RNA–Protein interactions for RNA: ENST00000640525.1

RTTN-219, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 2,136 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-219ENST00000640525 U2AF1L5P0DN76 240 aaPredicted RBP6.91□□□□□ -1.3
RTTN-219ENST00000640525 U2AF1Q01081 240 aaKnown RBP eCLIP6.91□□□□□ -1.3
RTTN-219ENST00000640525 EIF4A2Q14240 407 aaKnown RBP6.91□□□□□ -1.3
RTTN-219ENST00000640525 ARSIQ5FYB1 569 aa6.91□□□□□ -1.3
RTTN-219ENST00000640525 PTCD2Q8WV60 388 aaKnown RBP6.91□□□□□ -1.3
RTTN-219ENST00000640525 AXIN2Q9Y2T1 843 aa6.91□□□□□ -1.3
RTTN-219ENST00000640525 SALL2Q9Y467 1007 aaPredicted RBP6.91□□□□□ -1.3
RTTN-219ENST00000640525 ARIH1Q9Y4X5 557 aaPredicted RBP6.91□□□□□ -1.3
RTTN-219ENST00000640525 LTN1O94822 1766 aa6.9□□□□□ -1.3
RTTN-219ENST00000640525 SMG6Q86US8 1419 aaKnown RBP6.9□□□□□ -1.3
RTTN-219ENST00000640525 SHPRHQ149N8 1683 aa6.9□□□□□ -1.3
RTTN-219ENST00000640525 CRYBG1Q9Y4K1 1723 aa6.9□□□□□ -1.3
RTTN-219ENST00000640525 IL13P35225 146 aa6.9□□□□□ -1.3
RTTN-219ENST00000640525 PRIM1P49642 420 aaKnown RBP6.9□□□□□ -1.3
RTTN-219ENST00000640525 DDX12PQ92771 950 aa6.9□□□□□ -1.3
RTTN-219ENST00000640525 FLT4P35916 1363 aa6.9□□□□□ -1.31
RTTN-219ENST00000640525 CDK12Q9NYV4 1490 aaPredicted RBP6.9□□□□□ -1.31
RTTN-219ENST00000640525 TESPA1A2RU30 521 aaPredicted RBP6.89□□□□□ -1.31
RTTN-219ENST00000640525 USHBP1Q8N6Y0 703 aa6.89□□□□□ -1.31
RTTN-219ENST00000640525 IP6K1Q92551 441 aa6.89□□□□□ -1.31
RTTN-219ENST00000640525 PRDM11Q9NQV5 511 aa6.89□□□□□ -1.31
RTTN-219ENST00000640525 FAM83GA6ND36 823 aa6.89□□□□□ -1.31
RTTN-219ENST00000640525 HNRNPUQ00839 825 aaKnown RBP eCLIP6.89□□□□□ -1.31
RTTN-219ENST00000640525 PDIA6Q15084 440 aa6.89□□□□□ -1.31
RTTN-219ENST00000640525 RBM26Q5T8P6 1007 aaKnown RBP6.89□□□□□ -1.31
RTTN-219ENST00000640525 GPR153Q6NV75 609 aa6.89□□□□□ -1.31
RTTN-219ENST00000640525 AEBP1Q8IUX7 1158 aa6.89□□□□□ -1.31
RTTN-219ENST00000640525 NUDCQ9Y266 331 aa6.89□□□□□ -1.31
RTTN-219ENST00000640525 PCDHGA4Q9Y5G9 962 aa6.89□□□□□ -1.31
RTTN-219ENST00000640525 ABCA3Q99758 1704 aa6.89□□□□□ -1.31
RTTN-219ENST00000640525 EVI5O60447 810 aa6.88□□□□□ -1.31
RTTN-219ENST00000640525 NUDT7P0C024 238 aa6.88□□□□□ -1.31
RTTN-219ENST00000640525 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.88□□□□□ -1.31
RTTN-219ENST00000640525 ANKRD24Q8TF21 1146 aa6.88□□□□□ -1.31
RTTN-219ENST00000640525 RGPD5Q99666 1765 aa6.88□□□□□ -1.31
RTTN-219ENST00000640525 INSRP06213 1382 aa6.88□□□□□ -1.31
RTTN-219ENST00000640525 GRXCR2A6NFK2 248 aa6.88□□□□□ -1.31
RTTN-219ENST00000640525 SLC34A2O95436 690 aa6.88□□□□□ -1.31
RTTN-219ENST00000640525 SULT6B1Q6IMI4 303 aa6.88□□□□□ -1.31
RTTN-219ENST00000640525 EYA1Q99502 592 aa6.88□□□□□ -1.31
RTTN-219ENST00000640525 STRN4Q9NRL3 753 aa6.88□□□□□ -1.31
RTTN-219ENST00000640525 RTL1A6NKG5 1358 aa6.87□□□□□ -1.31
RTTN-219ENST00000640525 JCADQ9P266 1359 aa6.87□□□□□ -1.31
RTTN-219ENST00000640525 CSB-PGBD3P0DP91 1061 aa6.87□□□□□ -1.31
RTTN-219ENST00000640525 TPRNQ4KMQ1 711 aa6.87□□□□□ -1.31
RTTN-219ENST00000640525 NBPF6Q5VWK0 638 aa6.87□□□□□ -1.31
RTTN-219ENST00000640525 NBPF4Q96M43 638 aa6.87□□□□□ -1.31
RTTN-219ENST00000640525 RRP7AQ9Y3A4 280 aaKnown RBP6.87□□□□□ -1.31
RTTN-219ENST00000640525 CPDO75976 1380 aa6.87□□□□□ -1.31
RTTN-219ENST00000640525 PRKAR2BP31323 418 aa6.86□□□□□ -1.31
RTTN-219ENST00000640525 NEUROD2Q15784 382 aa6.86□□□□□ -1.31
RTTN-219ENST00000640525 NLRP2Q9NX02 1062 aa6.86□□□□□ -1.31
RTTN-219ENST00000640525 BTG4Q9NY30 223 aa6.86□□□□□ -1.31
RTTN-219ENST00000640525 COL22A1Q8NFW1 1626 aaPredicted RBP6.86□□□□□ -1.31
RTTN-219ENST00000640525 COL18A1P39060 1754 aa6.86□□□□□ -1.31
RTTN-219ENST00000640525 CAMTA1Q9Y6Y1 1673 aa6.86□□□□□ -1.31
RTTN-219ENST00000640525 APAF1O14727 1248 aa6.86□□□□□ -1.31
RTTN-219ENST00000640525 ST18O60284 1047 aa6.86□□□□□ -1.31
RTTN-219ENST00000640525 EVA1CP58658 441 aa6.86□□□□□ -1.31
RTTN-219ENST00000640525 PHACTR3Q96KR7 559 aa6.86□□□□□ -1.31
RTTN-219ENST00000640525 RSPH6AQ9H0K4 717 aa6.86□□□□□ -1.31
RTTN-219ENST00000640525 RGPD2P0DJD1 1756 aa6.86□□□□□ -1.31
RTTN-219ENST00000640525 KIF24Q5T7B8 1368 aa6.85□□□□□ -1.31
RTTN-219ENST00000640525 ERBB3P21860 1342 aa6.85□□□□□ -1.31
RTTN-219ENST00000640525 LARP1Q6PKG0 1096 aaKnown RBP6.85□□□□□ -1.31
RTTN-219ENST00000640525 C8orf37Q96NL8 207 aa6.85□□□□□ -1.31
RTTN-219ENST00000640525 USP35Q9P2H5 1018 aa6.85□□□□□ -1.31
RTTN-219ENST00000640525 BLMP54132 1417 aaPredicted RBP6.85□□□□□ -1.31
RTTN-219ENST00000640525 LRP6O75581 1613 aa6.85□□□□□ -1.31
RTTN-219ENST00000640525 IGSF1Q8N6C5 1336 aa6.85□□□□□ -1.31
RTTN-219ENST00000640525 TCP11L2Q8N4U5 519 aa6.85□□□□□ -1.31
RTTN-219ENST00000640525 RUNDC1Q96C34 613 aa6.85□□□□□ -1.31
RTTN-219ENST00000640525 PLEKHF1Q96S99 279 aa6.85□□□□□ -1.31
RTTN-219ENST00000640525 FCHSD2O94868 740 aa6.84□□□□□ -1.31
RTTN-219ENST00000640525 CENPBP07199 599 aaPredicted RBP6.84□□□□□ -1.31
RTTN-219ENST00000640525 MEX3CQ5U5Q3 659 aaKnown RBP6.84□□□□□ -1.31
RTTN-219ENST00000640525 TOM1L2Q6ZVM7 507 aa6.84□□□□□ -1.31
RTTN-219ENST00000640525 SPNS2Q8IVW8 549 aa6.84□□□□□ -1.31
RTTN-219ENST00000640525 NGLY1Q96IV0 654 aa6.84□□□□□ -1.31
RTTN-219ENST00000640525 LMO7Q8WWI1 1683 aa6.84□□□□□ -1.31
RTTN-219ENST00000640525 MAPK8IP3Q9UPT6 1336 aa6.84□□□□□ -1.32
RTTN-219ENST00000640525 COL5A2P05997 1499 aaPredicted RBP6.84□□□□□ -1.32
RTTN-219ENST00000640525 RGPD1P0DJD0 1748 aa6.83□□□□□ -1.32
RTTN-219ENST00000640525 SNPHO15079 494 aa6.83□□□□□ -1.32
RTTN-219ENST00000640525 OSBPP22059 807 aa6.83□□□□□ -1.32
RTTN-219ENST00000640525 FBXO41Q8TF61 875 aa6.83□□□□□ -1.32
RTTN-219ENST00000640525 ANO8Q9HCE9 1232 aaPredicted RBP6.83□□□□□ -1.32
RTTN-219ENST00000640525 COL14A1Q05707 1796 aaKnown RBP6.83□□□□□ -1.32
RTTN-219ENST00000640525 SPATA31A6Q5VVP1 1343 aa6.82□□□□□ -1.32
RTTN-219ENST00000640525 WDR17Q8IZU2 1322 aa6.82□□□□□ -1.32
RTTN-219ENST00000640525 MARVELD3Q96A59 401 aa6.82□□□□□ -1.32
RTTN-219ENST00000640525 CCDC9Q9Y3X0 531 aaKnown RBP6.82□□□□□ -1.32
RTTN-219ENST00000640525 PLCH1Q4KWH8 1693 aa6.82□□□□□ -1.32
RTTN-219ENST00000640525 TBC1D12O60347 775 aa6.82□□□□□ -1.32
RTTN-219ENST00000640525 NEFMP07197 916 aa6.82□□□□□ -1.32
RTTN-219ENST00000640525 TMPOP42166 694 aaKnown RBP6.82□□□□□ -1.32
RTTN-219ENST00000640525 RIPK4P57078 832 aa6.82□□□□□ -1.32
RTTN-219ENST00000640525 MTHFSDQ2M296 383 aaKnown RBP6.82□□□□□ -1.32
RTTN-219ENST00000640525 PCDHGA10Q9Y5H3 936 aa6.82□□□□□ -1.32
RTTN-219ENST00000640525 DCTN1Q14203 1278 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms