RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 INHAP05111 366 aa10.38□□□□□ -0.75
CCDC7-216ENST00000640058 GTF2IP78347 998 aa10.38□□□□□ -0.75
CCDC7-216ENST00000640058 KRT76Q01546 638 aa10.38□□□□□ -0.75
CCDC7-216ENST00000640058 CNTNAP3BQ96NU0 1288 aa10.38□□□□□ -0.75
CCDC7-216ENST00000640058 CNTNAP3Q9BZ76 1288 aa10.38□□□□□ -0.75
CCDC7-216ENST00000640058 DYRK1BQ9Y463 629 aa10.38□□□□□ -0.75
CCDC7-216ENST00000640058 PCDHGA11Q9Y5H2 935 aa10.38□□□□□ -0.75
CCDC7-216ENST00000640058 USP17L3A6NCW0 530 aa10.37□□□□□ -0.75
CCDC7-216ENST00000640058 USP17L4A6NCW7 530 aa10.37□□□□□ -0.75
CCDC7-216ENST00000640058 GNASQ5JWF2 1037 aa10.37□□□□□ -0.75
CCDC7-216ENST00000640058 USP17L2Q6R6M4 530 aa10.37□□□□□ -0.75
CCDC7-216ENST00000640058 USP17L1Q7RTZ2 530 aa10.37□□□□□ -0.75
CCDC7-216ENST00000640058 TMEM229AB2RXF0 380 aa10.36□□□□□ -0.75
CCDC7-216ENST00000640058 C4orf17Q53FE4 359 aa10.36□□□□□ -0.75
CCDC7-216ENST00000640058 RNFT1Q5M7Z0 435 aa10.36□□□□□ -0.75
CCDC7-216ENST00000640058 ZSCAN1Q8NBB4 408 aa10.36□□□□□ -0.75
CCDC7-216ENST00000640058 ZNF837Q96EG3 531 aaPredicted RBP10.36□□□□□ -0.75
CCDC7-216ENST00000640058 GPAMQ9HCL2 828 aa10.36□□□□□ -0.75
CCDC7-216ENST00000640058 GPR25O00155 361 aa10.35□□□□□ -0.75
CCDC7-216ENST00000640058 ATP9BO43861 1147 aa10.35□□□□□ -0.75
CCDC7-216ENST00000640058 DBN1Q16643 649 aa10.35□□□□□ -0.75
CCDC7-216ENST00000640058 LZTS3O60299 673 aaPredicted RBP10.34□□□□□ -0.75
CCDC7-216ENST00000640058 LORP23490 312 aaPredicted RBP10.34□□□□□ -0.75
CCDC7-216ENST00000640058 CALR3Q96L12 384 aaKnown RBP10.34□□□□□ -0.75
CCDC7-216ENST00000640058 PLA2G4AP47712 749 aa10.33□□□□□ -0.76
CCDC7-216ENST00000640058 SMTNP53814 917 aa10.33□□□□□ -0.76
CCDC7-216ENST00000640058 WDR44Q5JSH3 913 aa10.33□□□□□ -0.76
CCDC7-216ENST00000640058 PPARGC1BQ86YN6 1023 aaKnown RBP10.33□□□□□ -0.76
CCDC7-216ENST00000640058 TRIM22Q8IYM9 498 aa10.33□□□□□ -0.76
CCDC7-216ENST00000640058 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.33□□□□□ -0.76
CCDC7-216ENST00000640058 RHBDD1Q8TEB9 315 aa10.33□□□□□ -0.76
CCDC7-216ENST00000640058 PLEKHM2Q8IWE5 1019 aa10.32□□□□□ -0.76
CCDC7-216ENST00000640058 GTPBP3Q969Y2 492 aaKnown RBP10.32□□□□□ -0.76
CCDC7-216ENST00000640058 TFIP11Q9UBB9 837 aaKnown RBP10.32□□□□□ -0.76
CCDC7-216ENST00000640058 STK17AQ9UEE5 414 aa10.32□□□□□ -0.76
CCDC7-216ENST00000640058 KIAA1024Q9UPX6 916 aa10.32□□□□□ -0.76
CCDC7-216ENST00000640058 F11P03951 625 aa10.31□□□□□ -0.76
CCDC7-216ENST00000640058 ZNF358Q9NW07 568 aa10.31□□□□□ -0.76
CCDC7-216ENST00000640058 ZNF777Q9ULD5 760 aaPredicted RBP10.31□□□□□ -0.76
CCDC7-216ENST00000640058 USP3Q9Y6I4 520 aa10.31□□□□□ -0.76
CCDC7-216ENST00000640058 A0A1B0GTH6 734 aa10.3□□□□□ -0.76
CCDC7-216ENST00000640058 H7C1W4 665 aa10.3□□□□□ -0.76
CCDC7-216ENST00000640058 CLDN10P78369 228 aa10.3□□□□□ -0.76
CCDC7-216ENST00000640058 TRIM50Q86XT4 487 aa10.3□□□□□ -0.76
CCDC7-216ENST00000640058 TPCN2Q8NHX9 752 aa10.3□□□□□ -0.76
CCDC7-216ENST00000640058 NUCKS1Q9H1E3 243 aaKnown RBP10.3□□□□□ -0.76
CCDC7-216ENST00000640058 MKRN1Q9UHC7 482 aaKnown RBP10.3□□□□□ -0.76
CCDC7-216ENST00000640058 A6NJY4 79 aa10.29□□□□□ -0.76
CCDC7-216ENST00000640058 MSX1P28360 303 aa10.29□□□□□ -0.76
CCDC7-216ENST00000640058 RUBCNLQ9H714 662 aa10.29□□□□□ -0.76
CCDC7-216ENST00000640058 PALM3A6NDB9 673 aaPredicted RBP10.28□□□□□ -0.76
CCDC7-216ENST00000640058 GAS6Q14393 721 aa10.28□□□□□ -0.76
CCDC7-216ENST00000640058 OGFOD1Q8N543 542 aa10.28□□□□□ -0.76
CCDC7-216ENST00000640058 ZNF594Q96JF6 807 aaPredicted RBP10.28□□□□□ -0.76
CCDC7-216ENST00000640058 SLC4A9Q96Q91 983 aa10.28□□□□□ -0.76
CCDC7-216ENST00000640058 DNAAF2Q9NVR5 837 aaKnown RBP10.28□□□□□ -0.76
CCDC7-216ENST00000640058 MAFBQ9Y5Q3 323 aaPredicted RBP10.28□□□□□ -0.76
CCDC7-216ENST00000640058 BACH1O14867 736 aa10.27□□□□□ -0.77
CCDC7-216ENST00000640058 ZBTB7BO15156 539 aaPredicted RBP10.27□□□□□ -0.77
CCDC7-216ENST00000640058 THBS1P07996 1170 aa10.27□□□□□ -0.77
CCDC7-216ENST00000640058 ATP1A2P50993 1020 aa10.27□□□□□ -0.77
CCDC7-216ENST00000640058 FOXR1Q6PIV2 292 aa10.27□□□□□ -0.77
CCDC7-216ENST00000640058 AIDAQ96BJ3 306 aa10.27□□□□□ -0.77
CCDC7-216ENST00000640058 GMCL1Q96IK5 515 aa10.27□□□□□ -0.77
CCDC7-216ENST00000640058 NIFKQ9BYG3 293 aaKnown RBP10.27□□□□□ -0.77
CCDC7-216ENST00000640058 CABP1Q9NZU7 370 aa10.27□□□□□ -0.77
CCDC7-216ENST00000640058 MTFR1Q15390 333 aa10.26□□□□□ -0.77
CCDC7-216ENST00000640058 TBCELQ5QJ74 424 aa10.26□□□□□ -0.77
CCDC7-216ENST00000640058 CCDC102BQ68D86 513 aa10.26□□□□□ -0.77
CCDC7-216ENST00000640058 PPP1R12CQ9BZL4 782 aa10.26□□□□□ -0.77
CCDC7-216ENST00000640058 PARP3Q9Y6F1 533 aa10.26□□□□□ -0.77
CCDC7-216ENST00000640058 CSB-PGBD3P0DP91 1061 aa10.25□□□□□ -0.77
CCDC7-216ENST00000640058 TNS4Q8IZW8 715 aa10.25□□□□□ -0.77
CCDC7-216ENST00000640058 PGBD3Q8N328 593 aa10.25□□□□□ -0.77
CCDC7-216ENST00000640058 TRERF1Q96PN7 1200 aa10.25□□□□□ -0.77
CCDC7-216ENST00000640058 IQSEC3Q9UPP2 1182 aaPredicted RBP10.25□□□□□ -0.77
CCDC7-216ENST00000640058 FAM181BA6NEQ2 426 aa10.24□□□□□ -0.77
CCDC7-216ENST00000640058 CDK2AP1O14519 115 aa10.24□□□□□ -0.77
CCDC7-216ENST00000640058 SFI1A8K8P3 1242 aa10.23□□□□□ -0.77
CCDC7-216ENST00000640058 RASA1P20936 1047 aa10.23□□□□□ -0.77
CCDC7-216ENST00000640058 ZNF295-AS1Q8N0V1 137 aa10.23□□□□□ -0.77
CCDC7-216ENST00000640058 WHAMMQ8TF30 809 aa10.23□□□□□ -0.77
CCDC7-216ENST00000640058 SCHIP1Q9P0W5 487 aaPredicted RBP10.23□□□□□ -0.77
CCDC7-216ENST00000640058 ADAMTS2O95450 1211 aa10.22□□□□□ -0.77
CCDC7-216ENST00000640058 LMOD1P29536 600 aaPredicted RBP10.22□□□□□ -0.77
CCDC7-216ENST00000640058 SLC9A9Q8IVB4 645 aa10.22□□□□□ -0.77
CCDC7-216ENST00000640058 GTF3C3Q9Y5Q9 886 aa10.22□□□□□ -0.77
CCDC7-216ENST00000640058 ATP4AP20648 1035 aa10.21□□□□□ -0.77
CCDC7-216ENST00000640058 EPHA4P54764 986 aa10.21□□□□□ -0.77
CCDC7-216ENST00000640058 EFHC2Q5JST6 749 aa10.21□□□□□ -0.77
CCDC7-216ENST00000640058 LARGE2Q8N3Y3 721 aa10.21□□□□□ -0.77
CCDC7-216ENST00000640058 SVOPQ8N4V2 548 aa10.21□□□□□ -0.77
CCDC7-216ENST00000640058 MBIPQ9NS73 344 aa10.21□□□□□ -0.77
CCDC7-216ENST00000640058 NBPF1Q3BBV0 1214 aa10.2□□□□□ -0.78
CCDC7-216ENST00000640058 ZNF385CQ66K41 422 aaPredicted RBP10.2□□□□□ -0.78
CCDC7-216ENST00000640058 TSEN2Q8NCE0 465 aaKnown RBP10.2□□□□□ -0.78
CCDC7-216ENST00000640058 ZDHHC1Q8WTX9 485 aa10.2□□□□□ -0.78
CCDC7-216ENST00000640058 RBM19Q9Y4C8 960 aaKnown RBP10.2□□□□□ -0.78
CCDC7-216ENST00000640058 IGF1RP08069 1367 aa10.19□□□□□ -0.78
CCDC7-216ENST00000640058 SLURP2P0DP57 97 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms