RNA–Protein interactions for RNA: ENST00000639247.1

CNTNAP2-225, Transcript of contactin associated protein like 2, humanhuman

TSL 1 (best) BASIC

Gene CNTNAP2, Length 2,064 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP2-225ENST00000639247 MBIPQ9NS73 344 aa18.96■□□□□ 0.63
CNTNAP2-225ENST00000639247 DOT1LQ8TEK3 1739 aa18.96■□□□□ 0.63
CNTNAP2-225ENST00000639247 CABP4P57796 275 aa18.96■□□□□ 0.63
CNTNAP2-225ENST00000639247 NCBP3Q53F19 620 aaKnown RBP18.96■□□□□ 0.63
CNTNAP2-225ENST00000639247 HSP90AB1P08238 724 aaKnown RBP18.95■□□□□ 0.62
CNTNAP2-225ENST00000639247 KRT27Q7Z3Y8 459 aa18.95■□□□□ 0.62
CNTNAP2-225ENST00000639247 FANCIQ9NVI1 1328 aa18.94■□□□□ 0.62
CNTNAP2-225ENST00000639247 ITGB4P16144 1822 aa18.94■□□□□ 0.62
CNTNAP2-225ENST00000639247 ZNF853P0CG23 659 aa18.94■□□□□ 0.62
CNTNAP2-225ENST00000639247 DUSP27Q5VZP5 1158 aa18.94■□□□□ 0.62
CNTNAP2-225ENST00000639247 TAF7Q15545 349 aaPredicted RBP18.94■□□□□ 0.62
CNTNAP2-225ENST00000639247 PIGBQ92521 554 aa18.94■□□□□ 0.62
CNTNAP2-225ENST00000639247 CFAP44Q96MT7 982 aa18.94■□□□□ 0.62
CNTNAP2-225ENST00000639247 SIPA1L3O60292 1781 aaPredicted RBP18.93■□□□□ 0.62
CNTNAP2-225ENST00000639247 BTBD11A6QL63 1104 aa18.93■□□□□ 0.62
CNTNAP2-225ENST00000639247 ELL2O00472 640 aaPredicted RBP18.93■□□□□ 0.62
CNTNAP2-225ENST00000639247 CHL1O00533 1208 aa18.93■□□□□ 0.62
CNTNAP2-225ENST00000639247 IFT57Q9NWB7 429 aa18.93■□□□□ 0.62
CNTNAP2-225ENST00000639247 TSPYL4Q9UJ04 414 aa18.93■□□□□ 0.62
CNTNAP2-225ENST00000639247 E9PSI1 815 aa18.92■□□□□ 0.62
CNTNAP2-225ENST00000639247 TRMT2AQ8IZ69 625 aaKnown RBP18.92■□□□□ 0.62
CNTNAP2-225ENST00000639247 ERVV-2B6SEH9 535 aa18.91■□□□□ 0.62
CNTNAP2-225ENST00000639247 GNAI1P63096 354 aa18.91■□□□□ 0.62
CNTNAP2-225ENST00000639247 TMOD3Q9NYL9 352 aa18.91■□□□□ 0.62
CNTNAP2-225ENST00000639247 ASAP1Q9ULH1 1129 aa18.91■□□□□ 0.62
CNTNAP2-225ENST00000639247 MRC1P22897 1456 aa18.9■□□□□ 0.62
CNTNAP2-225ENST00000639247 IL16Q14005 1332 aa18.9■□□□□ 0.62
CNTNAP2-225ENST00000639247 TSPYL6Q8N831 410 aa18.9■□□□□ 0.62
CNTNAP2-225ENST00000639247 EXOSC9Q06265 439 aaKnown RBP18.89■□□□□ 0.62
CNTNAP2-225ENST00000639247 CALD1Q05682 793 aaKnown RBP18.89■□□□□ 0.61
CNTNAP2-225ENST00000639247 C8orf58Q8NAV2 365 aa18.89■□□□□ 0.61
CNTNAP2-225ENST00000639247 PRAMEF22A3QJZ6 481 aa18.88■□□□□ 0.61
CNTNAP2-225ENST00000639247 MYH16Q9H6N6 1097 aa18.88■□□□□ 0.61
CNTNAP2-225ENST00000639247 SBF2Q86WG5 1849 aa18.88■□□□□ 0.61
CNTNAP2-225ENST00000639247 BCL9O00512 1426 aa18.87■□□□□ 0.61
CNTNAP2-225ENST00000639247 PTCD1O75127 700 aaKnown RBP18.87■□□□□ 0.61
CNTNAP2-225ENST00000639247 ZNF790Q6PG37 636 aa18.87■□□□□ 0.61
CNTNAP2-225ENST00000639247 KDM3BQ7LBC6 1761 aa18.86■□□□□ 0.61
CNTNAP2-225ENST00000639247 TRIM37O94972 964 aa18.86■□□□□ 0.61
CNTNAP2-225ENST00000639247 ATG3Q9NT62 314 aa18.86■□□□□ 0.61
CNTNAP2-225ENST00000639247 ZNF496Q96IT1 587 aaPredicted RBP18.86■□□□□ 0.61
CNTNAP2-225ENST00000639247 TCERG1O14776 1098 aaKnown RBP18.85■□□□□ 0.61
CNTNAP2-225ENST00000639247 KCNQ4P56696 695 aa18.85■□□□□ 0.61
CNTNAP2-225ENST00000639247 EIF4A1P60842 406 aaKnown RBP18.85■□□□□ 0.61
CNTNAP2-225ENST00000639247 FAM196AQ6ZSG2 479 aa18.84■□□□□ 0.61
CNTNAP2-225ENST00000639247 NECTIN2Q92692 538 aa18.84■□□□□ 0.61
CNTNAP2-225ENST00000639247 BTAF1O14981 1849 aa18.82■□□□□ 0.6
CNTNAP2-225ENST00000639247 TTC5Q8N0Z6 440 aa18.81■□□□□ 0.6
CNTNAP2-225ENST00000639247 SLC4A9Q96Q91 983 aa18.81■□□□□ 0.6
CNTNAP2-225ENST00000639247 RBM42Q9BTD8 480 aaKnown RBP18.81■□□□□ 0.6
CNTNAP2-225ENST00000639247 BCL2L13Q9BXK5 485 aa18.81■□□□□ 0.6
CNTNAP2-225ENST00000639247 NHSQ6T4R5 1651 aa18.81■□□□□ 0.6
CNTNAP2-225ENST00000639247 PAPPAQ13219 1627 aa18.8■□□□□ 0.6
CNTNAP2-225ENST00000639247 KCPQ6ZWJ8 1503 aa18.8■□□□□ 0.6
CNTNAP2-225ENST00000639247 TWISTNBQ3B726 338 aaPredicted RBP18.8■□□□□ 0.6
CNTNAP2-225ENST00000639247 VAMP4O75379 141 aa18.79■□□□□ 0.6
CNTNAP2-225ENST00000639247 EIF2S2P20042 333 aaKnown RBP18.78■□□□□ 0.6
CNTNAP2-225ENST00000639247 PIP4K2AP48426 406 aaPredicted RBP18.78■□□□□ 0.6
CNTNAP2-225ENST00000639247 BABAM1Q9NWV8 329 aa18.78■□□□□ 0.6
CNTNAP2-225ENST00000639247 UBR2Q8IWV8 1755 aa18.78■□□□□ 0.6
CNTNAP2-225ENST00000639247 C5P01031 1676 aa18.78■□□□□ 0.6
CNTNAP2-225ENST00000639247 GIGYF1O75420 1035 aaPredicted RBP18.78■□□□□ 0.6
CNTNAP2-225ENST00000639247 BCL11BQ9C0K0 894 aaPredicted RBP18.78■□□□□ 0.6
CNTNAP2-225ENST00000639247 USP16Q9Y5T5 823 aa18.78■□□□□ 0.6
CNTNAP2-225ENST00000639247 PALLDQ8WX93 1383 aa18.77■□□□□ 0.6
CNTNAP2-225ENST00000639247 HEG1Q9ULI3 1381 aa18.77■□□□□ 0.6
CNTNAP2-225ENST00000639247 BCAR3O75815 825 aa18.77■□□□□ 0.59
CNTNAP2-225ENST00000639247 FMNL2Q96PY5 1086 aa18.77■□□□□ 0.59
CNTNAP2-225ENST00000639247 ANXA1P04083 346 aa18.75■□□□□ 0.59
CNTNAP2-225ENST00000639247 CENPBP07199 599 aaPredicted RBP18.75■□□□□ 0.59
CNTNAP2-225ENST00000639247 DNAJC10Q8IXB1 793 aa18.75■□□□□ 0.59
CNTNAP2-225ENST00000639247 SSH1Q8WYL5 1049 aa18.74■□□□□ 0.59
CNTNAP2-225ENST00000639247 RCAN3Q9UKA8 241 aa18.74■□□□□ 0.59
CNTNAP2-225ENST00000639247 LOC102724428A0A0B4J2F2 783 aa18.73■□□□□ 0.59
CNTNAP2-225ENST00000639247 SIK1P57059 783 aa18.73■□□□□ 0.59
CNTNAP2-225ENST00000639247 ITPK1Q13572 414 aa18.73■□□□□ 0.59
CNTNAP2-225ENST00000639247 APBA3O96018 575 aa18.73■□□□□ 0.59
CNTNAP2-225ENST00000639247 RARSP54136 660 aaKnown RBP18.73■□□□□ 0.59
CNTNAP2-225ENST00000639247 SNRPA1P09661 255 aaKnown RBP18.72■□□□□ 0.59
CNTNAP2-225ENST00000639247 ATP6V1AP38606 617 aa18.72■□□□□ 0.59
CNTNAP2-225ENST00000639247 PROSER3Q2NL68 480 aa18.72■□□□□ 0.59
CNTNAP2-225ENST00000639247 ILDR2Q71H61 639 aa18.72■□□□□ 0.59
CNTNAP2-225ENST00000639247 HDGFL1Q5TGJ6 251 aa18.72■□□□□ 0.59
CNTNAP2-225ENST00000639247 PLIN1O60240 522 aa18.71■□□□□ 0.59
CNTNAP2-225ENST00000639247 A1BGP04217 495 aa18.71■□□□□ 0.59
CNTNAP2-225ENST00000639247 SUPT16HQ9Y5B9 1047 aaKnown RBP18.71■□□□□ 0.59
CNTNAP2-225ENST00000639247 SMIM5Q71RC9 77 aa18.7■□□□□ 0.58
CNTNAP2-225ENST00000639247 PROM2Q8N271 834 aa18.7■□□□□ 0.58
CNTNAP2-225ENST00000639247 LRRC4BQ9NT99 713 aa18.7■□□□□ 0.58
CNTNAP2-225ENST00000639247 CHPF2Q9P2E5 772 aa18.7■□□□□ 0.58
CNTNAP2-225ENST00000639247 TNS1Q9HBL0 1735 aaKnown RBP18.7■□□□□ 0.58
CNTNAP2-225ENST00000639247 TJP1Q07157 1748 aa18.69■□□□□ 0.58
CNTNAP2-225ENST00000639247 SMARCC1Q92922 1105 aaPredicted RBP18.69■□□□□ 0.58
CNTNAP2-225ENST00000639247 SMC4Q9NTJ3 1288 aa18.69■□□□□ 0.58
CNTNAP2-225ENST00000639247 G2E3Q7L622 706 aa18.69■□□□□ 0.58
CNTNAP2-225ENST00000639247 CCNL1Q9UK58 526 aaPredicted RBP18.69■□□□□ 0.58
CNTNAP2-225ENST00000639247 TNNQ9UQP3 1299 aa18.69■□□□□ 0.58
CNTNAP2-225ENST00000639247 MYL6BP14649 208 aa18.68■□□□□ 0.58
CNTNAP2-225ENST00000639247 DEFB132Q7Z7B7 95 aa18.68■□□□□ 0.58
CNTNAP2-225ENST00000639247 LINC00116Q8NCU8 138 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms