RNA–Protein interactions for RNA: ENST00000639841.1

NECAP1-220, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 1,982 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-220ENST00000639841 NLRP2Q9NX02 1062 aa10.01□□□□□ -0.81
NECAP1-220ENST00000639841 CEP170BQ9Y4F5 1589 aaPredicted RBP10.01□□□□□ -0.81
NECAP1-220ENST00000639841 CPS1P31327 1500 aa10.01□□□□□ -0.81
NECAP1-220ENST00000639841 DDX11L8A8MPP1 907 aa10.01□□□□□ -0.81
NECAP1-220ENST00000639841 CEBPAP49715 358 aaPredicted RBP10.01□□□□□ -0.81
NECAP1-220ENST00000639841 CLCN6P51797 869 aa10.01□□□□□ -0.81
NECAP1-220ENST00000639841 RBL2Q08999 1139 aa10.01□□□□□ -0.81
NECAP1-220ENST00000639841 PHF12Q96QT6 1004 aa10.01□□□□□ -0.81
NECAP1-220ENST00000639841 TGIF2Q9GZN2 237 aa10.01□□□□□ -0.81
NECAP1-220ENST00000639841 ZSWIM4Q9H7M6 989 aa10.01□□□□□ -0.81
NECAP1-220ENST00000639841 SPAG9O60271 1321 aaKnown RBP10□□□□□ -0.81
NECAP1-220ENST00000639841 TCOF1Q13428 1488 aaKnown RBP10□□□□□ -0.81
NECAP1-220ENST00000639841 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10□□□□□ -0.81
NECAP1-220ENST00000639841 RCCD1A6NED2 376 aa10□□□□□ -0.81
NECAP1-220ENST00000639841 P4HBP07237 508 aaKnown RBP10□□□□□ -0.81
NECAP1-220ENST00000639841 ARHGAP4P98171 946 aa10□□□□□ -0.81
NECAP1-220ENST00000639841 NR6A1Q15406 480 aa10□□□□□ -0.81
NECAP1-220ENST00000639841 ANKMY2Q8IV38 441 aa10□□□□□ -0.81
NECAP1-220ENST00000639841 GLYCTKQ8IVS8 523 aa10□□□□□ -0.81
NECAP1-220ENST00000639841 PDCD7Q8N8D1 485 aaKnown RBP10□□□□□ -0.81
NECAP1-220ENST00000639841 GMLQ99445 158 aa10□□□□□ -0.81
NECAP1-220ENST00000639841 RASA1P20936 1047 aa9.99□□□□□ -0.81
NECAP1-220ENST00000639841 TNNI2P48788 182 aa9.99□□□□□ -0.81
NECAP1-220ENST00000639841 FANCCQ00597 558 aa9.99□□□□□ -0.81
NECAP1-220ENST00000639841 SWI5Q1ZZU3 235 aa9.99□□□□□ -0.81
NECAP1-220ENST00000639841 ZNF746Q6NUN9 644 aaPredicted RBP9.99□□□□□ -0.81
NECAP1-220ENST00000639841 ZSCAN29Q8IWY8 852 aaPredicted RBP9.99□□□□□ -0.81
NECAP1-220ENST00000639841 ACBD3Q9H3P7 528 aa9.99□□□□□ -0.81
NECAP1-220ENST00000639841 NOP58Q9Y2X3 529 aaKnown RBP9.99□□□□□ -0.81
NECAP1-220ENST00000639841 ZMYM3Q14202 1370 aa9.99□□□□□ -0.81
NECAP1-220ENST00000639841 A2MP01023 1474 aa9.99□□□□□ -0.81
NECAP1-220ENST00000639841 MCCD1P59942 119 aaPredicted RBP9.99□□□□□ -0.81
NECAP1-220ENST00000639841 TAS1R3Q7RTX0 852 aa9.99□□□□□ -0.81
NECAP1-220ENST00000639841 RGL4Q8IZJ4 473 aa9.99□□□□□ -0.81
NECAP1-220ENST00000639841 HELBQ8NG08 1087 aaPredicted RBP9.99□□□□□ -0.81
NECAP1-220ENST00000639841 DCBLD2Q96PD2 775 aa9.99□□□□□ -0.81
NECAP1-220ENST00000639841 BCL11AQ9H165 835 aa9.99□□□□□ -0.81
NECAP1-220ENST00000639841 DMGDHQ9UI17 866 aaKnown RBP9.99□□□□□ -0.81
NECAP1-220ENST00000639841 FAN1Q9Y2M0 1017 aa9.99□□□□□ -0.81
NECAP1-220ENST00000639841 CCDC194A0A1B0GVG4 234 aa9.98□□□□□ -0.81
NECAP1-220ENST00000639841 CFAP99D6REC4 459 aa9.98□□□□□ -0.81
NECAP1-220ENST00000639841 LARP1Q6PKG0 1096 aaKnown RBP9.98□□□□□ -0.81
NECAP1-220ENST00000639841 TMEM87AQ8NBN3 555 aa9.98□□□□□ -0.81
NECAP1-220ENST00000639841 PTCD2Q8WV60 388 aaKnown RBP9.98□□□□□ -0.81
NECAP1-220ENST00000639841 BRINP2Q9C0B6 783 aa9.98□□□□□ -0.81
NECAP1-220ENST00000639841 CHPF2Q9P2E5 772 aa9.98□□□□□ -0.81
NECAP1-220ENST00000639841 CLTCQ00610 1675 aaKnown RBP9.98□□□□□ -0.81
NECAP1-220ENST00000639841 SYCP2Q9BX26 1530 aa9.98□□□□□ -0.81
NECAP1-220ENST00000639841 A2ML1A8K2U0 1454 aa9.98□□□□□ -0.81
NECAP1-220ENST00000639841 RTEL1-TNFRSF6BF6WH68 1400 aa9.98□□□□□ -0.81
NECAP1-220ENST00000639841 TEX2Q8IWB9 1127 aa9.97□□□□□ -0.81
NECAP1-220ENST00000639841 SULF1Q8IWU6 871 aa9.97□□□□□ -0.81
NECAP1-220ENST00000639841 MORC4Q8TE76 937 aa9.97□□□□□ -0.81
NECAP1-220ENST00000639841 TSC1Q92574 1164 aa9.97□□□□□ -0.81
NECAP1-220ENST00000639841 FAM161BQ96MY7 647 aa9.97□□□□□ -0.81
NECAP1-220ENST00000639841 PTPRKQ15262 1439 aa9.97□□□□□ -0.81
NECAP1-220ENST00000639841 POLR1AO95602 1720 aaPredicted RBP9.97□□□□□ -0.81
NECAP1-220ENST00000639841 FDX1P10109 184 aa9.97□□□□□ -0.81
NECAP1-220ENST00000639841 TYW1BQ6NUM6 668 aa9.97□□□□□ -0.81
NECAP1-220ENST00000639841 PPP1R18Q6NYC8 613 aa9.97□□□□□ -0.81
NECAP1-220ENST00000639841 GPATCH8Q9UKJ3 1502 aaKnown RBP9.96□□□□□ -0.81
NECAP1-220ENST00000639841 HOXA2O43364 376 aa9.96□□□□□ -0.81
NECAP1-220ENST00000639841 C21orf2O43822 256 aa9.96□□□□□ -0.81
NECAP1-220ENST00000639841 GUCA2AQ02747 115 aa9.96□□□□□ -0.81
NECAP1-220ENST00000639841 DPYDQ12882 1025 aa9.96□□□□□ -0.81
NECAP1-220ENST00000639841 SLF2Q8IX21 1173 aa9.96□□□□□ -0.81
NECAP1-220ENST00000639841 CCSER2Q9H7U1 834 aa9.96□□□□□ -0.81
NECAP1-220ENST00000639841 DNAJA1P31689 397 aaKnown RBP9.95□□□□□ -0.82
NECAP1-220ENST00000639841 ANAPC15P60006 121 aa9.95□□□□□ -0.82
NECAP1-220ENST00000639841 OCLNQ16625 522 aa9.95□□□□□ -0.82
NECAP1-220ENST00000639841 HLA-CQ95604 372 aa9.95□□□□□ -0.82
NECAP1-220ENST00000639841 CCNB3Q8WWL7 1395 aa9.95□□□□□ -0.82
NECAP1-220ENST00000639841 NCOA4Q13772 614 aa9.95□□□□□ -0.82
NECAP1-220ENST00000639841 EHBP1L1Q8N3D4 1523 aa9.94□□□□□ -0.82
NECAP1-220ENST00000639841 TTLL13PA6NNM8 815 aa9.94□□□□□ -0.82
NECAP1-220ENST00000639841 PRMT3O60678 531 aa9.94□□□□□ -0.82
NECAP1-220ENST00000639841 IBSPP21815 317 aaPredicted RBP9.94□□□□□ -0.82
NECAP1-220ENST00000639841 NR1H3Q13133 447 aa9.94□□□□□ -0.82
NECAP1-220ENST00000639841 ILDR2Q71H61 639 aa9.94□□□□□ -0.82
NECAP1-220ENST00000639841 RNF19AQ9NV58 838 aa9.94□□□□□ -0.82
NECAP1-220ENST00000639841 MAGEC2Q9UBF1 373 aaPredicted RBP9.94□□□□□ -0.82
NECAP1-220ENST00000639841 BOLA1Q9Y3E2 137 aa9.94□□□□□ -0.82
NECAP1-220ENST00000639841 UBAP1LF5GYI3 381 aa9.94□□□□□ -0.82
NECAP1-220ENST00000639841 FBXO45P0C2W1 286 aa9.94□□□□□ -0.82
NECAP1-220ENST00000639841 CXXC1Q9P0U4 656 aaPredicted RBP9.94□□□□□ -0.82
NECAP1-220ENST00000639841 NLRP1Q9C000 1473 aa9.93□□□□□ -0.82
NECAP1-220ENST00000639841 RPUSD2Q8IZ73 545 aaKnown RBP9.93□□□□□ -0.82
NECAP1-220ENST00000639841 PNMA1Q8ND90 353 aa9.93□□□□□ -0.82
NECAP1-220ENST00000639841 PMM1Q92871 262 aa9.93□□□□□ -0.82
NECAP1-220ENST00000639841 EVI5LQ96CN4 794 aa9.93□□□□□ -0.82
NECAP1-220ENST00000639841 EYA1Q99502 592 aa9.93□□□□□ -0.82
NECAP1-220ENST00000639841 OSBPL2Q9H1P3 480 aa9.93□□□□□ -0.82
NECAP1-220ENST00000639841 COL4A3BPQ9Y5P4 624 aa9.93□□□□□ -0.82
NECAP1-220ENST00000639841 MRPL42Q9Y6G3 142 aaKnown RBP9.93□□□□□ -0.82
NECAP1-220ENST00000639841 DEPDC5O75140 1603 aa9.93□□□□□ -0.82
NECAP1-220ENST00000639841 KDM5DQ9BY66 1539 aa9.93□□□□□ -0.82
NECAP1-220ENST00000639841 ATP5J2-PTCD1G3V325 749 aa9.92□□□□□ -0.82
NECAP1-220ENST00000639841 TOM1O60784 492 aa9.92□□□□□ -0.82
NECAP1-220ENST00000639841 MTMR2Q13614 643 aa9.92□□□□□ -0.82
NECAP1-220ENST00000639841 MTMR3Q13615 1198 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms