RNA–Protein interactions for RNA: ENST00000640909.1

KCNC1-213, Transcript of potassium voltage-gated channel subfamily C member 1, humanhuman

TSL 5

Gene KCNC1, Length 1,270 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC1-213ENST00000640909 NLGN1Q8N2Q7 840 aa20.7■□□□□ 0.9
KCNC1-213ENST00000640909 USHBP1Q8N6Y0 703 aa20.7■□□□□ 0.9
KCNC1-213ENST00000640909 CCDC87Q9NVE4 849 aa20.7■□□□□ 0.9
KCNC1-213ENST00000640909 INSRP06213 1382 aa20.7■□□□□ 0.9
KCNC1-213ENST00000640909 A0A0G2JLW4 131 aa20.69■□□□□ 0.9
KCNC1-213ENST00000640909 NKX1-1Q15270 411 aaPredicted RBP20.69■□□□□ 0.9
KCNC1-213ENST00000640909 SMIM5Q71RC9 77 aa20.69■□□□□ 0.9
KCNC1-213ENST00000640909 PIGBQ92521 554 aa20.69■□□□□ 0.9
KCNC1-213ENST00000640909 ZC3H4Q9UPT8 1303 aaKnown RBP20.68■□□□□ 0.9
KCNC1-213ENST00000640909 SLC34A2O95436 690 aa20.67■□□□□ 0.9
KCNC1-213ENST00000640909 HSPA1AP0DMV8 641 aaKnown RBP20.67■□□□□ 0.9
KCNC1-213ENST00000640909 HSPA1BP0DMV9 641 aaKnown RBP20.67■□□□□ 0.9
KCNC1-213ENST00000640909 DPEP1P16444 411 aa20.67■□□□□ 0.9
KCNC1-213ENST00000640909 NCAPD2Q15021 1401 aa20.67■□□□□ 0.9
KCNC1-213ENST00000640909 ADRA2BP18089 450 aa20.66■□□□□ 0.9
KCNC1-213ENST00000640909 FLT4P35916 1363 aa20.66■□□□□ 0.9
KCNC1-213ENST00000640909 SBF1O95248 1867 aa20.65■□□□□ 0.9
KCNC1-213ENST00000640909 TMF1P82094 1093 aa20.65■□□□□ 0.9
KCNC1-213ENST00000640909 RRS1Q15050 365 aaKnown RBP20.65■□□□□ 0.9
KCNC1-213ENST00000640909 DCAF5Q96JK2 942 aa20.65■□□□□ 0.9
KCNC1-213ENST00000640909 COL5A3P25940 1745 aaPredicted RBP20.64■□□□□ 0.9
KCNC1-213ENST00000640909 FBLN1P23142 703 aa20.64■□□□□ 0.89
KCNC1-213ENST00000640909 ATP6V1AP38606 617 aa20.64■□□□□ 0.89
KCNC1-213ENST00000640909 ITPK1Q13572 414 aa20.64■□□□□ 0.89
KCNC1-213ENST00000640909 RTCBQ9Y3I0 505 aaKnown RBP20.64■□□□□ 0.89
KCNC1-213ENST00000640909 TRAPPC3LQ5T215 181 aa20.63■□□□□ 0.89
KCNC1-213ENST00000640909 CARD11Q9BXL7 1154 aa20.63■□□□□ 0.89
KCNC1-213ENST00000640909 RRAGCQ9HB90 399 aa20.63■□□□□ 0.89
KCNC1-213ENST00000640909 TMOD3Q9NYL9 352 aa20.63■□□□□ 0.89
KCNC1-213ENST00000640909 PIM2Q9P1W9 311 aa20.63■□□□□ 0.89
KCNC1-213ENST00000640909 KDRP35968 1356 aa20.62■□□□□ 0.89
KCNC1-213ENST00000640909 KCNA3P22001 575 aa20.62■□□□□ 0.89
KCNC1-213ENST00000640909 RNF181Q9P0P0 153 aa20.62■□□□□ 0.89
KCNC1-213ENST00000640909 PARP3Q9Y6F1 533 aa20.62■□□□□ 0.89
KCNC1-213ENST00000640909 SPG7Q9UQ90 795 aa20.61■□□□□ 0.89
KCNC1-213ENST00000640909 HSP90AB2PQ58FF8 381 aa20.6■□□□□ 0.89
KCNC1-213ENST00000640909 DALRD3Q5D0E6 543 aaKnown RBP20.6■□□□□ 0.89
KCNC1-213ENST00000640909 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.6■□□□□ 0.89
KCNC1-213ENST00000640909 KIF20BQ96Q89 1820 aa20.6■□□□□ 0.89
KCNC1-213ENST00000640909 SLC24A1O60721 1099 aa20.59■□□□□ 0.89
KCNC1-213ENST00000640909 RC3H1Q5TC82 1133 aaKnown RBP20.59■□□□□ 0.89
KCNC1-213ENST00000640909 ASAP1Q9ULH1 1129 aa20.59■□□□□ 0.89
KCNC1-213ENST00000640909 KDM6AO15550 1401 aaPredicted RBP20.59■□□□□ 0.89
KCNC1-213ENST00000640909 GYS1P13807 737 aa20.58■□□□□ 0.89
KCNC1-213ENST00000640909 ANKRD26Q9UPS8 1709 aa20.58■□□□□ 0.88
KCNC1-213ENST00000640909 CNTNAP4Q9C0A0 1308 aa20.57■□□□□ 0.88
KCNC1-213ENST00000640909 TONSLQ96HA7 1378 aa20.57■□□□□ 0.88
KCNC1-213ENST00000640909 FYB1O15117 783 aa20.56■□□□□ 0.88
KCNC1-213ENST00000640909 RFC4P35249 363 aa20.56■□□□□ 0.88
KCNC1-213ENST00000640909 ARHGEF1Q92888 912 aaKnown RBP20.56■□□□□ 0.88
KCNC1-213ENST00000640909 VEGFAP15692 232 aaPredicted RBP20.55■□□□□ 0.88
KCNC1-213ENST00000640909 ATG3Q9NT62 314 aa20.55■□□□□ 0.88
KCNC1-213ENST00000640909 TIAM2Q8IVF5 1701 aa20.55■□□□□ 0.88
KCNC1-213ENST00000640909 GLTPD2A6NH11 291 aa20.53■□□□□ 0.88
KCNC1-213ENST00000640909 RPS6KA4O75676 772 aa20.53■□□□□ 0.88
KCNC1-213ENST00000640909 IFNL2Q8IZJ0 200 aa20.53■□□□□ 0.88
KCNC1-213ENST00000640909 SIN3AQ96ST3 1273 aa20.53■□□□□ 0.88
KCNC1-213ENST00000640909 GGNBP2Q9H3C7 697 aa20.52■□□□□ 0.88
KCNC1-213ENST00000640909 PHKG2P15735 406 aa20.51■□□□□ 0.87
KCNC1-213ENST00000640909 TESK2Q96S53 571 aa20.51■□□□□ 0.87
KCNC1-213ENST00000640909 DLEC1Q9Y238 1755 aa20.51■□□□□ 0.87
KCNC1-213ENST00000640909 PCDH10Q9P2E7 1040 aa20.5■□□□□ 0.87
KCNC1-213ENST00000640909 MYH14Q7Z406 1995 aaKnown RBP20.49■□□□□ 0.87
KCNC1-213ENST00000640909 LMNB1P20700 586 aa20.49■□□□□ 0.87
KCNC1-213ENST00000640909 PRDM10Q9NQV6 1147 aa20.49■□□□□ 0.87
KCNC1-213ENST00000640909 SLC4A9Q96Q91 983 aa20.48■□□□□ 0.87
KCNC1-213ENST00000640909 ERVV-2B6SEH9 535 aa20.47■□□□□ 0.87
KCNC1-213ENST00000640909 NEUROD1Q13562 356 aa20.47■□□□□ 0.87
KCNC1-213ENST00000640909 CREBZFQ9NS37 354 aa20.47■□□□□ 0.87
KCNC1-213ENST00000640909 USP42Q9H9J4 1324 aaKnown RBP20.47■□□□□ 0.87
KCNC1-213ENST00000640909 DDR1Q08345 913 aa20.45■□□□□ 0.86
KCNC1-213ENST00000640909 CHRNA5P30532 468 aa20.44■□□□□ 0.86
KCNC1-213ENST00000640909 RBM42Q9BTD8 480 aaKnown RBP20.44■□□□□ 0.86
KCNC1-213ENST00000640909 ADAMTS7Q9UKP4 1686 aa20.44■□□□□ 0.86
KCNC1-213ENST00000640909 NRXN2Q9P2S2 1712 aa20.44■□□□□ 0.86
KCNC1-213ENST00000640909 HSP90AB1P08238 724 aaKnown RBP20.43■□□□□ 0.86
KCNC1-213ENST00000640909 RASSF7Q02833 373 aa20.43■□□□□ 0.86
KCNC1-213ENST00000640909 EMILIN1Q9Y6C2 1016 aa20.43■□□□□ 0.86
KCNC1-213ENST00000640909 WASHC2AQ641Q2 1341 aa20.43■□□□□ 0.86
KCNC1-213ENST00000640909 CCDC88AQ3V6T2 1871 aa20.43■□□□□ 0.86
KCNC1-213ENST00000640909 FKBP8Q14318 412 aa20.42■□□□□ 0.86
KCNC1-213ENST00000640909 EYA1Q99502 592 aa20.42■□□□□ 0.86
KCNC1-213ENST00000640909 TJP1Q07157 1748 aa20.41■□□□□ 0.86
KCNC1-213ENST00000640909 ST20-MTHFSA0A0A6YYL1 179 aa20.41■□□□□ 0.86
KCNC1-213ENST00000640909 POLRMTO00411 1230 aaKnown RBP20.41■□□□□ 0.86
KCNC1-213ENST00000640909 DICER1Q9UPY3 1922 aaKnown RBP20.41■□□□□ 0.86
KCNC1-213ENST00000640909 FOXN1O15353 648 aa20.4■□□□□ 0.86
KCNC1-213ENST00000640909 CNTNAP1P78357 1384 aa20.4■□□□□ 0.86
KCNC1-213ENST00000640909 DPY19L2Q6NUT2 758 aa20.4■□□□□ 0.86
KCNC1-213ENST00000640909 AFDNP55196 1824 aaKnown RBP20.39■□□□□ 0.86
KCNC1-213ENST00000640909 TM4SF1P30408 202 aa20.39■□□□□ 0.85
KCNC1-213ENST00000640909 CTCFP49711 727 aaPredicted RBP20.39■□□□□ 0.85
KCNC1-213ENST00000640909 POTECB2RU33 542 aa20.38■□□□□ 0.85
KCNC1-213ENST00000640909 CRKLP46109 303 aaKnown RBP20.38■□□□□ 0.85
KCNC1-213ENST00000640909 SRP68Q9UHB9 627 aaKnown RBP20.38■□□□□ 0.85
KCNC1-213ENST00000640909 AIDAQ96BJ3 306 aa20.37■□□□□ 0.85
KCNC1-213ENST00000640909 MKRN1Q9UHC7 482 aaKnown RBP20.37■□□□□ 0.85
KCNC1-213ENST00000640909 CHADLQ6NUI6 762 aa20.36■□□□□ 0.85
KCNC1-213ENST00000640909 TTLL6Q8N841 843 aa20.36■□□□□ 0.85
KCNC1-213ENST00000640909 VIRMAQ69YN4 1812 aaKnown RBP20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 120.5 ms