RNA–Protein interactions for RNA: ENST00000640410.1

SETD1A-203, Transcript of SET domain containing 1A, humanhuman

TSL 3

Gene SETD1A, Length 718 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SETD1A-203ENST00000640410 AK7Q96M32 723 aa22.15■■□□□ 1.14
SETD1A-203ENST00000640410 UBR3Q6ZT12 1888 aa22.14■■□□□ 1.13
SETD1A-203ENST00000640410 ERVV-2B6SEH9 535 aa22.14■■□□□ 1.13
SETD1A-203ENST00000640410 ITPK1Q13572 414 aa22.14■■□□□ 1.13
SETD1A-203ENST00000640410 DCAF5Q96JK2 942 aa22.14■■□□□ 1.13
SETD1A-203ENST00000640410 SMIM5Q71RC9 77 aa22.13■■□□□ 1.13
SETD1A-203ENST00000640410 FLAD1Q8NFF5 587 aa22.13■■□□□ 1.13
SETD1A-203ENST00000640410 PHF14O94880 888 aa22.11■■□□□ 1.13
SETD1A-203ENST00000640410 ATP6V1AP38606 617 aa22.11■■□□□ 1.13
SETD1A-203ENST00000640410 NPC1L1Q9UHC9 1359 aa22.11■■□□□ 1.13
SETD1A-203ENST00000640410 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.1■■□□□ 1.13
SETD1A-203ENST00000640410 C1orf141Q5JVX7 400 aa22.1■■□□□ 1.13
SETD1A-203ENST00000640410 CNGB1Q14028 1251 aaPredicted RBP22.09■■□□□ 1.13
SETD1A-203ENST00000640410 NLGN2Q8NFZ4 835 aa22.09■■□□□ 1.13
SETD1A-203ENST00000640410 SLC4A9Q96Q91 983 aa22.09■■□□□ 1.13
SETD1A-203ENST00000640410 CABP4P57796 275 aa22.08■■□□□ 1.13
SETD1A-203ENST00000640410 HMOX1P09601 288 aa22.07■■□□□ 1.12
SETD1A-203ENST00000640410 SSFA2P28290 1259 aa22.07■■□□□ 1.12
SETD1A-203ENST00000640410 GNPATO15228 680 aa22.06■■□□□ 1.12
SETD1A-203ENST00000640410 RBM42Q9BTD8 480 aaKnown RBP22.06■■□□□ 1.12
SETD1A-203ENST00000640410 COL3A1P02461 1466 aaPredicted RBP22.06■■□□□ 1.12
SETD1A-203ENST00000640410 DIAPH1O60610 1272 aaKnown RBP22.05■■□□□ 1.12
SETD1A-203ENST00000640410 SCN11AQ9UI33 1791 aa22.04■■□□□ 1.12
SETD1A-203ENST00000640410 ZNF831Q5JPB2 1677 aa22.04■■□□□ 1.12
SETD1A-203ENST00000640410 GOLGB1Q14789 3259 aaKnown RBP22.04■■□□□ 1.12
SETD1A-203ENST00000640410 GPR162Q16538 588 aa22.03■■□□□ 1.12
SETD1A-203ENST00000640410 AKAP4Q5JQC9 854 aa22.03■■□□□ 1.12
SETD1A-203ENST00000640410 NFATC2IPQ8NCF5 419 aa22.03■■□□□ 1.12
SETD1A-203ENST00000640410 COL5A3P25940 1745 aaPredicted RBP22.03■■□□□ 1.12
SETD1A-203ENST00000640410 CHD4Q14839 1912 aa22.02■■□□□ 1.12
SETD1A-203ENST00000640410 PELP1Q8IZL8 1130 aaKnown RBP22.01■■□□□ 1.11
SETD1A-203ENST00000640410 CNTNAP4Q9C0A0 1308 aa22■■□□□ 1.11
SETD1A-203ENST00000640410 MYH14Q7Z406 1995 aaKnown RBP21.99■■□□□ 1.11
SETD1A-203ENST00000640410 PTCD1O75127 700 aaKnown RBP21.99■■□□□ 1.11
SETD1A-203ENST00000640410 MTHFSDQ2M296 383 aaKnown RBP21.99■■□□□ 1.11
SETD1A-203ENST00000640410 LGR6Q9HBX8 967 aa21.99■■□□□ 1.11
SETD1A-203ENST00000640410 MRC1P22897 1456 aa21.98■■□□□ 1.11
SETD1A-203ENST00000640410 RC3H1Q5TC82 1133 aaKnown RBP21.98■■□□□ 1.11
SETD1A-203ENST00000640410 RTCBQ9Y3I0 505 aaKnown RBP21.98■■□□□ 1.11
SETD1A-203ENST00000640410 CD2APQ9Y5K6 639 aa21.98■■□□□ 1.11
SETD1A-203ENST00000640410 VIRMAQ69YN4 1812 aaKnown RBP21.97■■□□□ 1.11
SETD1A-203ENST00000640410 RNMTO43148 476 aaKnown RBP21.97■■□□□ 1.11
SETD1A-203ENST00000640410 SLC52A2Q9HAB3 445 aa21.97■■□□□ 1.11
SETD1A-203ENST00000640410 TJP1Q07157 1748 aa21.97■■□□□ 1.11
SETD1A-203ENST00000640410 U2SURPO15042 1029 aaKnown RBP21.96■■□□□ 1.11
SETD1A-203ENST00000640410 YBX3P16989 372 aaKnown RBP eCLIP21.96■■□□□ 1.11
SETD1A-203ENST00000640410 ADAMTS7Q9UKP4 1686 aa21.95■■□□□ 1.1
SETD1A-203ENST00000640410 RPS6KA4O75676 772 aa21.95■■□□□ 1.1
SETD1A-203ENST00000640410 TRAPPC3LQ5T215 181 aa21.95■■□□□ 1.1
SETD1A-203ENST00000640410 CICQ96RK0 1608 aaPredicted RBP21.95■■□□□ 1.1
SETD1A-203ENST00000640410 ADRA2BP18089 450 aa21.94■■□□□ 1.1
SETD1A-203ENST00000640410 ZNF784Q8NCA9 323 aaPredicted RBP21.94■■□□□ 1.1
SETD1A-203ENST00000640410 ARHGEF1Q92888 912 aaKnown RBP21.93■■□□□ 1.1
SETD1A-203ENST00000640410 C4AP0C0L4 1744 aa21.92■■□□□ 1.1
SETD1A-203ENST00000640410 MMP10P09238 476 aa21.92■■□□□ 1.1
SETD1A-203ENST00000640410 CRKLP46109 303 aaKnown RBP21.92■■□□□ 1.1
SETD1A-203ENST00000640410 SLC39A6Q13433 755 aa21.92■■□□□ 1.1
SETD1A-203ENST00000640410 KCPQ6ZWJ8 1503 aa21.9■■□□□ 1.1
SETD1A-203ENST00000640410 PPP2R1AP30153 589 aa21.9■■□□□ 1.1
SETD1A-203ENST00000640410 DNAJC10Q8IXB1 793 aa21.9■■□□□ 1.1
SETD1A-203ENST00000640410 GRIN3BO60391 1043 aa21.89■■□□□ 1.09
SETD1A-203ENST00000640410 GYS1P13807 737 aa21.89■■□□□ 1.09
SETD1A-203ENST00000640410 RFC4P35249 363 aa21.89■■□□□ 1.09
SETD1A-203ENST00000640410 GAS2L2Q8NHY3 880 aa21.89■■□□□ 1.09
SETD1A-203ENST00000640410 CFAP53Q96M91 514 aa21.89■■□□□ 1.09
SETD1A-203ENST00000640410 INTS5Q6P9B9 1019 aaKnown RBP21.88■■□□□ 1.09
SETD1A-203ENST00000640410 NLGN1Q8N2Q7 840 aa21.88■■□□□ 1.09
SETD1A-203ENST00000640410 RSPH6AQ9H0K4 717 aa21.87■■□□□ 1.09
SETD1A-203ENST00000640410 WWC3Q9ULE0 1092 aa21.87■■□□□ 1.09
SETD1A-203ENST00000640410 PRKAR2BP31323 418 aa21.86■■□□□ 1.09
SETD1A-203ENST00000640410 SRP68Q9UHB9 627 aaKnown RBP21.86■■□□□ 1.09
SETD1A-203ENST00000640410 IL17REQ8NFR9 667 aa21.85■■□□□ 1.09
SETD1A-203ENST00000640410 KIF13BQ9NQT8 1826 aa21.85■■□□□ 1.09
SETD1A-203ENST00000640410 UBR2Q8IWV8 1755 aa21.84■■□□□ 1.09
SETD1A-203ENST00000640410 USP42Q9H9J4 1324 aaKnown RBP21.84■■□□□ 1.09
SETD1A-203ENST00000640410 C10orf71Q711Q0 1435 aa21.84■■□□□ 1.09
SETD1A-203ENST00000640410 GNAT3A8MTJ3 354 aa21.84■■□□□ 1.09
SETD1A-203ENST00000640410 CYP19A1P11511 503 aaPredicted RBP21.84■■□□□ 1.09
SETD1A-203ENST00000640410 PHACTR3Q96KR7 559 aa21.84■■□□□ 1.09
SETD1A-203ENST00000640410 CCDC87Q9NVE4 849 aa21.84■■□□□ 1.09
SETD1A-203ENST00000640410 PXDNLA1KZ92 1463 aa21.83■■□□□ 1.09
SETD1A-203ENST00000640410 SOS1Q07889 1333 aaPredicted RBP21.83■■□□□ 1.09
SETD1A-203ENST00000640410 NUDCQ9Y266 331 aa21.83■■□□□ 1.09
SETD1A-203ENST00000640410 KIAA1551Q9HCM1 1747 aa21.83■■□□□ 1.08
SETD1A-203ENST00000640410 FKBP8Q14318 412 aa21.82■■□□□ 1.08
SETD1A-203ENST00000640410 SIPA1L3O60292 1781 aaPredicted RBP21.82■■□□□ 1.08
SETD1A-203ENST00000640410 U2AF1L5P0DN76 240 aaPredicted RBP21.81■■□□□ 1.08
SETD1A-203ENST00000640410 U2AF1Q01081 240 aaKnown RBP eCLIP21.81■■□□□ 1.08
SETD1A-203ENST00000640410 TEFQ10587 303 aa21.81■■□□□ 1.08
SETD1A-203ENST00000640410 VSIG10Q8N0Z9 540 aa21.81■■□□□ 1.08
SETD1A-203ENST00000640410 ZBTB1Q9Y2K1 713 aa21.81■■□□□ 1.08
SETD1A-203ENST00000640410 CEMIPQ8WUJ3 1361 aa21.8■■□□□ 1.08
SETD1A-203ENST00000640410 DIEXFQ68CQ4 756 aaKnown RBP21.8■■□□□ 1.08
SETD1A-203ENST00000640410 TTC5Q8N0Z6 440 aa21.8■■□□□ 1.08
SETD1A-203ENST00000640410 PARP3Q9Y6F1 533 aa21.8■■□□□ 1.08
SETD1A-203ENST00000640410 DDR1Q08345 913 aa21.79■■□□□ 1.08
SETD1A-203ENST00000640410 N4BP2Q86UW6 1770 aaPredicted RBP21.79■■□□□ 1.08
SETD1A-203ENST00000640410 ZNF496Q96IT1 587 aaPredicted RBP21.78■■□□□ 1.08
SETD1A-203ENST00000640410 COL15A1P39059 1388 aa21.77■■□□□ 1.08
SETD1A-203ENST00000640410 TGFB2P61812 414 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms