RNA–Protein interactions for RNA: ENST00000639599.1

TARDBP-231, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 1,283 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-231ENST00000639599 ERVV-2B6SEH9 535 aa20.01■□□□□ 0.79
TARDBP-231ENST00000639599 YBX3P16989 372 aaKnown RBP eCLIP20.01■□□□□ 0.798e-13■□□□□ 8.1
TARDBP-231ENST00000639599 ATG3Q9NT62 314 aa20.01■□□□□ 0.79
TARDBP-231ENST00000639599 RTCBQ9Y3I0 505 aaKnown RBP20■□□□□ 0.79
TARDBP-231ENST00000639599 MTHFSP49914 203 aa19.99■□□□□ 0.79
TARDBP-231ENST00000639599 C1QTNF8P60827 252 aa19.99■□□□□ 0.79
TARDBP-231ENST00000639599 ITPK1Q13572 414 aa19.99■□□□□ 0.79
TARDBP-231ENST00000639599 MAP2P11137 1827 aaKnown RBP19.99■□□□□ 0.79
TARDBP-231ENST00000639599 COL24A1Q17RW2 1714 aa19.99■□□□□ 0.79
TARDBP-231ENST00000639599 TRAPPC3LQ5T215 181 aa19.98■□□□□ 0.79
TARDBP-231ENST00000639599 SMIM5Q71RC9 77 aa19.98■□□□□ 0.79
TARDBP-231ENST00000639599 SULT6B1Q6IMI4 303 aa19.97■□□□□ 0.79
TARDBP-231ENST00000639599 CHD4Q14839 1912 aa19.96■□□□□ 0.79
TARDBP-231ENST00000639599 AMIGO3Q86WK7 504 aa19.96■□□□□ 0.79
TARDBP-231ENST00000639599 WWC3Q9ULE0 1092 aa19.96■□□□□ 0.79
TARDBP-231ENST00000639599 ITGB4P16144 1822 aa19.96■□□□□ 0.79
TARDBP-231ENST00000639599 MMP10P09238 476 aa19.95■□□□□ 0.78
TARDBP-231ENST00000639599 ADRA2BP18089 450 aa19.94■□□□□ 0.78
TARDBP-231ENST00000639599 RFC4P35249 363 aa19.94■□□□□ 0.78
TARDBP-231ENST00000639599 AEBP1Q8IUX7 1158 aa19.94■□□□□ 0.78
TARDBP-231ENST00000639599 TAF1LQ8IZX4 1826 aa19.94■□□□□ 0.78
TARDBP-231ENST00000639599 PTCD1O75127 700 aaKnown RBP19.93■□□□□ 0.78
TARDBP-231ENST00000639599 NLGN1Q8N2Q7 840 aa19.93■□□□□ 0.78
TARDBP-231ENST00000639599 KDRP35968 1356 aa19.92■□□□□ 0.78
TARDBP-231ENST00000639599 RC3H1Q5TC82 1133 aaKnown RBP19.91■□□□□ 0.78
TARDBP-231ENST00000639599 GPBP1L1Q9HC44 474 aaPredicted RBP19.91■□□□□ 0.78
TARDBP-231ENST00000639599 CCDC87Q9NVE4 849 aa19.91■□□□□ 0.78
TARDBP-231ENST00000639599 CNTNAP4Q9C0A0 1308 aa19.91■□□□□ 0.78
TARDBP-231ENST00000639599 PARP3Q9Y6F1 533 aa19.9■□□□□ 0.78
TARDBP-231ENST00000639599 KDM6AO15550 1401 aaPredicted RBP19.9■□□□□ 0.78
TARDBP-231ENST00000639599 RPS6KA4O75676 772 aa19.89■□□□□ 0.77
TARDBP-231ENST00000639599 IL13P35225 146 aa19.89■□□□□ 0.77
TARDBP-231ENST00000639599 KIF7Q2M1P5 1343 aa19.89■□□□□ 0.77
TARDBP-231ENST00000639599 NFATC2IPQ8NCF5 419 aa19.89■□□□□ 0.77
TARDBP-231ENST00000639599 ARHGEF1Q92888 912 aaKnown RBP19.89■□□□□ 0.77
TARDBP-231ENST00000639599 ATP10DQ9P241 1426 aa19.89■□□□□ 0.77
TARDBP-231ENST00000639599 UBR3Q6ZT12 1888 aa19.88■□□□□ 0.77
TARDBP-231ENST00000639599 AKAP4Q5JQC9 854 aa19.88■□□□□ 0.77
TARDBP-231ENST00000639599 ZNF526Q8TF50 670 aaPredicted RBP19.88■□□□□ 0.77
TARDBP-231ENST00000639599 UTRNP46939 3433 aa19.88■□□□□ 0.77
TARDBP-231ENST00000639599 CC2D1BQ5T0F9 858 aaKnown RBP19.87■□□□□ 0.77
TARDBP-231ENST00000639599 TGFB2P61812 414 aa19.86■□□□□ 0.77
TARDBP-231ENST00000639599 CNGB1Q14028 1251 aaPredicted RBP19.86■□□□□ 0.77
TARDBP-231ENST00000639599 AMER1Q5JTC6 1135 aaPredicted RBP19.86■□□□□ 0.77
TARDBP-231ENST00000639599 SLC4A9Q96Q91 983 aa19.86■□□□□ 0.77
TARDBP-231ENST00000639599 DIAPH1O60610 1272 aaKnown RBP19.85■□□□□ 0.77
TARDBP-231ENST00000639599 HMOX1P09601 288 aa19.85■□□□□ 0.77
TARDBP-231ENST00000639599 CRKLP46109 303 aaKnown RBP19.85■□□□□ 0.77
TARDBP-231ENST00000639599 BCS1LQ9Y276 419 aa19.85■□□□□ 0.77
TARDBP-231ENST00000639599 GYS1P13807 737 aa19.83■□□□□ 0.77
TARDBP-231ENST00000639599 SLC52A2Q9HAB3 445 aa19.83■□□□□ 0.77
TARDBP-231ENST00000639599 CICQ96RK0 1608 aaPredicted RBP19.83■□□□□ 0.76
TARDBP-231ENST00000639599 A0A0G2JLW4 131 aa19.81■□□□□ 0.76
TARDBP-231ENST00000639599 ZPR1O75312 459 aa19.81■□□□□ 0.76
TARDBP-231ENST00000639599 PXDNLA1KZ92 1463 aa19.8■□□□□ 0.76
TARDBP-231ENST00000639599 RNMTO43148 476 aaKnown RBP19.8■□□□□ 0.76
TARDBP-231ENST00000639599 FCHSD2O94868 740 aa19.8■□□□□ 0.76
TARDBP-231ENST00000639599 C10orf71Q711Q0 1435 aa19.79■□□□□ 0.76
TARDBP-231ENST00000639599 U2SURPO15042 1029 aaKnown RBP19.79■□□□□ 0.76
TARDBP-231ENST00000639599 ARHGAP27Q6ZUM4 889 aa19.79■□□□□ 0.76
TARDBP-231ENST00000639599 TTC5Q8N0Z6 440 aa19.79■□□□□ 0.76
TARDBP-231ENST00000639599 USP42Q9H9J4 1324 aaKnown RBP19.78■□□□□ 0.76
TARDBP-231ENST00000639599 ZNF831Q5JPB2 1677 aa19.78■□□□□ 0.76
TARDBP-231ENST00000639599 DNAJC10Q8IXB1 793 aa19.78■□□□□ 0.76
TARDBP-231ENST00000639599 SRP68Q9UHB9 627 aaKnown RBP19.78■□□□□ 0.76
TARDBP-231ENST00000639599 ADCY9O60503 1353 aa19.78■□□□□ 0.76
TARDBP-231ENST00000639599 DPEP1P16444 411 aa19.77■□□□□ 0.76
TARDBP-231ENST00000639599 LGR6Q9HBX8 967 aa19.77■□□□□ 0.76
TARDBP-231ENST00000639599 SLC39A6Q13433 755 aa19.76■□□□□ 0.75
TARDBP-231ENST00000639599 MTHFSDQ2M296 383 aaKnown RBP19.76■□□□□ 0.75
TARDBP-231ENST00000639599 TEFQ10587 303 aa19.75■□□□□ 0.75
TARDBP-231ENST00000639599 FKBP8Q14318 412 aa19.75■□□□□ 0.75
TARDBP-231ENST00000639599 GAS2L2Q8NHY3 880 aa19.75■□□□□ 0.75
TARDBP-231ENST00000639599 CFAP53Q96M91 514 aa19.75■□□□□ 0.75
TARDBP-231ENST00000639599 PIM2Q9P1W9 311 aa19.75■□□□□ 0.75
TARDBP-231ENST00000639599 USPL1Q5W0Q7 1092 aa19.74■□□□□ 0.75
TARDBP-231ENST00000639599 NPM2Q86SE8 214 aaKnown RBP19.74■□□□□ 0.75
TARDBP-231ENST00000639599 C4AP0C0L4 1744 aa19.73■□□□□ 0.75
TARDBP-231ENST00000639599 COL5A3P25940 1745 aaPredicted RBP19.73■□□□□ 0.75
TARDBP-231ENST00000639599 PER1O15534 1290 aaPredicted RBP19.73■□□□□ 0.75
TARDBP-231ENST00000639599 DALRD3Q5D0E6 543 aaKnown RBP19.73■□□□□ 0.75
TARDBP-231ENST00000639599 INTS5Q6P9B9 1019 aaKnown RBP19.73■□□□□ 0.75
TARDBP-231ENST00000639599 STARD3NLO95772 234 aa19.72■□□□□ 0.75
TARDBP-231ENST00000639599 SOS1Q07889 1333 aaPredicted RBP19.72■□□□□ 0.75
TARDBP-231ENST00000639599 CYP19A1P11511 503 aaPredicted RBP19.71■□□□□ 0.75
TARDBP-231ENST00000639599 VSIG10Q8N0Z9 540 aa19.71■□□□□ 0.75
TARDBP-231ENST00000639599 MRC1P22897 1456 aa19.71■□□□□ 0.75
TARDBP-231ENST00000639599 COL15A1P39059 1388 aa19.7■□□□□ 0.74
TARDBP-231ENST00000639599 NPC1L1Q9UHC9 1359 aa19.7■□□□□ 0.74
TARDBP-231ENST00000639599 GNAT3A8MTJ3 354 aa19.7■□□□□ 0.74
TARDBP-231ENST00000639599 CANXP27824 592 aaKnown RBP19.7■□□□□ 0.74
TARDBP-231ENST00000639599 DDR1Q08345 913 aa19.7■□□□□ 0.74
TARDBP-231ENST00000639599 NUDCQ9Y266 331 aa19.7■□□□□ 0.74
TARDBP-231ENST00000639599 ZBTB1Q9Y2K1 713 aa19.7■□□□□ 0.74
TARDBP-231ENST00000639599 GOLGB1Q14789 3259 aaKnown RBP19.7■□□□□ 0.74
TARDBP-231ENST00000639599 POLRMTO00411 1230 aaKnown RBP19.69■□□□□ 0.74
TARDBP-231ENST00000639599 NARFQ9UHQ1 456 aa19.69■□□□□ 0.74
TARDBP-231ENST00000639599 ZNF330Q9Y3S2 320 aaPredicted RBP19.69■□□□□ 0.74
TARDBP-231ENST00000639599 A0A087WZG4 1122 aa19.68■□□□□ 0.74
TARDBP-231ENST00000639599 HSPA6P17066 643 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms