ENST00000641496 LINC00116Q8NCU8 138 aa13.01□□□□□ -0.33
CASC19-235ENST00000641496 DCAF5Q96JK2 942 aa13.01□□□□□ -0.33
CASC19-235ENST00000641496 ERVV-2B6SEH9 535 aa13□□□□□ -0.33
CASC19-235ENST00000641496 C1orf141Q5JVX7 400 aa13□□□□□ -0.33
CASC19-235ENST00000641496 MSL1Q68DK7 614 aa13□□□□□ -0.33
CASC19-235ENST00000641496 SLC4A9Q96Q91 983 aa13□□□□□ -0.33
CASC19-235ENST00000641496 FHDC1Q9C0D6 1143 aaPredicted RBP13□□□□□ -0.33
CASC19-235ENST00000641496 U2SURPO15042 1029 aaKnown RBP12.99□□□□□ -0.33
CASC19-235ENST00000641496 HSP90AB1P08238 724 aaKnown RBP12.99□□□□□ -0.33
CASC19-235ENST00000641496 CABP4P57796 275 aa12.99□□□□□ -0.33
CASC19-235ENST00000641496 LGR6Q9HBX8 967 aa12.99□□□□□ -0.33
CASC19-235ENST00000641496 PHF14O94880 888 aa12.98□□□□□ -0.33
CASC19-235ENST00000641496 PPP2R1AP30153 589 aa12.98□□□□□ -0.33
CASC19-235ENST00000641496 ATP6V1AP38606 617 aa12.98□□□□□ -0.33
CASC19-235ENST00000641496 MTHFSDQ2M296 383 aaKnown RBP12.98□□□□□ -0.33
CASC19-235ENST00000641496 NFATC2IPQ8NCF5 419 aa12.98□□□□□ -0.33
CASC19-235ENST00000641496 SLC16A10Q8TF71 515 aa12.98□□□□□ -0.33
CASC19-235ENST00000641496 ARXQ96QS3 562 aa12.98□□□□□ -0.33
CASC19-235ENST00000641496 RBM42Q9BTD8 480 aaKnown RBP12.98□□□□□ -0.33
CASC19-235ENST00000641496 MYH14Q7Z406 1995 aaKnown RBP12.98□□□□□ -0.33
CASC19-235ENST00000641496 AKAP4Q5JQC9 854 aa12.97□□□□□ -0.33
CASC19-235ENST00000641496 AK7Q96M32 723 aa12.97□□□□□ -0.33
CASC19-235ENST00000641496 SYT17Q9BSW7 474 aa12.97□□□□□ -0.33
CASC19-235ENST00000641496 PTCD1O75127 700 aaKnown RBP12.96□□□□□ -0.33
CASC19-235ENST00000641496 KLHL34Q8N239 644 aa12.96□□□□□ -0.33
CASC19-235ENST00000641496 COL5A3P25940 1745 aaPredicted RBP12.96□□□□□ -0.34
CASC19-235ENST00000641496 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.95□□□□□ -0.34
CASC19-235ENST00000641496 RNMTO43148 476 aaKnown RBP12.95□□□□□ -0.34
CASC19-235ENST00000641496 ADAMTS7Q9UKP4 1686 aa12.95□□□□□ -0.34
CASC19-235ENST00000641496 TJP1Q07157 1748 aa12.94□□□□□ -0.34
CASC19-235ENST00000641496 ZNF831Q5JPB2 1677 aa12.94□□□□□ -0.34
CASC19-235ENST00000641496 GNPATO15228 680 aa12.94□□□□□ -0.34
CASC19-235ENST00000641496 SLC39A6Q13433 755 aa12.94□□□□□ -0.34
CASC19-235ENST00000641496 PHACTR3Q96KR7 559 aa12.94□□□□□ -0.34
CASC19-235ENST00000641496 MRC1P22897 1456 aa12.93□□□□□ -0.34
CASC19-235ENST00000641496 POLD1P28340 1107 aa12.93□□□□□ -0.34
CASC19-235ENST00000641496 PRKAR2BP31323 418 aa12.93□□□□□ -0.34
CASC19-235ENST00000641496 CFAP53Q96M91 514 aa12.93□□□□□ -0.34
CASC19-235ENST00000641496 RSPH6AQ9H0K4 717 aa12.93□□□□□ -0.34
CASC19-235ENST00000641496 SLC52A2Q9HAB3 445 aa12.93□□□□□ -0.34
CASC19-235ENST00000641496 NLGN2Q8NFZ4 835 aa12.92□□□□□ -0.34
CASC19-235ENST00000641496 U2AF1L5P0DN76 240 aaPredicted RBP12.91□□□□□ -0.34
CASC19-235ENST00000641496 SSFA2P28290 1259 aa12.91□□□□□ -0.34
CASC19-235ENST00000641496 U2AF1Q01081 240 aaKnown RBP eCLIP12.91□□□□□ -0.341e-15■■■□□ 14.9
CASC19-235ENST00000641496 DDX10Q13206 875 aaKnown RBP12.91□□□□□ -0.34
CASC19-235ENST00000641496 FLAD1Q8NFF5 587 aa12.91□□□□□ -0.34
CASC19-235ENST00000641496 MAP3K5Q99683 1374 aa12.91□□□□□ -0.34
CASC19-235ENST00000641496 SIPA1L3O60292 1781 aaPredicted RBP12.9□□□□□ -0.34
CASC19-235ENST00000641496 KCPQ6ZWJ8 1503 aa12.9□□□□□ -0.34
CASC19-235ENST00000641496 DNAJC10Q8IXB1 793 aa12.9□□□□□ -0.34
CASC19-235ENST00000641496 IL17REQ8NFR9 667 aa12.9□□□□□ -0.34
CASC19-235ENST00000641496 C4AP0C0L4 1744 aa12.9□□□□□ -0.34
CASC19-235ENST00000641496 CRKLP46109 303 aaKnown RBP12.89□□□□□ -0.35
CASC19-235ENST00000641496 GAS2L2Q8NHY3 880 aa12.89□□□□□ -0.35
CASC19-235ENST00000641496 RNF39Q9H2S5 420 aa12.89□□□□□ -0.35
CASC19-235ENST00000641496 NUDCQ9Y266 331 aa12.89□□□□□ -0.35
CASC19-235ENST00000641496 UBR2Q8IWV8 1755 aa12.89□□□□□ -0.35
CASC19-235ENST00000641496 CNTNAP4Q9C0A0 1308 aa12.88□□□□□ -0.35
CASC19-235ENST00000641496 CICQ96RK0 1608 aaPredicted RBP12.88□□□□□ -0.35
CASC19-235ENST00000641496 GNAT3A8MTJ3 354 aa12.88□□□□□ -0.35
CASC19-235ENST00000641496 RC3H1Q5TC82 1133 aaKnown RBP12.88□□□□□ -0.35
CASC19-235ENST00000641496 ARHGEF1Q92888 912 aaKnown RBP12.88□□□□□ -0.35
CASC19-235ENST00000641496 RTCBQ9Y3I0 505 aaKnown RBP12.88□□□□□ -0.35
CASC19-235ENST00000641496 RPS6KA4O75676 772 aa12.87□□□□□ -0.35
CASC19-235ENST00000641496 HMGB2P26583 209 aaKnown RBP12.87□□□□□ -0.35
CASC19-235ENST00000641496 INTS5Q6P9B9 1019 aaKnown RBP12.87□□□□□ -0.35
CASC19-235ENST00000641496 DLG5Q8TDM6 1919 aa12.87□□□□□ -0.35
CASC19-235ENST00000641496 KCNQ3O43525 872 aa12.86□□□□□ -0.35
CASC19-235ENST00000641496 YY1P25490 414 aa12.86□□□□□ -0.35
CASC19-235ENST00000641496 TRAPPC3LQ5T215 181 aa12.86□□□□□ -0.35
CASC19-235ENST00000641496 PELP1Q8IZL8 1130 aaKnown RBP12.86□□□□□ -0.35
CASC19-235ENST00000641496 SRP68Q9UHB9 627 aaKnown RBP12.86□□□□□ -0.35
CASC19-235ENST00000641496 CHD4Q14839 1912 aa12.86□□□□□ -0.35
CASC19-235ENST00000641496 MMP10P09238 476 aa12.85□□□□□ -0.35
CASC19-235ENST00000641496 TEFQ10587 303 aa12.85□□□□□ -0.35
CASC19-235ENST00000641496 DCTN1Q14203 1278 aa12.85□□□□□ -0.35
CASC19-235ENST00000641496 GPR162Q16538 588 aa12.85□□□□□ -0.35
CASC19-235ENST00000641496 WWC3Q9ULE0 1092 aa12.85□□□□□ -0.35
CASC19-235ENST00000641496 CEMIPQ8WUJ3 1361 aa12.84□□□□□ -0.35
CASC19-235ENST00000641496 FCHSD2O94868 740 aa12.84□□□□□ -0.35
CASC19-235ENST00000641496 CYP19A1P11511 503 aaPredicted RBP12.84□□□□□ -0.35
CASC19-235ENST00000641496 GYS1P13807 737 aa12.84□□□□□ -0.35
CASC19-235ENST00000641496 MCM10Q7L590 875 aa12.84□□□□□ -0.35
CASC19-235ENST00000641496 ZNF496Q96IT1 587 aaPredicted RBP12.84□□□□□ -0.35
CASC19-235ENST00000641496 CCDC87Q9NVE4 849 aa12.84□□□□□ -0.35
CASC19-235ENST00000641496 YBX3P16989 372 aaKnown RBP eCLIP12.83□□□□□ -0.36
CASC19-235ENST00000641496 RFC4P35249 363 aa12.83□□□□□ -0.36
CASC19-235ENST00000641496 CACNB1Q02641 598 aaPredicted RBP12.83□□□□□ -0.36
CASC19-235ENST00000641496 ZBTB1Q9Y2K1 713 aa12.83□□□□□ -0.36
CASC19-235ENST00000641496 SOS1Q07889 1333 aaPredicted RBP12.83□□□□□ -0.36
CASC19-235ENST00000641496 ZNF790Q6PG37 636 aa12.82□□□□□ -0.36
CASC19-235ENST00000641496 CD2APQ9Y5K6 639 aa12.82□□□□□ -0.36
CASC19-235ENST00000641496 N4BP2Q86UW6 1770 aaPredicted RBP12.81□□□□□ -0.36
CASC19-235ENST00000641496 FKBP8Q14318 412 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms