RNA–Protein interactions for RNA: ENST00000640317.1

GABRD-214, Transcript of gamma-aminobutyric acid type A receptor delta subunit, humanhuman

TSL 5

Gene GABRD, Length 1,578 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRD-214ENST00000640317 DDX54Q8TDD1 881 aaKnown RBP28.15■■■□□ 2.1
GABRD-214ENST00000640317 THRAP3Q9Y2W1 955 aaKnown RBP28.15■■■□□ 2.1
GABRD-214ENST00000640317 NKX1-1Q15270 411 aaPredicted RBP28.14■■■□□ 2.1
GABRD-214ENST00000640317 ZKSCAN2Q63HK3 967 aa28.14■■■□□ 2.1
GABRD-214ENST00000640317 NOB1Q9ULX3 412 aaKnown RBP28.14■■■□□ 2.1
GABRD-214ENST00000640317 SPATA31A5Q5VU36 1347 aa28.14■■■□□ 2.09
GABRD-214ENST00000640317 SPATA31A7Q8IWB4 1347 aa28.14■■■□□ 2.09
GABRD-214ENST00000640317 TCERG1O14776 1098 aaKnown RBP28.13■■■□□ 2.09
GABRD-214ENST00000640317 KCNQ3O43525 872 aa28.13■■■□□ 2.09
GABRD-214ENST00000640317 FNBP4Q8N3X1 1017 aaPredicted RBP28.13■■■□□ 2.09
GABRD-214ENST00000640317 EIF4A1P60842 406 aaKnown RBP28.12■■■□□ 2.09
GABRD-214ENST00000640317 SHANK3Q9BYB0 1731 aa28.12■■■□□ 2.09
GABRD-214ENST00000640317 SIPA1L3O60292 1781 aaPredicted RBP28.12■■■□□ 2.09
GABRD-214ENST00000640317 KDM3BQ7LBC6 1761 aa28.12■■■□□ 2.09
GABRD-214ENST00000640317 NFATC2IPQ8NCF5 419 aa28.11■■■□□ 2.09
GABRD-214ENST00000640317 TNNQ9UQP3 1299 aa28.11■■■□□ 2.09
GABRD-214ENST00000640317 BCL9LQ86UU0 1499 aa28.11■■■□□ 2.09
GABRD-214ENST00000640317 CDCA7Q9BWT1 371 aaPredicted RBP28.11■■■□□ 2.09
GABRD-214ENST00000640317 KIF16BQ96L93 1317 aa28.11■■■□□ 2.09
GABRD-214ENST00000640317 PANK1Q8TE04 598 aa28.1■■■□□ 2.09
GABRD-214ENST00000640317 CCDC9Q9Y3X0 531 aaKnown RBP28.1■■■□□ 2.09
GABRD-214ENST00000640317 SOS1Q07889 1333 aaPredicted RBP28.1■■■□□ 2.09
GABRD-214ENST00000640317 IPO8O15397 1037 aaKnown RBP28.09■■■□□ 2.09
GABRD-214ENST00000640317 MRC1P22897 1456 aa28.09■■■□□ 2.09
GABRD-214ENST00000640317 EXOC5O00471 708 aa28.08■■■□□ 2.09
GABRD-214ENST00000640317 CABP4P57796 275 aa28.08■■■□□ 2.09
GABRD-214ENST00000640317 VPS72Q15906 364 aa28.07■■■□□ 2.08
GABRD-214ENST00000640317 ATF7IPQ6VMQ6 1270 aa28.07■■■□□ 2.08
GABRD-214ENST00000640317 ERVV-2B6SEH9 535 aa28.07■■■□□ 2.08
GABRD-214ENST00000640317 RLBP1P12271 317 aa28.07■■■□□ 2.08
GABRD-214ENST00000640317 MEX3CQ5U5Q3 659 aaKnown RBP28.07■■■□□ 2.08
GABRD-214ENST00000640317 MS4A1P11836 297 aa28.06■■■□□ 2.08
GABRD-214ENST00000640317 TRIM27P14373 513 aa28.06■■■□□ 2.08
GABRD-214ENST00000640317 BARGINQ6ZT62 677 aa28.06■■■□□ 2.08
GABRD-214ENST00000640317 CLUAP1Q96AJ1 413 aa28.06■■■□□ 2.08
GABRD-214ENST00000640317 WNK3Q9BYP7 1800 aa28.06■■■□□ 2.08
GABRD-214ENST00000640317 DZIP1LQ8IYY4 767 aaKnown RBP28.05■■■□□ 2.08
GABRD-214ENST00000640317 USP21Q9UK80 565 aa28.05■■■□□ 2.08
GABRD-214ENST00000640317 SLC39A6Q13433 755 aa28.04■■■□□ 2.08
GABRD-214ENST00000640317 ARHGAP45Q92619 1136 aa28.04■■■□□ 2.08
GABRD-214ENST00000640317 ZNF790Q6PG37 636 aa28.03■■■□□ 2.08
GABRD-214ENST00000640317 COG6Q9Y2V7 657 aa28.03■■■□□ 2.08
GABRD-214ENST00000640317 HOXB7P09629 217 aa28.03■■■□□ 2.08
GABRD-214ENST00000640317 CCDC30Q5VVM6 783 aa28.03■■■□□ 2.08
GABRD-214ENST00000640317 B4GALNT3Q6L9W6 998 aa28.03■■■□□ 2.08
GABRD-214ENST00000640317 HEG1Q9ULI3 1381 aa28.02■■■□□ 2.08
GABRD-214ENST00000640317 FTSJ3Q8IY81 847 aaKnown RBP28.02■■■□□ 2.08
GABRD-214ENST00000640317 SLC4A2P04920 1241 aa28.01■■■□□ 2.07
GABRD-214ENST00000640317 TNS2Q63HR2 1409 aa28.01■■■□□ 2.07
GABRD-214ENST00000640317 DDB1Q16531 1140 aa28■■■□□ 2.07
GABRD-214ENST00000640317 NECTIN2Q92692 538 aa27.99■■■□□ 2.07
GABRD-214ENST00000640317 STK31Q9BXU1 1019 aa27.99■■■□□ 2.07
GABRD-214ENST00000640317 GIGYF1O75420 1035 aaPredicted RBP27.99■■■□□ 2.07
GABRD-214ENST00000640317 HDGFL1Q5TGJ6 251 aa27.99■■■□□ 2.07
GABRD-214ENST00000640317 CCDC136Q96JN2 1154 aa27.98■■■□□ 2.07
GABRD-214ENST00000640317 EIF2S2P20042 333 aaKnown RBP27.97■■■□□ 2.07
GABRD-214ENST00000640317 TTC5Q8N0Z6 440 aa27.97■■■□□ 2.07
GABRD-214ENST00000640317 CHMP4AQ9BY43 222 aa27.97■■■□□ 2.07
GABRD-214ENST00000640317 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.97■■■□□ 2.07
GABRD-214ENST00000640317 AFF2P51816 1311 aa27.97■■■□□ 2.07
GABRD-214ENST00000640317 MVPQ14764 893 aaKnown RBP27.96■■■□□ 2.07
GABRD-214ENST00000640317 FAM98CQ17RN3 349 aaKnown RBP27.96■■■□□ 2.07
GABRD-214ENST00000640317 API5Q9BZZ5 524 aaKnown RBP27.96■■■□□ 2.07
GABRD-214ENST00000640317 G2E3Q7L622 706 aa27.94■■■□□ 2.06
GABRD-214ENST00000640317 TMEM57Q8N5G2 664 aa27.94■■■□□ 2.06
GABRD-214ENST00000640317 ZNF496Q96IT1 587 aaPredicted RBP27.94■■■□□ 2.06
GABRD-214ENST00000640317 TOGARAM1Q9Y4F4 1720 aa27.94■■■□□ 2.06
GABRD-214ENST00000640317 PTPRCP08575 1304 aa27.93■■■□□ 2.06
GABRD-214ENST00000640317 PRAMEF22A3QJZ6 481 aa27.93■■■□□ 2.06
GABRD-214ENST00000640317 TMOD3Q9NYL9 352 aa27.93■■■□□ 2.06
GABRD-214ENST00000640317 FMNL2Q96PY5 1086 aa27.92■■■□□ 2.06
GABRD-214ENST00000640317 MARCH10Q8NA82 808 aaPredicted RBP27.91■■■□□ 2.06
GABRD-214ENST00000640317 ABCC4O15439 1325 aa27.91■■■□□ 2.06
GABRD-214ENST00000640317 ITPRIPQ8IWB1 547 aa27.9■■■□□ 2.06
GABRD-214ENST00000640317 PIGBQ92521 554 aa27.9■■■□□ 2.06
GABRD-214ENST00000640317 SNRPA1P09661 255 aaKnown RBP27.89■■■□□ 2.05
GABRD-214ENST00000640317 AAMPQ13685 434 aa27.89■■■□□ 2.05
GABRD-214ENST00000640317 GJD4Q96KN9 370 aaPredicted RBP27.89■■■□□ 2.05
GABRD-214ENST00000640317 CHPF2Q9P2E5 772 aa27.89■■■□□ 2.05
GABRD-214ENST00000640317 DDX19BQ9UMR2 479 aa27.89■■■□□ 2.05
GABRD-214ENST00000640317 CACNA1FO60840 1977 aa27.88■■■□□ 2.05
GABRD-214ENST00000640317 FLIIQ13045 1269 aa27.88■■■□□ 2.05
GABRD-214ENST00000640317 RGS12O14924 1447 aa27.88■■■□□ 2.05
GABRD-214ENST00000640317 TRPC5Q9UL62 973 aaPredicted RBP27.87■■■□□ 2.05
GABRD-214ENST00000640317 ATRNO75882 1429 aa27.86■■■□□ 2.05
GABRD-214ENST00000640317 DBF4Q9UBU7 674 aaPredicted RBP27.86■■■□□ 2.05
GABRD-214ENST00000640317 PAPPAQ13219 1627 aa27.85■■■□□ 2.05
GABRD-214ENST00000640317 ITGB4P16144 1822 aa27.85■■■□□ 2.05
GABRD-214ENST00000640317 PHAXQ9H814 394 aaKnown RBP27.85■■■□□ 2.05
GABRD-214ENST00000640317 PRIM1P49642 420 aaKnown RBP27.84■■■□□ 2.05
GABRD-214ENST00000640317 USP16Q9Y5T5 823 aa27.84■■■□□ 2.05
GABRD-214ENST00000640317 BCL9O00512 1426 aa27.84■■■□□ 2.05
GABRD-214ENST00000640317 GLI3P10071 1580 aa27.83■■■□□ 2.05
GABRD-214ENST00000640317 FKBP5Q13451 457 aaPredicted RBP27.83■■■□□ 2.05
GABRD-214ENST00000640317 ASAP1Q9ULH1 1129 aa27.83■■■□□ 2.05
GABRD-214ENST00000640317 KCPQ6ZWJ8 1503 aa27.83■■■□□ 2.05
GABRD-214ENST00000640317 C5P01031 1676 aa27.83■■■□□ 2.05
GABRD-214ENST00000640317 A0A0G2JS52 829 aa27.82■■■□□ 2.04
GABRD-214ENST00000640317 ANXA1P04083 346 aa27.82■■■□□ 2.04
GABRD-214ENST00000640317 MYT1Q01538 1121 aa27.82■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms