RNA–Protein interactions for RNA: ENST00000640451.1

MED17-225, Transcript of mediator complex subunit 17, human

TSL 5

Gene MED17, Length 1,704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MED17-225	ENST00000640451	CDCA7	Q9BWT1	371 aa	Predicted RBP	31.27	■■■□□ 2.6
MED17-225	ENST00000640451	SLC52A2	Q9HAB3	445 aa		31.27	■■■□□ 2.6
MED17-225	ENST00000640451	SMC4	Q9NTJ3	1288 aa		31.27	■■■□□ 2.6
MED17-225	ENST00000640451	BTBD11	A6QL63	1104 aa		31.25	■■■□□ 2.59
MED17-225	ENST00000640451	BRPF1	P55201	1214 aa	Predicted RBP	31.25	■■■□□ 2.59
MED17-225	ENST00000640451	VPS72	Q15906	364 aa		31.24	■■■□□ 2.59
MED17-225	ENST00000640451	TNS2	Q63HR2	1409 aa		31.24	■■■□□ 2.59
MED17-225	ENST00000640451	C20orf194	Q5TEA3	1177 aa		31.23	■■■□□ 2.59
MED17-225	ENST00000640451	BARGIN	Q6ZT62	677 aa		31.23	■■■□□ 2.59
MED17-225	ENST00000640451	SOS1	Q07889	1333 aa	Predicted RBP	31.22	■■■□□ 2.59
MED17-225	ENST00000640451	TOGARAM1	Q9Y4F4	1720 aa		31.22	■■■□□ 2.59
MED17-225	ENST00000640451	DDX54	Q8TDD1	881 aa	Known RBP	31.22	■■■□□ 2.59
MED17-225	ENST00000640451	EIF4A1	P60842	406 aa	Known RBP	31.21	■■■□□ 2.59
MED17-225	ENST00000640451	MEX3C	Q5U5Q3	659 aa	Known RBP	31.2	■■■□□ 2.58
MED17-225	ENST00000640451	FRAT1	Q92837	279 aa	Predicted RBP	31.2	■■■□□ 2.58
MED17-225	ENST00000640451	USP21	Q9UK80	565 aa		31.2	■■■□□ 2.58
MED17-225	ENST00000640451	CCDC9	Q9Y3X0	531 aa	Known RBP	31.2	■■■□□ 2.58
MED17-225	ENST00000640451	KCNQ3	O43525	872 aa		31.19	■■■□□ 2.58
MED17-225	ENST00000640451	MRPL50	Q8N5N7	158 aa	Known RBP	31.19	■■■□□ 2.58
MED17-225	ENST00000640451	NFATC2IP	Q8NCF5	419 aa		31.19	■■■□□ 2.58
MED17-225	ENST00000640451	EXOC5	O00471	708 aa		31.18	■■■□□ 2.58
MED17-225	ENST00000640451	PDE3A	Q14432	1141 aa		31.18	■■■□□ 2.58
MED17-225	ENST00000640451	KIF16B	Q96L93	1317 aa		31.18	■■■□□ 2.58
MED17-225	ENST00000640451	ERVV-2	B6SEH9	535 aa		31.18	■■■□□ 2.58
MED17-225	ENST00000640451	CANX	P27824	592 aa	Known RBP	31.18	■■■□□ 2.58
MED17-225	ENST00000640451	HEG1	Q9ULI3	1381 aa		31.16	■■■□□ 2.58
MED17-225	ENST00000640451	CABP4	P57796	275 aa		31.15	■■■□□ 2.58
MED17-225	ENST00000640451	ZKSCAN2	Q63HK3	967 aa		31.15	■■■□□ 2.58
MED17-225	ENST00000640451	EXOC6	Q8TAG9	804 aa		31.15	■■■□□ 2.58
MED17-225	ENST00000640451	CACNA1F	O60840	1977 aa		31.15	■■■□□ 2.58
MED17-225	ENST00000640451	HOXB7	P09629	217 aa		31.14	■■■□□ 2.58
MED17-225	ENST00000640451	CRBN	Q96SW2	442 aa		31.14	■■■□□ 2.58
MED17-225	ENST00000640451	NOB1	Q9ULX3	412 aa	Known RBP	31.14	■■■□□ 2.58
MED17-225	ENST00000640451	AFF2	P51816	1311 aa		31.14	■■■□□ 2.58
MED17-225	ENST00000640451	ZNF790	Q6PG37	636 aa		31.13	■■■□□ 2.57
MED17-225	ENST00000640451	PAPPA	Q13219	1627 aa		31.13	■■■□□ 2.57
MED17-225	ENST00000640451	DDB1	Q16531	1140 aa		31.12	■■■□□ 2.57
MED17-225	ENST00000640451	ITGB4	P16144	1822 aa		31.12	■■■□□ 2.57
MED17-225	ENST00000640451	TCERG1	O14776	1098 aa	Known RBP	31.12	■■■□□ 2.57
MED17-225	ENST00000640451	PPP4R2	Q9NY27	417 aa		31.12	■■■□□ 2.57
MED17-225	ENST00000640451	TNN	Q9UQP3	1299 aa		31.11	■■■□□ 2.57
MED17-225	ENST00000640451	ATF7IP	Q6VMQ6	1270 aa		31.1	■■■□□ 2.57
MED17-225	ENST00000640451	UBR2	Q8IWV8	1755 aa		31.1	■■■□□ 2.57
MED17-225	ENST00000640451	GLI3	P10071	1580 aa		31.1	■■■□□ 2.57
MED17-225	ENST00000640451	IPO8	O15397	1037 aa	Known RBP	31.1	■■■□□ 2.57
MED17-225	ENST00000640451	TRIM27	P14373	513 aa		31.1	■■■□□ 2.57
MED17-225	ENST00000640451	SLC39A6	Q13433	755 aa		31.1	■■■□□ 2.57
MED17-225	ENST00000640451	THSD7A	Q9UPZ6	1657 aa		31.09	■■■□□ 2.57
MED17-225	ENST00000640451	ATRN	O75882	1429 aa		31.09	■■■□□ 2.57
MED17-225	ENST00000640451	PANK1	Q8TE04	598 aa		31.09	■■■□□ 2.57
MED17-225	ENST00000640451	ARHGAP45	Q92619	1136 aa		31.09	■■■□□ 2.57
MED17-225	ENST00000640451	RLBP1	P12271	317 aa		31.08	■■■□□ 2.57
MED17-225	ENST00000640451	FAM98C	Q17RN3	349 aa	Known RBP	31.08	■■■□□ 2.57
MED17-225	ENST00000640451	CCDC30	Q5VVM6	783 aa		31.07	■■■□□ 2.56
MED17-225	ENST00000640451	GIGYF1	O75420	1035 aa	Predicted RBP	31.07	■■■□□ 2.56
MED17-225	ENST00000640451	MS4A1	P11836	297 aa		31.07	■■■□□ 2.56
MED17-225	ENST00000640451	C5	P01031	1676 aa		31.06	■■■□□ 2.56
MED17-225	ENST00000640451	DOT1L	Q8TEK3	1739 aa		31.06	■■■□□ 2.56
MED17-225	ENST00000640451	DZIP1L	Q8IYY4	767 aa	Known RBP	31.05	■■■□□ 2.56
MED17-225	ENST00000640451	HDGFL1	Q5TGJ6	251 aa		31.04	■■■□□ 2.56
MED17-225	ENST00000640451	CLUAP1	Q96AJ1	413 aa		31.04	■■■□□ 2.56
MED17-225	ENST00000640451	SLC4A2	P04920	1241 aa		31.03	■■■□□ 2.56
MED17-225	ENST00000640451	TTC5	Q8N0Z6	440 aa		31.03	■■■□□ 2.56
MED17-225	ENST00000640451	MARCH10	Q8NA82	808 aa	Predicted RBP	31.03	■■■□□ 2.56
MED17-225	ENST00000640451	GJD4	Q96KN9	370 aa	Predicted RBP	31.03	■■■□□ 2.56
MED17-225	ENST00000640451	CHMP4A	Q9BY43	222 aa		31.03	■■■□□ 2.56
MED17-225	ENST00000640451	ZNF496	Q96IT1	587 aa	Predicted RBP	31.02	■■■□□ 2.56
MED17-225	ENST00000640451	STK31	Q9BXU1	1019 aa		31.02	■■■□□ 2.56
MED17-225	ENST00000640451	TRPC5	Q9UL62	973 aa	Predicted RBP	31.02	■■■□□ 2.56
MED17-225	ENST00000640451	FTSJ3	Q8IY81	847 aa	Known RBP	31.01	■■■□□ 2.56
MED17-225	ENST00000640451	TMOD3	Q9NYL9	352 aa		31.01	■■■□□ 2.56
MED17-225	ENST00000640451	COG6	Q9Y2V7	657 aa		31.01	■■■□□ 2.56
MED17-225	ENST00000640451	KCP	Q6ZWJ8	1503 aa		31.01	■■■□□ 2.55
MED17-225	ENST00000640451	KAT6B	Q8WYB5	2073 aa		31	■■■□□ 2.55
MED17-225	ENST00000640451	BCL9	O00512	1426 aa		31	■■■□□ 2.55
MED17-225	ENST00000640451	NECTIN2	Q92692	538 aa		30.99	■■■□□ 2.55
MED17-225	ENST00000640451	FMNL2	Q96PY5	1086 aa		30.99	■■■□□ 2.55
MED17-225	ENST00000640451	RGS12	O14924	1447 aa		30.99	■■■□□ 2.55
MED17-225	ENST00000640451	PTPRC	P08575	1304 aa		30.99	■■■□□ 2.55
MED17-225	ENST00000640451	LAMB4	A4D0S4	1761 aa		30.98	■■■□□ 2.55
MED17-225	ENST00000640451	PRAMEF22	A3QJZ6	481 aa		30.98	■■■□□ 2.55
MED17-225	ENST00000640451	PIGB	Q92521	554 aa		30.98	■■■□□ 2.55
MED17-225	ENST00000640451	API5	Q9BZZ5	524 aa	Known RBP	30.98	■■■□□ 2.55
MED17-225	ENST00000640451	ABCC4	O15439	1325 aa		30.97	■■■□□ 2.55
MED17-225	ENST00000640451	EIF2S2	P20042	333 aa	Known RBP	30.97	■■■□□ 2.55
MED17-225	ENST00000640451	MVP	Q14764	893 aa	Known RBP	30.97	■■■□□ 2.55
MED17-225	ENST00000640451	G2E3	Q7L622	706 aa		30.96	■■■□□ 2.55
MED17-225	ENST00000640451	FBXO41	Q8TF61	875 aa		30.95	■■■□□ 2.55
MED17-225	ENST00000640451	ONECUT3	O60422	494 aa	Predicted RBP	30.95	■■■□□ 2.54
MED17-225	ENST00000640451	SNRPA1	P09661	255 aa	Known RBP	30.95	■■■□□ 2.54
MED17-225	ENST00000640451	B4GALNT3	Q6L9W6	998 aa		30.94	■■■□□ 2.54
MED17-225	ENST00000640451	TMEM57	Q8N5G2	664 aa		30.94	■■■□□ 2.54
MED17-225	ENST00000640451	CHPF2	Q9P2E5	772 aa		30.93	■■■□□ 2.54
MED17-225	ENST00000640451	QTRT2	Q9H974	415 aa	Known RBP	30.93	■■■□□ 2.54
MED17-225	ENST00000640451	FLII	Q13045	1269 aa		30.92	■■■□□ 2.54
MED17-225	ENST00000640451	PRIM1	P49642	420 aa	Known RBP	30.9	■■■□□ 2.54
MED17-225	ENST00000640451	DBF4	Q9UBU7	674 aa	Predicted RBP	30.9	■■■□□ 2.54
MED17-225	ENST00000640451	AAMP	Q13685	434 aa		30.9	■■■□□ 2.54
MED17-225	ENST00000640451	CCDC136	Q96JN2	1154 aa		30.9	■■■□□ 2.54
MED17-225	ENST00000640451	ATG3	Q9NT62	314 aa		30.9	■■■□□ 2.54

Retrieved 100 of 20,778 RNA–protein pairs in 165.6 ms