RNA–Protein interactions for RNA: ENST00000640483.1

CACNA1D-230, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

APPRIS ALT2 TSL 5

Gene CACNA1D, Length 5,673 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-230ENST00000640483 STK32BQ9NY57 414 aa11.12□□□□□ -0.63
CACNA1D-230ENST00000640483 SHANK2Q9UPX8 1470 aa11.12□□□□□ -0.63
CACNA1D-230ENST00000640483 SHROOM2Q13796 1616 aa11.12□□□□□ -0.63
CACNA1D-230ENST00000640483 ZCRB1Q8TBF4 217 aaKnown RBP11.11□□□□□ -0.63
CACNA1D-230ENST00000640483 IFT57Q9NWB7 429 aa11.11□□□□□ -0.63
CACNA1D-230ENST00000640483 MIS18AQ9NYP9 233 aa11.11□□□□□ -0.63
CACNA1D-230ENST00000640483 EMILIN1Q9Y6C2 1016 aa11.11□□□□□ -0.63
CACNA1D-230ENST00000640483 POLR3DP05423 398 aaPredicted RBP11.11□□□□□ -0.63
CACNA1D-230ENST00000640483 NOP2P46087 812 aaKnown RBP11.11□□□□□ -0.63
CACNA1D-230ENST00000640483 PDE3AQ14432 1141 aa11.11□□□□□ -0.63
CACNA1D-230ENST00000640483 GPR162Q16538 588 aa11.11□□□□□ -0.63
CACNA1D-230ENST00000640483 PLCD3Q8N3E9 789 aa11.11□□□□□ -0.63
CACNA1D-230ENST00000640483 NUP133Q8WUM0 1156 aa11.11□□□□□ -0.63
CACNA1D-230ENST00000640483 PKNOX2Q96KN3 472 aa11.11□□□□□ -0.63
CACNA1D-230ENST00000640483 SCAF11Q99590 1463 aaKnown RBP11.11□□□□□ -0.63
CACNA1D-230ENST00000640483 CDC5LQ99459 802 aaKnown RBP11.11□□□□□ -0.63
CACNA1D-230ENST00000640483 MAPKBP1O60336 1514 aa11.11□□□□□ -0.63
CACNA1D-230ENST00000640483 NSD2O96028 1365 aa11.1□□□□□ -0.63
CACNA1D-230ENST00000640483 RIMBP3CA6NJZ7 1639 aa11.1□□□□□ -0.63
CACNA1D-230ENST00000640483 RIMBP3BA6NNM3 1639 aa11.1□□□□□ -0.63
CACNA1D-230ENST00000640483 RIMBP3Q9UFD9 1639 aa11.1□□□□□ -0.63
CACNA1D-230ENST00000640483 OLFM4Q6UX06 510 aa11.1□□□□□ -0.63
CACNA1D-230ENST00000640483 ATF7IPQ6VMQ6 1270 aa11.1□□□□□ -0.63
CACNA1D-230ENST00000640483 PODXL2Q9NZ53 605 aa11.1□□□□□ -0.63
CACNA1D-230ENST00000640483 NUCB2P80303 420 aa11.1□□□□□ -0.63
CACNA1D-230ENST00000640483 SASS6Q6UVJ0 657 aa11.1□□□□□ -0.63
CACNA1D-230ENST00000640483 ATP2B1P20020 1258 aa11.1□□□□□ -0.63
CACNA1D-230ENST00000640483 ZCCHC11Q5TAX3 1644 aaKnown RBP11.1□□□□□ -0.63
CACNA1D-230ENST00000640483 MAGI2Q86UL8 1455 aa11.1□□□□□ -0.63
CACNA1D-230ENST00000640483 RDXP35241 583 aaKnown RBP11.09□□□□□ -0.63
CACNA1D-230ENST00000640483 ZNF76P36508 570 aa11.09□□□□□ -0.63
CACNA1D-230ENST00000640483 TCOF1Q13428 1488 aaKnown RBP11.09□□□□□ -0.63
CACNA1D-230ENST00000640483 CCDC97Q96F63 343 aaPredicted RBP11.09□□□□□ -0.63
CACNA1D-230ENST00000640483 ACSBG1Q96GR2 724 aa11.09□□□□□ -0.63
CACNA1D-230ENST00000640483 SYCP2Q9BX26 1530 aa11.09□□□□□ -0.63
CACNA1D-230ENST00000640483 ATP6V1AP38606 617 aa11.09□□□□□ -0.63
CACNA1D-230ENST00000640483 ANKRD1Q15327 319 aa11.09□□□□□ -0.63
CACNA1D-230ENST00000640483 NBPF6Q5VWK0 638 aa11.09□□□□□ -0.63
CACNA1D-230ENST00000640483 NBPF5PQ86XG9 351 aaPredicted RBP11.09□□□□□ -0.63
CACNA1D-230ENST00000640483 NBPF4Q96M43 638 aa11.09□□□□□ -0.63
CACNA1D-230ENST00000640483 C22orf23Q9BZE7 217 aa11.09□□□□□ -0.63
CACNA1D-230ENST00000640483 BAG6P46379 1132 aa11.09□□□□□ -0.63
CACNA1D-230ENST00000640483 DBF4Q9UBU7 674 aaPredicted RBP11.09□□□□□ -0.63
CACNA1D-230ENST00000640483 NEBLO76041 1014 aa11.09□□□□□ -0.63
CACNA1D-230ENST00000640483 CDCA7LQ96GN5 454 aa11.08□□□□□ -0.64
CACNA1D-230ENST00000640483 ZMYM3Q14202 1370 aa11.08□□□□□ -0.64
CACNA1D-230ENST00000640483 GPTP24298 496 aa11.08□□□□□ -0.64
CACNA1D-230ENST00000640483 PDCP20941 246 aa11.08□□□□□ -0.64
CACNA1D-230ENST00000640483 ATP10AO60312 1499 aa11.08□□□□□ -0.64
CACNA1D-230ENST00000640483 ABCC11Q96J66 1382 aa11.08□□□□□ -0.64
CACNA1D-230ENST00000640483 OFD1O75665 1012 aa11.08□□□□□ -0.64
CACNA1D-230ENST00000640483 CDKL5O76039 1030 aa11.08□□□□□ -0.64
CACNA1D-230ENST00000640483 ZNF396Q96N95 335 aaPredicted RBP11.08□□□□□ -0.64
CACNA1D-230ENST00000640483 CYP46A1Q9Y6A2 500 aa11.08□□□□□ -0.64
CACNA1D-230ENST00000640483 ARAP3Q8WWN8 1544 aa11.08□□□□□ -0.64
CACNA1D-230ENST00000640483 DESP17661 470 aa11.07□□□□□ -0.64
CACNA1D-230ENST00000640483 PPP4R3AQ6IN85 833 aa11.07□□□□□ -0.64
CACNA1D-230ENST00000640483 ZBTB3Q9H5J0 574 aa11.07□□□□□ -0.64
CACNA1D-230ENST00000640483 NOL7Q9UMY1 257 aaKnown RBP11.07□□□□□ -0.64
CACNA1D-230ENST00000640483 MAGI3Q5TCQ9 1506 aa11.07□□□□□ -0.64
CACNA1D-230ENST00000640483 BCAR3O75815 825 aa11.07□□□□□ -0.64
CACNA1D-230ENST00000640483 MCM2P49736 904 aa11.07□□□□□ -0.64
CACNA1D-230ENST00000640483 ZFYVE27Q5T4F4 411 aa11.07□□□□□ -0.64
CACNA1D-230ENST00000640483 RPAP2Q8IXW5 612 aaPredicted RBP11.07□□□□□ -0.64
CACNA1D-230ENST00000640483 MAP4K4O95819 1239 aaPredicted RBP11.07□□□□□ -0.64
CACNA1D-230ENST00000640483 SNRPA1P09661 255 aaKnown RBP11.07□□□□□ -0.64
CACNA1D-230ENST00000640483 MAP3K12Q12852 859 aa11.07□□□□□ -0.64
CACNA1D-230ENST00000640483 TNIP1Q15025 636 aa11.07□□□□□ -0.64
CACNA1D-230ENST00000640483 MKNK2Q9HBH9 465 aa11.07□□□□□ -0.64
CACNA1D-230ENST00000640483 SETDB2Q96T68 719 aa11.07□□□□□ -0.64
CACNA1D-230ENST00000640483 TFCP2L1Q9NZI6 479 aa11.07□□□□□ -0.64
CACNA1D-230ENST00000640483 PARP3Q9Y6F1 533 aa11.07□□□□□ -0.64
CACNA1D-230ENST00000640483 IL2RBP14784 551 aa11.06□□□□□ -0.64
CACNA1D-230ENST00000640483 ERCC6L2Q5T890 1561 aa11.06□□□□□ -0.64
CACNA1D-230ENST00000640483 DCTN1Q14203 1278 aa11.06□□□□□ -0.64
CACNA1D-230ENST00000640483 IMMTQ16891 758 aaKnown RBP11.06□□□□□ -0.64
CACNA1D-230ENST00000640483 NAT10Q9H0A0 1025 aaKnown RBP11.06□□□□□ -0.64
CACNA1D-230ENST00000640483 RAB11FIP3O75154 756 aa11.06□□□□□ -0.64
CACNA1D-230ENST00000640483 DNAAF4Q8WXU2 420 aa11.06□□□□□ -0.64
CACNA1D-230ENST00000640483 CWC25Q9NXE8 425 aaPredicted RBP11.06□□□□□ -0.64
CACNA1D-230ENST00000640483 ZRANB1Q9UGI0 708 aa11.06□□□□□ -0.64
CACNA1D-230ENST00000640483 MYO5CQ9NQX4 1742 aa11.05□□□□□ -0.64
CACNA1D-230ENST00000640483 LDHCP07864 332 aa11.05□□□□□ -0.64
CACNA1D-230ENST00000640483 NAP1L1P55209 391 aaKnown RBP11.05□□□□□ -0.64
CACNA1D-230ENST00000640483 MVPQ14764 893 aaKnown RBP11.05□□□□□ -0.64
CACNA1D-230ENST00000640483 JMYQ8N9B5 988 aa11.05□□□□□ -0.64
CACNA1D-230ENST00000640483 HDAC9Q9UKV0 1011 aa11.05□□□□□ -0.64
CACNA1D-230ENST00000640483 PPIP5K1Q6PFW1 1433 aa11.05□□□□□ -0.64
CACNA1D-230ENST00000640483 MATR3P43243 847 aaKnown RBP eCLIP11.05□□□□□ -0.64
CACNA1D-230ENST00000640483 SEC63Q9UGP8 760 aaKnown RBP11.05□□□□□ -0.64
CACNA1D-230ENST00000640483 SDF4Q9BRK5 362 aa11.05□□□□□ -0.64
CACNA1D-230ENST00000640483 CHMP5Q9NZZ3 219 aa11.05□□□□□ -0.64
CACNA1D-230ENST00000640483 PDZRN3Q9UPQ7 1066 aa11.05□□□□□ -0.64
CACNA1D-230ENST00000640483 TRAPPC8Q9Y2L5 1435 aa11.05□□□□□ -0.64
CACNA1D-230ENST00000640483 SYCP1Q15431 976 aa11.04□□□□□ -0.64
CACNA1D-230ENST00000640483 THUMPD2Q9BTF0 503 aaKnown RBP11.04□□□□□ -0.64
CACNA1D-230ENST00000640483 MAGEC2Q9UBF1 373 aaPredicted RBP11.04□□□□□ -0.64
CACNA1D-230ENST00000640483 ANKRD36BQ8N2N9 1353 aa11.04□□□□□ -0.64
CACNA1D-230ENST00000640483 CCDC152Q4G0S7 254 aa11.04□□□□□ -0.64
CACNA1D-230ENST00000640483 SPTY2D1Q68D10 685 aaPredicted RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms